RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 CYFIP2Q96F07 1278 aa17.98■□□□□ 0.47
HNRNPU-228ENST00000640306 ZNF219Q9P2Y4 722 aaPredicted RBP17.98■□□□□ 0.47
HNRNPU-228ENST00000640306 BTNL10A8MVZ5 291 aa17.98■□□□□ 0.47
HNRNPU-228ENST00000640306 HOXA7P31268 230 aaPredicted RBP17.98■□□□□ 0.47
HNRNPU-228ENST00000640306 EN1Q05925 392 aaPredicted RBP17.98■□□□□ 0.47
HNRNPU-228ENST00000640306 SF3B2Q13435 895 aaKnown RBP17.98■□□□□ 0.47
HNRNPU-228ENST00000640306 DCAF12L1Q5VU92 463 aa17.98■□□□□ 0.47
HNRNPU-228ENST00000640306 COA1Q9GZY4 146 aa17.98■□□□□ 0.47
HNRNPU-228ENST00000640306 ERVK-5Q9HDB9 667 aa17.98■□□□□ 0.47
HNRNPU-228ENST00000640306 FAM107AO95990 144 aa17.97■□□□□ 0.47
HNRNPU-228ENST00000640306 TMC3Q7Z5M5 1100 aa17.97■□□□□ 0.47
HNRNPU-228ENST00000640306 DYDC2Q96IM9 177 aa17.97■□□□□ 0.47
HNRNPU-228ENST00000640306 STXBP5LQ9Y2K9 1186 aa17.97■□□□□ 0.47
HNRNPU-228ENST00000640306 UTP11Q9Y3A2 253 aaKnown RBP17.97■□□□□ 0.47
HNRNPU-228ENST00000640306 TLDC2A0PJX2 215 aa17.97■□□□□ 0.47
HNRNPU-228ENST00000640306 A6NNZ2 444 aa17.97■□□□□ 0.47
HNRNPU-228ENST00000640306 CFBP00751 764 aa17.97■□□□□ 0.47
HNRNPU-228ENST00000640306 CRKP46108 304 aa17.97■□□□□ 0.47
HNRNPU-228ENST00000640306 SPRED3Q2MJR0 410 aa17.97■□□□□ 0.47
HNRNPU-228ENST00000640306 TUBB8Q3ZCM7 444 aa17.97■□□□□ 0.47
HNRNPU-228ENST00000640306 TBC1D10BQ4KMP7 808 aaPredicted RBP17.97■□□□□ 0.47
HNRNPU-228ENST00000640306 CCDC26Q8TAB7 109 aa17.97■□□□□ 0.47
HNRNPU-228ENST00000640306 LMBR1Q8WVP7 490 aa17.97■□□□□ 0.47
HNRNPU-228ENST00000640306 THAP2Q9H0W7 228 aa17.97■□□□□ 0.47
HNRNPU-228ENST00000640306 METTL14Q9HCE5 456 aaKnown RBP17.97■□□□□ 0.47
HNRNPU-228ENST00000640306 VAV3Q9UKW4 847 aa17.97■□□□□ 0.47
HNRNPU-228ENST00000640306 PHF20L1A8MW92 1017 aa17.96■□□□□ 0.47
HNRNPU-228ENST00000640306 F8VZ95 297 aa17.96■□□□□ 0.47
HNRNPU-228ENST00000640306 NDUFB10O96000 172 aa17.96■□□□□ 0.47
HNRNPU-228ENST00000640306 CRYGNQ8WXF5 182 aa17.96■□□□□ 0.47
HNRNPU-228ENST00000640306 MBOAT7Q96N66 472 aa17.96■□□□□ 0.47
HNRNPU-228ENST00000640306 SUCLA2Q9P2R7 463 aaPredicted RBP17.96■□□□□ 0.47
HNRNPU-228ENST00000640306 ADAMTSL1Q8N6G6 1762 aa17.96■□□□□ 0.47
HNRNPU-228ENST00000640306 SMCHD1A6NHR9 2005 aa17.96■□□□□ 0.47
HNRNPU-228ENST00000640306 KRT13P13646 458 aa17.96■□□□□ 0.47
HNRNPU-228ENST00000640306 SOX5P35711 763 aa17.96■□□□□ 0.47
HNRNPU-228ENST00000640306 JAG1P78504 1218 aa17.96■□□□□ 0.47
HNRNPU-228ENST00000640306 AP3B2Q13367 1082 aa17.96■□□□□ 0.47
HNRNPU-228ENST00000640306 BANK1Q8NDB2 785 aa17.96■□□□□ 0.47
HNRNPU-228ENST00000640306 IPO4Q8TEX9 1081 aaKnown RBP17.96■□□□□ 0.47
HNRNPU-228ENST00000640306 CTNNBL1Q8WYA6 563 aaPredicted RBP17.96■□□□□ 0.47
HNRNPU-228ENST00000640306 CALR3Q96L12 384 aaKnown RBP17.96■□□□□ 0.47
HNRNPU-228ENST00000640306 PKD2L1Q9P0L9 805 aa17.96■□□□□ 0.47
HNRNPU-228ENST00000640306 SLC12A6Q9UHW9 1150 aa17.96■□□□□ 0.47
HNRNPU-228ENST00000640306 SHBGP04278 402 aa17.95■□□□□ 0.46
HNRNPU-228ENST00000640306 FERP16591 822 aa17.95■□□□□ 0.46
HNRNPU-228ENST00000640306 FNTAP49354 379 aa17.95■□□□□ 0.46
HNRNPU-228ENST00000640306 UBAP2Q5T6F2 1119 aaKnown RBP17.95■□□□□ 0.46
HNRNPU-228ENST00000640306 ZNF746Q6NUN9 644 aaPredicted RBP17.95■□□□□ 0.46
HNRNPU-228ENST00000640306 SLFN11Q7Z7L1 901 aa17.95■□□□□ 0.46
HNRNPU-228ENST00000640306 HES6Q96HZ4 224 aa17.95■□□□□ 0.46
HNRNPU-228ENST00000640306 SNX24Q9Y343 169 aa17.95■□□□□ 0.46
HNRNPU-228ENST00000640306 ZMYM2Q9UBW7 1377 aa17.95■□□□□ 0.46
HNRNPU-228ENST00000640306 GMNCA6NCL1 334 aa17.95■□□□□ 0.46
HNRNPU-228ENST00000640306 TISP43B9A030 160 aa17.95■□□□□ 0.46
HNRNPU-228ENST00000640306 CCDC188H7C350 402 aa17.95■□□□□ 0.46
HNRNPU-228ENST00000640306 CES2O00748 559 aa17.95■□□□□ 0.46
HNRNPU-228ENST00000640306 OPLAHO14841 1288 aa17.95■□□□□ 0.46
HNRNPU-228ENST00000640306 PSMC2P35998 433 aaKnown RBP17.95■□□□□ 0.46
HNRNPU-228ENST00000640306 FMO5P49326 533 aa17.95■□□□□ 0.46
HNRNPU-228ENST00000640306 PLTPP55058 493 aa17.95■□□□□ 0.46
HNRNPU-228ENST00000640306 LRIG3Q6UXM1 1119 aa17.95■□□□□ 0.46
HNRNPU-228ENST00000640306 MICALCLQ6ZW33 695 aa17.95■□□□□ 0.46
HNRNPU-228ENST00000640306 SH3BP5LQ7L8J4 393 aa17.95■□□□□ 0.46
HNRNPU-228ENST00000640306 ARFGAP2Q8N6H7 521 aa17.95■□□□□ 0.46
HNRNPU-228ENST00000640306 MMP10P09238 476 aa17.95■□□□□ 0.46
HNRNPU-228ENST00000640306 USP8P40818 1118 aa17.95■□□□□ 0.46
HNRNPU-228ENST00000640306 PPP2R2AP63151 447 aa17.95■□□□□ 0.46
HNRNPU-228ENST00000640306 SYCE1Q8N0S2 351 aa17.95■□□□□ 0.46
HNRNPU-228ENST00000640306 OLIG1Q8TAK6 271 aa17.95■□□□□ 0.46
HNRNPU-228ENST00000640306 SLC20A1Q8WUM9 679 aa17.95■□□□□ 0.46
HNRNPU-228ENST00000640306 HOOK2Q96ED9 719 aa17.95■□□□□ 0.46
HNRNPU-228ENST00000640306 SH2D3AQ9BRG2 576 aa17.95■□□□□ 0.46
HNRNPU-228ENST00000640306 GLT8D2Q9H1C3 349 aa17.95■□□□□ 0.46
HNRNPU-228ENST00000640306 PCIF1Q9H4Z3 704 aa17.95■□□□□ 0.46
HNRNPU-228ENST00000640306 DDX20Q9UHI6 824 aaKnown RBP17.95■□□□□ 0.46
HNRNPU-228ENST00000640306 NENFQ9UMX5 172 aa17.95■□□□□ 0.46
HNRNPU-228ENST00000640306 DDX39AO00148 427 aaKnown RBP17.94■□□□□ 0.46
HNRNPU-228ENST00000640306 EYA4O95677 639 aa17.94■□□□□ 0.46
HNRNPU-228ENST00000640306 GUCY2CP25092 1073 aa17.94■□□□□ 0.46
HNRNPU-228ENST00000640306 SREBF1P36956 1147 aa17.94■□□□□ 0.46
HNRNPU-228ENST00000640306 Q4G0T1 1027 aa17.94■□□□□ 0.46
HNRNPU-228ENST00000640306 SYDE2Q5VT97 1194 aa17.94■□□□□ 0.46
HNRNPU-228ENST00000640306 RUFY4Q6ZNE9 571 aa17.94■□□□□ 0.46
HNRNPU-228ENST00000640306 RAPGEF5Q92565 580 aa17.94■□□□□ 0.46
HNRNPU-228ENST00000640306 ALG3Q92685 438 aa17.94■□□□□ 0.46
HNRNPU-228ENST00000640306 CCDC17Q96LX7 622 aa17.94■□□□□ 0.46
HNRNPU-228ENST00000640306 FMO2Q99518 471 aa17.94■□□□□ 0.46
HNRNPU-228ENST00000640306 PNMA2Q9UL42 364 aa17.94■□□□□ 0.46
HNRNPU-228ENST00000640306 COG5Q9UP83 839 aa17.94■□□□□ 0.46
HNRNPU-228ENST00000640306 CAND2O75155 1236 aa17.94■□□□□ 0.46
HNRNPU-228ENST00000640306 TNFAIP3P21580 790 aa17.94■□□□□ 0.46
HNRNPU-228ENST00000640306 MARCKSL1P49006 195 aa17.94■□□□□ 0.46
HNRNPU-228ENST00000640306 MCTP2Q6DN12 878 aa17.94■□□□□ 0.46
HNRNPU-228ENST00000640306 RASGEF1CQ8N431 466 aa17.94■□□□□ 0.46
HNRNPU-228ENST00000640306 DCAF4Q8WV16 495 aa17.94■□□□□ 0.46
HNRNPU-228ENST00000640306 WDR18Q9BV38 432 aa17.94■□□□□ 0.46
HNRNPU-228ENST00000640306 PPP1R12BO60237 982 aaPredicted RBP17.93■□□□□ 0.46
HNRNPU-228ENST00000640306 SLITRK3O94933 977 aa17.93■□□□□ 0.46
HNRNPU-228ENST00000640306 GH2P01242 217 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms