RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 CRYBB1P53674 252 aaPredicted RBP13.97□□□□□ -0.17
CLN6-225ENST00000638144 ZRSR1Q15695 479 aaKnown RBP13.97□□□□□ -0.17
CLN6-225ENST00000638144 OTUD6AQ7L8S5 288 aa13.97□□□□□ -0.17
CLN6-225ENST00000638144 BRAPQ7Z569 592 aa13.97□□□□□ -0.17
CLN6-225ENST00000638144 RTN4RL1Q86UN2 441 aaPredicted RBP13.97□□□□□ -0.17
CLN6-225ENST00000638144 ERMNQ8TAM6 284 aa13.97□□□□□ -0.17
CLN6-225ENST00000638144 PHOSPHO2Q8TCD6 241 aa13.97□□□□□ -0.17
CLN6-225ENST00000638144 SNX29Q8TEQ0 813 aa13.97□□□□□ -0.17
CLN6-225ENST00000638144 SLC7A3Q8WY07 619 aa13.97□□□□□ -0.17
CLN6-225ENST00000638144 MYLIPQ8WY64 445 aa13.97□□□□□ -0.17
CLN6-225ENST00000638144 NLRP4Q96MN2 994 aa13.97□□□□□ -0.17
CLN6-225ENST00000638144 FDXACB1Q9BRP7 624 aaPredicted RBP13.97□□□□□ -0.17
CLN6-225ENST00000638144 DHX33Q9H6R0 707 aaKnown RBP13.97□□□□□ -0.17
CLN6-225ENST00000638144 SLC28A3Q9HAS3 691 aa13.97□□□□□ -0.17
CLN6-225ENST00000638144 ERVK-5Q9HDB9 667 aa13.97□□□□□ -0.17
CLN6-225ENST00000638144 TUFT1Q9NNX1 390 aa13.97□□□□□ -0.17
CLN6-225ENST00000638144 ST3GAL5Q9UNP4 418 aa13.97□□□□□ -0.17
CLN6-225ENST00000638144 COL4A4P53420 1690 aaPredicted RBP13.97□□□□□ -0.17
CLN6-225ENST00000638144 COL4A6Q14031 1691 aa13.96□□□□□ -0.17
CLN6-225ENST00000638144 ENPP3O14638 875 aa13.96□□□□□ -0.17
CLN6-225ENST00000638144 RFC5P40937 340 aa13.96□□□□□ -0.17
CLN6-225ENST00000638144 RARRES1P49788 294 aa13.96□□□□□ -0.17
CLN6-225ENST00000638144 DNM2P50570 870 aa13.96□□□□□ -0.17
CLN6-225ENST00000638144 CEBPZQ03701 1054 aaKnown RBP13.96□□□□□ -0.17
CLN6-225ENST00000638144 GRIN1Q05586 938 aa13.96□□□□□ -0.17
CLN6-225ENST00000638144 SF3A1Q15459 793 aaKnown RBP13.96□□□□□ -0.17
CLN6-225ENST00000638144 DTHD1Q6ZMT9 781 aa13.96□□□□□ -0.17
CLN6-225ENST00000638144 MAEAQ7L5Y9 396 aa13.96□□□□□ -0.17
CLN6-225ENST00000638144 IGSF22Q8N9C0 903 aa13.96□□□□□ -0.17
CLN6-225ENST00000638144 PRPF31Q8WWY3 499 aaKnown RBP13.96□□□□□ -0.17
CLN6-225ENST00000638144 PLIN2Q99541 437 aa13.96□□□□□ -0.17
CLN6-225ENST00000638144 POLR3CQ9BUI4 534 aaPredicted RBP13.96□□□□□ -0.17
CLN6-225ENST00000638144 PRDM12Q9H4Q4 367 aa13.96□□□□□ -0.17
CLN6-225ENST00000638144 POLD4Q9HCU8 107 aa13.96□□□□□ -0.17
CLN6-225ENST00000638144 MTUS1Q9ULD2 1270 aa13.96□□□□□ -0.17
CLN6-225ENST00000638144 COL4A3BPQ9Y5P4 624 aa13.96□□□□□ -0.17
CLN6-225ENST00000638144 CLIC4Q9Y696 253 aa13.96□□□□□ -0.17
CLN6-225ENST00000638144 EPOPA6NHQ4 379 aa13.95□□□□□ -0.18
CLN6-225ENST00000638144 LAD1O00515 517 aa13.95□□□□□ -0.18
CLN6-225ENST00000638144 SRGAP2CP0DJJ0 459 aa13.95□□□□□ -0.18
CLN6-225ENST00000638144 DARSP14868 501 aaKnown RBP13.95□□□□□ -0.18
CLN6-225ENST00000638144 RPA1P27694 616 aa13.95□□□□□ -0.18
CLN6-225ENST00000638144 PRPHP41219 470 aa13.95□□□□□ -0.18
CLN6-225ENST00000638144 GATMP50440 423 aa13.95□□□□□ -0.18
CLN6-225ENST00000638144 PKP1Q13835 747 aa13.95□□□□□ -0.18
CLN6-225ENST00000638144 FOXD4L6Q3SYB3 417 aaPredicted RBP13.95□□□□□ -0.18
CLN6-225ENST00000638144 HAUS3Q68CZ6 603 aa13.95□□□□□ -0.18
CLN6-225ENST00000638144 FOXD4L3Q6VB84 417 aaPredicted RBP13.95□□□□□ -0.18
CLN6-225ENST00000638144 KCNK18Q7Z418 384 aa13.95□□□□□ -0.18
CLN6-225ENST00000638144 USP38Q8NB14 1042 aa13.95□□□□□ -0.18
CLN6-225ENST00000638144 ASAP3Q8TDY4 903 aa13.95□□□□□ -0.18
CLN6-225ENST00000638144 CDX2Q99626 313 aaPredicted RBP13.95□□□□□ -0.18
CLN6-225ENST00000638144 MTRQ99707 1265 aa13.95□□□□□ -0.18
CLN6-225ENST00000638144 ADAM2Q99965 735 aa13.95□□□□□ -0.18
CLN6-225ENST00000638144 MMTAG2Q9BU76 263 aaKnown RBP13.95□□□□□ -0.18
CLN6-225ENST00000638144 ATP6V0A4Q9HBG4 840 aa13.95□□□□□ -0.18
CLN6-225ENST00000638144 GPRC5CQ9NQ84 441 aa13.95□□□□□ -0.18
CLN6-225ENST00000638144 ANKEF1Q9NU02 776 aa13.95□□□□□ -0.18
CLN6-225ENST00000638144 DDX19AQ9NUU7 478 aaKnown RBP13.95□□□□□ -0.18
CLN6-225ENST00000638144 KIAA1024Q9UPX6 916 aa13.95□□□□□ -0.18
CLN6-225ENST00000638144 SQORQ9Y6N5 450 aa13.95□□□□□ -0.18
CLN6-225ENST00000638144 NLRC5Q86WI3 1866 aa13.95□□□□□ -0.18
CLN6-225ENST00000638144 REV3LO60673 3130 aa13.94□□□□□ -0.18
CLN6-225ENST00000638144 DENND3A2RUS2 1198 aa13.94□□□□□ -0.18
CLN6-225ENST00000638144 RFXAPO00287 272 aa13.94□□□□□ -0.18
CLN6-225ENST00000638144 EIF4BP23588 611 aaKnown RBP13.94□□□□□ -0.18
CLN6-225ENST00000638144 MARCKSP29966 332 aaPredicted RBP13.94□□□□□ -0.18
CLN6-225ENST00000638144 TAP1Q03518 808 aa13.94□□□□□ -0.18
CLN6-225ENST00000638144 LAMTOR4Q0VGL1 99 aa13.94□□□□□ -0.18
CLN6-225ENST00000638144 PRUNE2Q8WUY3 3088 aa13.94□□□□□ -0.18
CLN6-225ENST00000638144 PSPC1Q8WXF1 523 aaKnown RBP13.94□□□□□ -0.18
CLN6-225ENST00000638144 TOP1MTQ969P6 601 aa13.94□□□□□ -0.18
CLN6-225ENST00000638144 NACC1Q96RE7 527 aa13.94□□□□□ -0.18
CLN6-225ENST00000638144 YME1L1Q96TA2 773 aa13.94□□□□□ -0.18
CLN6-225ENST00000638144 RAD9AQ99638 391 aa13.94□□□□□ -0.18
CLN6-225ENST00000638144 JPH2Q9BR39 696 aaPredicted RBP13.94□□□□□ -0.18
CLN6-225ENST00000638144 RAB34Q9BZG1 259 aa13.94□□□□□ -0.18
CLN6-225ENST00000638144 POLR3FQ9H1D9 316 aaPredicted RBP13.94□□□□□ -0.18
CLN6-225ENST00000638144 TSPYL2Q9H2G4 693 aaPredicted RBP13.94□□□□□ -0.18
CLN6-225ENST00000638144 MINDY3Q9H8M7 445 aa13.94□□□□□ -0.18
CLN6-225ENST00000638144 KIAA1671Q9BY89 1806 aa13.94□□□□□ -0.18
CLN6-225ENST00000638144 TMEM265A0A087WTH1 108 aa13.93□□□□□ -0.18
CLN6-225ENST00000638144 LINC01553A4QN01 128 aa13.93□□□□□ -0.18
CLN6-225ENST00000638144 ARHGEF35A5YM69 484 aa13.93□□□□□ -0.18
CLN6-225ENST00000638144 E9PMD0 336 aa13.93□□□□□ -0.18
CLN6-225ENST00000638144 GPR182O15218 404 aa13.93□□□□□ -0.18
CLN6-225ENST00000638144 DGAT1O75907 488 aa13.93□□□□□ -0.18
CLN6-225ENST00000638144 PDIA5Q14554 519 aa13.93□□□□□ -0.18
CLN6-225ENST00000638144 PAN2Q504Q3 1202 aaKnown RBP13.93□□□□□ -0.18
CLN6-225ENST00000638144 KRT79Q5XKE5 535 aa13.93□□□□□ -0.18
CLN6-225ENST00000638144 PADI6Q6TGC4 694 aa13.93□□□□□ -0.18
CLN6-225ENST00000638144 RNF149Q8NC42 400 aa13.93□□□□□ -0.18
CLN6-225ENST00000638144 ARNTL2Q8WYA1 636 aa13.93□□□□□ -0.18
CLN6-225ENST00000638144 USP28Q96RU2 1077 aa13.93□□□□□ -0.18
CLN6-225ENST00000638144 FTHL17Q9BXU8 183 aa13.93□□□□□ -0.18
CLN6-225ENST00000638144 GCOM2Q9BZD3 368 aaPredicted RBP13.93□□□□□ -0.18
CLN6-225ENST00000638144 BHMT2Q9H2M3 363 aa13.93□□□□□ -0.18
CLN6-225ENST00000638144 PPME1Q9Y570 386 aa13.93□□□□□ -0.18
CLN6-225ENST00000638144 GLRA2P23416 452 aa13.92□□□□□ -0.18
CLN6-225ENST00000638144 HTRA4P83105 476 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms