RNA–Protein interactions for RNA: ENST00000637686.1

CLN3-261, Transcript of CLN3, battenin, humanhuman

TSL 5

Gene CLN3, Length 533 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-261ENST00000637686 APBB2Q92870 758 aa10.99□□□□□ -0.65
CLN3-261ENST00000637686 SLC9A7Q96T83 725 aa10.99□□□□□ -0.65
CLN3-261ENST00000637686 OSMRQ99650 979 aa10.99□□□□□ -0.65
CLN3-261ENST00000637686 JPH2Q9BR39 696 aaPredicted RBP10.99□□□□□ -0.65
CLN3-261ENST00000637686 RAB34Q9BZG1 259 aa10.99□□□□□ -0.65
CLN3-261ENST00000637686 ADAMTS10Q9H324 1103 aa10.99□□□□□ -0.65
CLN3-261ENST00000637686 ANKEF1Q9NU02 776 aa10.99□□□□□ -0.65
CLN3-261ENST00000637686 SUCLA2Q9P2R7 463 aaPredicted RBP10.99□□□□□ -0.65
CLN3-261ENST00000637686 TFIP11Q9UBB9 837 aaKnown RBP10.99□□□□□ -0.65
CLN3-261ENST00000637686 PPME1Q9Y570 386 aa10.99□□□□□ -0.65
CLN3-261ENST00000637686 SRPRBQ9Y5M8 271 aaKnown RBP10.99□□□□□ -0.65
CLN3-261ENST00000637686 LOXHD1Q8IVV2 1947 aa10.98□□□□□ -0.65
CLN3-261ENST00000637686 VWA3AA6NCI4 1184 aa10.98□□□□□ -0.65
CLN3-261ENST00000637686 XRCC6P12956 609 aaKnown RBP eCLIP10.98□□□□□ -0.65
CLN3-261ENST00000637686 MYOGP15173 224 aa10.98□□□□□ -0.65
CLN3-261ENST00000637686 DNAJB2P25686 324 aa10.98□□□□□ -0.65
CLN3-261ENST00000637686 RARRES1P49788 294 aa10.98□□□□□ -0.65
CLN3-261ENST00000637686 DNM2P50570 870 aa10.98□□□□□ -0.65
CLN3-261ENST00000637686 GPC3P51654 580 aa10.98□□□□□ -0.65
CLN3-261ENST00000637686 FOXD4L6Q3SYB3 417 aaPredicted RBP10.98□□□□□ -0.65
CLN3-261ENST00000637686 AXDND1Q5T1B0 1012 aaPredicted RBP10.98□□□□□ -0.65
CLN3-261ENST00000637686 HAUS3Q68CZ6 603 aa10.98□□□□□ -0.65
CLN3-261ENST00000637686 FOXD4L3Q6VB84 417 aaPredicted RBP10.98□□□□□ -0.65
CLN3-261ENST00000637686 EXOC8Q8IYI6 725 aa10.98□□□□□ -0.65
CLN3-261ENST00000637686 USP38Q8NB14 1042 aa10.98□□□□□ -0.65
CLN3-261ENST00000637686 SNX29Q8TEQ0 813 aa10.98□□□□□ -0.65
CLN3-261ENST00000637686 TMEM40Q8WWA1 233 aa10.98□□□□□ -0.65
CLN3-261ENST00000637686 NLRP7Q8WX94 980 aa10.98□□□□□ -0.65
CLN3-261ENST00000637686 SLC7A3Q8WY07 619 aa10.98□□□□□ -0.65
CLN3-261ENST00000637686 TMEM143Q96AN5 459 aa10.98□□□□□ -0.65
CLN3-261ENST00000637686 AK8Q96MA6 479 aa10.98□□□□□ -0.65
CLN3-261ENST00000637686 CCDC43Q96MW1 224 aaKnown RBP10.98□□□□□ -0.65
CLN3-261ENST00000637686 SCLT1Q96NL6 688 aa10.98□□□□□ -0.65
CLN3-261ENST00000637686 NACC1Q96RE7 527 aa10.98□□□□□ -0.65
CLN3-261ENST00000637686 MMTAG2Q9BU76 263 aaKnown RBP10.98□□□□□ -0.65
CLN3-261ENST00000637686 PBX4Q9BYU1 374 aa10.98□□□□□ -0.65
CLN3-261ENST00000637686 DHX33Q9H6R0 707 aaKnown RBP10.98□□□□□ -0.65
CLN3-261ENST00000637686 PADI3Q9ULW8 664 aa10.98□□□□□ -0.65
CLN3-261ENST00000637686 NOC2LQ9Y3T9 749 aaKnown RBP10.98□□□□□ -0.65
CLN3-261ENST00000637686 STK24Q9Y6E0 443 aa10.98□□□□□ -0.65
CLN3-261ENST00000637686 SZT2Q5T011 3432 aa10.97□□□□□ -0.65
CLN3-261ENST00000637686 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.97□□□□□ -0.65
CLN3-261ENST00000637686 GOLGA6L4A6NEF3 574 aa10.97□□□□□ -0.65
CLN3-261ENST00000637686 PRPF40AO75400 957 aaKnown RBP10.97□□□□□ -0.65
CLN3-261ENST00000637686 RPS6KA5O75582 802 aa10.97□□□□□ -0.65
CLN3-261ENST00000637686 AMHP03971 560 aa10.97□□□□□ -0.65
CLN3-261ENST00000637686 MUTP22033 750 aa10.97□□□□□ -0.65
CLN3-261ENST00000637686 CMA1P23946 247 aa10.97□□□□□ -0.65
CLN3-261ENST00000637686 LONP1P36776 959 aaKnown RBP10.97□□□□□ -0.65
CLN3-261ENST00000637686 ME1P48163 572 aa10.97□□□□□ -0.65
CLN3-261ENST00000637686 CEBPZQ03701 1054 aaKnown RBP10.97□□□□□ -0.65
CLN3-261ENST00000637686 NFX1Q12986 1120 aaKnown RBP10.97□□□□□ -0.65
CLN3-261ENST00000637686 PAK2Q13177 524 aa10.97□□□□□ -0.65
CLN3-261ENST00000637686 EMC2Q15006 297 aa10.97□□□□□ -0.65
CLN3-261ENST00000637686 KLHL40Q2TBA0 621 aa10.97□□□□□ -0.65
CLN3-261ENST00000637686 KRT79Q5XKE5 535 aa10.97□□□□□ -0.65
CLN3-261ENST00000637686 GPR153Q6NV75 609 aa10.97□□□□□ -0.65
CLN3-261ENST00000637686 FAM117BQ6P1L5 589 aa10.97□□□□□ -0.65
CLN3-261ENST00000637686 Q7L0L9 218 aa10.97□□□□□ -0.65
CLN3-261ENST00000637686 FAM228AQ86W67 206 aa10.97□□□□□ -0.65
CLN3-261ENST00000637686 RHPN2Q8IUC4 686 aa10.97□□□□□ -0.65
CLN3-261ENST00000637686 KSR1Q8IVT5 923 aa10.97□□□□□ -0.65
CLN3-261ENST00000637686 HERC6Q8IVU3 1022 aa10.97□□□□□ -0.65
CLN3-261ENST00000637686 MYOCDQ8IZQ8 938 aa10.97□□□□□ -0.65
CLN3-261ENST00000637686 ZNF710Q8N1W2 664 aa10.97□□□□□ -0.65
CLN3-261ENST00000637686 TIFAQ96CG3 184 aa10.97□□□□□ -0.65
CLN3-261ENST00000637686 MTRQ99707 1265 aa10.97□□□□□ -0.65
CLN3-261ENST00000637686 PYM1Q9BRP8 204 aaKnown RBP10.97□□□□□ -0.65
CLN3-261ENST00000637686 TMX1Q9H3N1 280 aa10.97□□□□□ -0.65
CLN3-261ENST00000637686 ERVK-5Q9HDB9 667 aa10.97□□□□□ -0.65
CLN3-261ENST00000637686 MSRAQ9UJ68 235 aa10.97□□□□□ -0.65
CLN3-261ENST00000637686 FBXO2Q9UK22 296 aaPredicted RBP10.97□□□□□ -0.65
CLN3-261ENST00000637686 PCDHA7Q9UN72 937 aa10.97□□□□□ -0.65
CLN3-261ENST00000637686 KIAA1024Q9UPX6 916 aa10.97□□□□□ -0.65
CLN3-261ENST00000637686 YBX2Q9Y2T7 364 aaKnown RBP10.97□□□□□ -0.65
CLN3-261ENST00000637686 MICAL3Q7RTP6 2002 aa10.96□□□□□ -0.65
CLN3-261ENST00000637686 ARID2Q68CP9 1835 aa10.96□□□□□ -0.65
CLN3-261ENST00000637686 A0A087WZ62 844 aa10.96□□□□□ -0.65
CLN3-261ENST00000637686 ARHGEF35A5YM69 484 aa10.96□□□□□ -0.65
CLN3-261ENST00000637686 ENPP3O14638 875 aa10.96□□□□□ -0.65
CLN3-261ENST00000637686 GPR182O15218 404 aa10.96□□□□□ -0.65
CLN3-261ENST00000637686 GAS2O43903 313 aaKnown RBP10.96□□□□□ -0.65
CLN3-261ENST00000637686 USO1O60763 962 aaKnown RBP10.96□□□□□ -0.65
CLN3-261ENST00000637686 CSDE1O75534 798 aaKnown RBP10.96□□□□□ -0.65
CLN3-261ENST00000637686 DGAT1O75907 488 aa10.96□□□□□ -0.65
CLN3-261ENST00000637686 DARSP14868 501 aaKnown RBP10.96□□□□□ -0.65
CLN3-261ENST00000637686 EIF4BP23588 611 aaKnown RBP10.96□□□□□ -0.65
CLN3-261ENST00000637686 MARCKSP29966 332 aaPredicted RBP10.96□□□□□ -0.65
CLN3-261ENST00000637686 CDC42EP1Q00587 391 aa10.96□□□□□ -0.65
CLN3-261ENST00000637686 GRIN1Q05586 938 aa10.96□□□□□ -0.65
CLN3-261ENST00000637686 ZRSR1Q15695 479 aaKnown RBP10.96□□□□□ -0.65
CLN3-261ENST00000637686 RAB30Q15771 203 aa10.96□□□□□ -0.65
CLN3-261ENST00000637686 ZNF697Q5TEC3 545 aa10.96□□□□□ -0.65
CLN3-261ENST00000637686 MAEAQ7L5Y9 396 aa10.96□□□□□ -0.65
CLN3-261ENST00000637686 RTN4RL1Q86UN2 441 aaPredicted RBP10.96□□□□□ -0.65
CLN3-261ENST00000637686 DEFB123Q8N688 67 aa10.96□□□□□ -0.65
CLN3-261ENST00000637686 TCP11Q8WWU5 503 aa10.96□□□□□ -0.65
CLN3-261ENST00000637686 PRPF31Q8WWY3 499 aaKnown RBP10.96□□□□□ -0.65
CLN3-261ENST00000637686 PSPC1Q8WXF1 523 aaKnown RBP10.96□□□□□ -0.65
CLN3-261ENST00000637686 LINC01599Q8WXQ3 324 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms