RNA–Protein interactions for RNA: ENST00000637625.1

CACNA1A-244, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 1,890 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-244ENST00000637625 SLC39A14Q15043 492 aa14.38□□□□□ -0.11
CACNA1A-244ENST00000637625 ARHGAP27Q6ZUM4 889 aa14.38□□□□□ -0.11
CACNA1A-244ENST00000637625 MIGA2Q7L4E1 593 aa14.38□□□□□ -0.11
CACNA1A-244ENST00000637625 MRPS27Q92552 414 aaKnown RBP14.38□□□□□ -0.11
CACNA1A-244ENST00000637625 CLIC6Q96NY7 704 aa14.38□□□□□ -0.11
CACNA1A-244ENST00000637625 SPZ1Q9BXG8 430 aa14.38□□□□□ -0.11
CACNA1A-244ENST00000637625 TNMDQ9H2S6 317 aa14.38□□□□□ -0.11
CACNA1A-244ENST00000637625 DDX19AQ9NUU7 478 aaKnown RBP14.38□□□□□ -0.11
CACNA1A-244ENST00000637625 PHF24Q9UPV7 400 aa14.38□□□□□ -0.11
CACNA1A-244ENST00000637625 SRCAPQ6ZRS2 3230 aa14.37□□□□□ -0.11
CACNA1A-244ENST00000637625 STXBP3O00186 592 aa14.37□□□□□ -0.11
CACNA1A-244ENST00000637625 ADCY3O60266 1144 aa14.37□□□□□ -0.11
CACNA1A-244ENST00000637625 CTSBP07858 339 aa14.37□□□□□ -0.11
CACNA1A-244ENST00000637625 SLC16A2P36021 539 aa14.37□□□□□ -0.11
CACNA1A-244ENST00000637625 SCARA3Q6AZY7 606 aa14.37□□□□□ -0.11
CACNA1A-244ENST00000637625 TXNDC11Q6PKC3 985 aa14.37□□□□□ -0.11
CACNA1A-244ENST00000637625 PIK3AP1Q6ZUJ8 805 aa14.37□□□□□ -0.11
CACNA1A-244ENST00000637625 TMEM179Q6ZVK1 233 aa14.37□□□□□ -0.11
CACNA1A-244ENST00000637625 RRP36Q96EU6 259 aaKnown RBP14.37□□□□□ -0.11
CACNA1A-244ENST00000637625 LZTS2Q9BRK4 669 aa14.37□□□□□ -0.11
CACNA1A-244ENST00000637625 CLSTN2Q9H4D0 955 aa14.37□□□□□ -0.11
CACNA1A-244ENST00000637625 REV1Q9UBZ9 1251 aa14.37□□□□□ -0.11
CACNA1A-244ENST00000637625 SEC63Q9UGP8 760 aaKnown RBP14.37□□□□□ -0.11
CACNA1A-244ENST00000637625 POU3F3P20264 500 aaPredicted RBP14.36□□□□□ -0.11
CACNA1A-244ENST00000637625 NAPAP54920 295 aa14.36□□□□□ -0.11
CACNA1A-244ENST00000637625 ZNF543Q08ER8 600 aa14.36□□□□□ -0.11
CACNA1A-244ENST00000637625 ASPRV1Q53RT3 343 aa14.36□□□□□ -0.11
CACNA1A-244ENST00000637625 RILPL1Q5EBL4 403 aa14.36□□□□□ -0.11
CACNA1A-244ENST00000637625 ADALQ6DHV7 355 aa14.36□□□□□ -0.11
CACNA1A-244ENST00000637625 UNC5AQ6ZN44 842 aa14.36□□□□□ -0.11
CACNA1A-244ENST00000637625 ZBED3Q96IU2 234 aaPredicted RBP14.36□□□□□ -0.11
CACNA1A-244ENST00000637625 FZD9O00144 591 aa14.35□□□□□ -0.11
CACNA1A-244ENST00000637625 SNHG28P0DPA3 235 aa14.35□□□□□ -0.11
CACNA1A-244ENST00000637625 NDUFA8P51970 172 aa14.35□□□□□ -0.11
CACNA1A-244ENST00000637625 AXDND1Q5T1B0 1012 aaPredicted RBP14.35□□□□□ -0.11
CACNA1A-244ENST00000637625 BLIDQ8IZY5 108 aa14.35□□□□□ -0.11
CACNA1A-244ENST00000637625 ATG4CQ96DT6 458 aa14.35□□□□□ -0.11
CACNA1A-244ENST00000637625 NUP88Q99567 741 aaPredicted RBP14.35□□□□□ -0.11
CACNA1A-244ENST00000637625 CCDC86Q9H6F5 360 aaKnown RBP14.35□□□□□ -0.11
CACNA1A-244ENST00000637625 BARHL2Q9NY43 387 aa14.35□□□□□ -0.11
CACNA1A-244ENST00000637625 ATAD5Q96QE3 1844 aa14.35□□□□□ -0.11
CACNA1A-244ENST00000637625 FAM86C2PA6NEL3 165 aa14.35□□□□□ -0.11
CACNA1A-244ENST00000637625 GRIN1Q05586 938 aa14.35□□□□□ -0.11
CACNA1A-244ENST00000637625 AP3B2Q13367 1082 aa14.35□□□□□ -0.11
CACNA1A-244ENST00000637625 SNW1Q13573 536 aaKnown RBP14.35□□□□□ -0.11
CACNA1A-244ENST00000637625 TCEA2Q15560 299 aa14.35□□□□□ -0.11
CACNA1A-244ENST00000637625 SPECC1Q5M775 1068 aa14.35□□□□□ -0.11
CACNA1A-244ENST00000637625 SIAH1Q8IUQ4 282 aa14.35□□□□□ -0.11
CACNA1A-244ENST00000637625 CCDC148Q8NFR7 591 aa14.35□□□□□ -0.11
CACNA1A-244ENST00000637625 HERC5Q9UII4 1024 aaKnown RBP14.35□□□□□ -0.11
CACNA1A-244ENST00000637625 CNOT7Q9UIV1 285 aaKnown RBP14.35□□□□□ -0.11
CACNA1A-244ENST00000637625 DICER1Q9UPY3 1922 aaKnown RBP14.34□□□□□ -0.11
CACNA1A-244ENST00000637625 KINO60870 393 aaKnown RBP14.34□□□□□ -0.11
CACNA1A-244ENST00000637625 PPP6R2O75170 966 aa14.34□□□□□ -0.11
CACNA1A-244ENST00000637625 LETM1O95202 739 aaPredicted RBP14.34□□□□□ -0.11
CACNA1A-244ENST00000637625 PFKFB1P16118 471 aa14.34□□□□□ -0.11
CACNA1A-244ENST00000637625 RPS12P25398 132 aaKnown RBP14.34□□□□□ -0.11
CACNA1A-244ENST00000637625 ZNF280AP59817 542 aaPredicted RBP14.34□□□□□ -0.11
CACNA1A-244ENST00000637625 SLFN13Q68D06 897 aa14.34□□□□□ -0.11
CACNA1A-244ENST00000637625 ERCC4Q92889 916 aaPredicted RBP14.34□□□□□ -0.11
CACNA1A-244ENST00000637625 COA7Q96BR5 231 aa14.34□□□□□ -0.11
CACNA1A-244ENST00000637625 WDR89Q96FK6 387 aaPredicted RBP14.34□□□□□ -0.11
CACNA1A-244ENST00000637625 NYAP2Q9P242 653 aa14.34□□□□□ -0.11
CACNA1A-244ENST00000637625 NOL7Q9UMY1 257 aaKnown RBP14.34□□□□□ -0.11
CACNA1A-244ENST00000637625 G3BP2Q9UN86 482 aaKnown RBP14.34□□□□□ -0.11
CACNA1A-244ENST00000637625 A0A1W2PQ27 194 aa14.33□□□□□ -0.11
CACNA1A-244ENST00000637625 A0A1W2PQ64 194 aa14.33□□□□□ -0.11
CACNA1A-244ENST00000637625 A0A1W2PQD8 194 aa14.33□□□□□ -0.11
CACNA1A-244ENST00000637625 TRIM75PA6NK02 468 aa14.33□□□□□ -0.11
CACNA1A-244ENST00000637625 SLC22A31A6NKX4 558 aa14.33□□□□□ -0.11
CACNA1A-244ENST00000637625 SBF1O95248 1867 aa14.33□□□□□ -0.11
CACNA1A-244ENST00000637625 CALML3P27482 149 aa14.33□□□□□ -0.11
CACNA1A-244ENST00000637625 GSTM4Q03013 218 aa14.33□□□□□ -0.11
CACNA1A-244ENST00000637625 ZNF174Q15697 407 aa14.33□□□□□ -0.11
CACNA1A-244ENST00000637625 KIF4BQ2VIQ3 1234 aa14.33□□□□□ -0.11
CACNA1A-244ENST00000637625 TTC38Q5R3I4 469 aa14.33□□□□□ -0.11
CACNA1A-244ENST00000637625 PSAPL1Q6NUJ1 521 aa14.33□□□□□ -0.11
CACNA1A-244ENST00000637625 SHC4Q6S5L8 630 aa14.33□□□□□ -0.11
CACNA1A-244ENST00000637625 JAMLQ86YT9 394 aa14.33□□□□□ -0.11
CACNA1A-244ENST00000637625 ADGRF4Q8IZF3 695 aa14.33□□□□□ -0.11
CACNA1A-244ENST00000637625 ENGASEQ8NFI3 743 aa14.33□□□□□ -0.11
CACNA1A-244ENST00000637625 SLC7A3Q8WY07 619 aa14.33□□□□□ -0.11
CACNA1A-244ENST00000637625 KLHL6Q8WZ60 621 aa14.33□□□□□ -0.11
CACNA1A-244ENST00000637625 SLC9A7Q96T83 725 aa14.33□□□□□ -0.11
CACNA1A-244ENST00000637625 RIOX1Q9H6W3 641 aa14.33□□□□□ -0.11
CACNA1A-244ENST00000637625 SH3GLB2Q9NR46 395 aa14.33□□□□□ -0.11
CACNA1A-244ENST00000637625 H3BRJ5 948 aa14.33□□□□□ -0.12
CACNA1A-244ENST00000637625 BMP4P12644 408 aa14.33□□□□□ -0.12
CACNA1A-244ENST00000637625 ECE1P42892 770 aa14.33□□□□□ -0.12
CACNA1A-244ENST00000637625 SLC1A4P43007 532 aa14.33□□□□□ -0.12
CACNA1A-244ENST00000637625 CBX2Q14781 532 aaPredicted RBP14.33□□□□□ -0.12
CACNA1A-244ENST00000637625 VHLLQ6RSH7 139 aa14.33□□□□□ -0.12
CACNA1A-244ENST00000637625 FAM83AQ86UY5 434 aa14.33□□□□□ -0.12
CACNA1A-244ENST00000637625 FCHSD1Q86WN1 690 aa14.33□□□□□ -0.12
CACNA1A-244ENST00000637625 FMR1NBQ8N0W7 255 aaPredicted RBP14.33□□□□□ -0.12
CACNA1A-244ENST00000637625 SPICE1Q8N0Z3 855 aa14.33□□□□□ -0.12
CACNA1A-244ENST00000637625 TAB3Q8N5C8 712 aaPredicted RBP14.33□□□□□ -0.12
CACNA1A-244ENST00000637625 FUCA2Q9BTY2 467 aa14.33□□□□□ -0.12
CACNA1A-244ENST00000637625 JMJD4Q9H9V9 463 aa14.33□□□□□ -0.12
CACNA1A-244ENST00000637625 GMIPQ9P107 970 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms