RNA–Protein interactions for RNA: ENST00000637537.1

CLN5-219, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 4

Gene CLN5, Length 2,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-219ENST00000637537 KIF11P52732 1056 aa20.49■□□□□ 0.87
CLN5-219ENST00000637537 GYS2P54840 703 aa20.49■□□□□ 0.87
CLN5-219ENST00000637537 SOX10P56693 466 aa20.49■□□□□ 0.87
CLN5-219ENST00000637537 TTLL12Q14166 644 aaPredicted RBP20.49■□□□□ 0.87
CLN5-219ENST00000637537 ANO5Q75V66 913 aa20.49■□□□□ 0.87
CLN5-219ENST00000637537 C4orf19Q8IY42 314 aa20.49■□□□□ 0.87
CLN5-219ENST00000637537 SYCP3Q8IZU3 236 aa20.49■□□□□ 0.87
CLN5-219ENST00000637537 ANKRD35Q8N283 1001 aa20.49■□□□□ 0.87
CLN5-219ENST00000637537 JAKMIP2Q96AA8 810 aa20.49■□□□□ 0.87
CLN5-219ENST00000637537 GPRASP2Q96D09 838 aa20.49■□□□□ 0.87
CLN5-219ENST00000637537 MOV10L1Q9BXT6 1211 aaKnown RBP20.49■□□□□ 0.87
CLN5-219ENST00000637537 GBP3Q9H0R5 595 aa20.49■□□□□ 0.87
CLN5-219ENST00000637537 LOXHD1Q8IVV2 1947 aa20.48■□□□□ 0.87
CLN5-219ENST00000637537 LMAN1P49257 510 aa20.48■□□□□ 0.87
CLN5-219ENST00000637537 LARSQ9P2J5 1176 aaKnown RBP20.48■□□□□ 0.87
CLN5-219ENST00000637537 GABBR1Q9UBS5 961 aa20.48■□□□□ 0.87
CLN5-219ENST00000637537 PCDHA10Q9Y5I2 948 aa20.48■□□□□ 0.87
CLN5-219ENST00000637537 ENC1O14682 589 aa20.48■□□□□ 0.87
CLN5-219ENST00000637537 SP2Q02086 613 aa20.48■□□□□ 0.87
CLN5-219ENST00000637537 LONRF2Q1L5Z9 754 aa20.48■□□□□ 0.87
CLN5-219ENST00000637537 TDRD12Q587J7 1177 aaKnown RBP20.48■□□□□ 0.87
CLN5-219ENST00000637537 HGSNATQ68CP4 663 aa20.48■□□□□ 0.87
CLN5-219ENST00000637537 HS2ST1Q7LGA3 356 aa20.48■□□□□ 0.87
CLN5-219ENST00000637537 FAM186BQ8IYM0 893 aa20.48■□□□□ 0.87
CLN5-219ENST00000637537 PAGR1Q9BTK6 254 aa20.48■□□□□ 0.87
CLN5-219ENST00000637537 HAUS4Q9H6D7 363 aa20.48■□□□□ 0.87
CLN5-219ENST00000637537 LCTP09848 1927 aa20.47■□□□□ 0.87
CLN5-219ENST00000637537 MACROD2A1Z1Q3 448 aa20.47■□□□□ 0.87
CLN5-219ENST00000637537 CTAGE9A4FU28 777 aa20.47■□□□□ 0.87
CLN5-219ENST00000637537 CCDC151A5D8V7 595 aa20.47■□□□□ 0.87
CLN5-219ENST00000637537 AKR1B10O60218 316 aa20.47■□□□□ 0.87
CLN5-219ENST00000637537 ZNF862O60290 1169 aa20.47■□□□□ 0.87
CLN5-219ENST00000637537 PPP1R37O75864 691 aa20.47■□□□□ 0.87
CLN5-219ENST00000637537 LYPLA2O95372 231 aa20.47■□□□□ 0.87
CLN5-219ENST00000637537 SFNP31947 248 aa20.47■□□□□ 0.87
CLN5-219ENST00000637537 GFPT1Q06210 699 aaPredicted RBP20.47■□□□□ 0.87
CLN5-219ENST00000637537 RAPGEF1Q13905 1077 aa20.47■□□□□ 0.87
CLN5-219ENST00000637537 FAM102BQ5T8I3 360 aa20.47■□□□□ 0.87
CLN5-219ENST00000637537 SWSAP1Q6NVH7 229 aa20.47■□□□□ 0.87
CLN5-219ENST00000637537 LBX2Q6XYB7 198 aa20.47■□□□□ 0.87
CLN5-219ENST00000637537 BORCS6Q96GS4 357 aa20.47■□□□□ 0.87
CLN5-219ENST00000637537 STRA6Q9BX79 667 aa20.47■□□□□ 0.87
CLN5-219ENST00000637537 GANQ9H2C0 597 aa20.47■□□□□ 0.87
CLN5-219ENST00000637537 PCIF1Q9H4Z3 704 aa20.47■□□□□ 0.87
CLN5-219ENST00000637537 IREB2P48200 963 aaKnown RBP20.47■□□□□ 0.87
CLN5-219ENST00000637537 PEX3P56589 373 aa20.47■□□□□ 0.87
CLN5-219ENST00000637537 XRRA1Q6P2D8 792 aa20.47■□□□□ 0.87
CLN5-219ENST00000637537 WDR81Q562E7 1941 aa20.46■□□□□ 0.87
CLN5-219ENST00000637537 SLC16A3O15427 465 aaKnown RBP20.46■□□□□ 0.87
CLN5-219ENST00000637537 PON1P27169 355 aa20.46■□□□□ 0.87
CLN5-219ENST00000637537 PSMC2P35998 433 aaKnown RBP20.46■□□□□ 0.87
CLN5-219ENST00000637537 BRD3Q15059 726 aa20.46■□□□□ 0.87
CLN5-219ENST00000637537 SPA17Q15506 151 aa20.46■□□□□ 0.87
CLN5-219ENST00000637537 EXOC3L4Q17RC7 722 aa20.46■□□□□ 0.87
CLN5-219ENST00000637537 STXBP4Q6ZWJ1 553 aa20.46■□□□□ 0.87
CLN5-219ENST00000637537 FAM133AQ8N9E0 248 aa20.46■□□□□ 0.87
CLN5-219ENST00000637537 CDCA5Q96FF9 252 aa20.46■□□□□ 0.87
CLN5-219ENST00000637537 KIFC3Q9BVG8 833 aa20.46■□□□□ 0.87
CLN5-219ENST00000637537 IFIH1Q9BYX4 1025 aaKnown RBP20.46■□□□□ 0.87
CLN5-219ENST00000637537 JPH1Q9HDC5 661 aaPredicted RBP20.46■□□□□ 0.87
CLN5-219ENST00000637537 MYPNQ86TC9 1320 aa20.46■□□□□ 0.87
CLN5-219ENST00000637537 SLC16A4O15374 487 aa20.46■□□□□ 0.87
CLN5-219ENST00000637537 PLS3P13797 630 aa20.46■□□□□ 0.87
CLN5-219ENST00000637537 SFMBT2Q5VUG0 894 aa20.46■□□□□ 0.87
CLN5-219ENST00000637537 ZNF746Q6NUN9 644 aaPredicted RBP20.46■□□□□ 0.87
CLN5-219ENST00000637537 DPY19L2P1Q6NXN4 242 aa20.46■□□□□ 0.87
CLN5-219ENST00000637537 GOLGA1Q92805 767 aa20.46■□□□□ 0.87
CLN5-219ENST00000637537 METTL14Q9HCE5 456 aaKnown RBP20.46■□□□□ 0.87
CLN5-219ENST00000637537 RPS6KA5O75582 802 aa20.45■□□□□ 0.86
CLN5-219ENST00000637537 TRIM49P0CI25 452 aa20.45■□□□□ 0.86
CLN5-219ENST00000637537 TRIM49CP0CI26 452 aa20.45■□□□□ 0.86
CLN5-219ENST00000637537 GJB7Q6PEY0 223 aa20.45■□□□□ 0.86
CLN5-219ENST00000637537 SEPT14Q6ZU15 432 aa20.45■□□□□ 0.86
CLN5-219ENST00000637537 NCAPG2Q86XI2 1143 aa20.45■□□□□ 0.86
CLN5-219ENST00000637537 CCDC60Q8IWA6 550 aaPredicted RBP20.45■□□□□ 0.86
CLN5-219ENST00000637537 MSL3Q8N5Y2 521 aaKnown RBP20.45■□□□□ 0.86
CLN5-219ENST00000637537 ZSWIM2Q8NEG5 633 aa20.45■□□□□ 0.86
CLN5-219ENST00000637537 NAPGQ99747 312 aaPredicted RBP20.45■□□□□ 0.86
CLN5-219ENST00000637537 PCDHA13Q9Y5I0 950 aa20.45■□□□□ 0.86
CLN5-219ENST00000637537 TULP1O00294 542 aaPredicted RBP20.45■□□□□ 0.86
CLN5-219ENST00000637537 KRT86O43790 486 aa20.45■□□□□ 0.86
CLN5-219ENST00000637537 IVLP07476 585 aa20.45■□□□□ 0.86
CLN5-219ENST00000637537 ZNF526Q8TF50 670 aaPredicted RBP20.45■□□□□ 0.86
CLN5-219ENST00000637537 EDEM3Q9BZQ6 932 aa20.45■□□□□ 0.86
CLN5-219ENST00000637537 GCNT4Q9P109 453 aa20.45■□□□□ 0.86
CLN5-219ENST00000637537 HDAC6Q9UBN7 1215 aa20.45■□□□□ 0.86
CLN5-219ENST00000637537 SLC9A2Q9UBY0 812 aa20.45■□□□□ 0.86
CLN5-219ENST00000637537 PUF60Q9UHX1 559 aaKnown RBP20.45■□□□□ 0.86
CLN5-219ENST00000637537 AJAP1Q9UKB5 411 aaPredicted RBP20.45■□□□□ 0.86
CLN5-219ENST00000637537 MAFGO15525 162 aa20.44■□□□□ 0.86
CLN5-219ENST00000637537 EXOC3O60645 756 aa20.44■□□□□ 0.86
CLN5-219ENST00000637537 UCHL3P15374 230 aa20.44■□□□□ 0.86
CLN5-219ENST00000637537 VAV2P52735 878 aa20.44■□□□□ 0.86
CLN5-219ENST00000637537 EAPPQ56P03 285 aaPredicted RBP20.44■□□□□ 0.86
CLN5-219ENST00000637537 HNRNPLLQ8WVV9 542 aaKnown RBP20.44■□□□□ 0.86
CLN5-219ENST00000637537 EPHX2P34913 555 aa20.44■□□□□ 0.86
CLN5-219ENST00000637537 ACTR2P61160 394 aa20.44■□□□□ 0.86
CLN5-219ENST00000637537 ASTE1Q2TB18 679 aaPredicted RBP20.44■□□□□ 0.86
CLN5-219ENST00000637537 DPY19L2Q6NUT2 758 aa20.44■□□□□ 0.86
CLN5-219ENST00000637537 CYFIP1Q7L576 1253 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms