RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 SLC7A3Q8WY07 619 aa21.25■□□□□ 0.99
CLN6-221ENST00000637494 ZNF668Q96K58 619 aaPredicted RBP21.25■□□□□ 0.99
CLN6-221ENST00000637494 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.24■□□□□ 0.99
CLN6-221ENST00000637494 EML1O00423 815 aa21.24■□□□□ 0.99
CLN6-221ENST00000637494 GRM6O15303 877 aa21.24■□□□□ 0.99
CLN6-221ENST00000637494 JAK2O60674 1132 aa21.24■□□□□ 0.99
CLN6-221ENST00000637494 MAFO75444 373 aaPredicted RBP21.24■□□□□ 0.99
CLN6-221ENST00000637494 LINC00271P0C7V0 271 aa21.24■□□□□ 0.99
CLN6-221ENST00000637494 KCNA5P22460 613 aa21.24■□□□□ 0.99
CLN6-221ENST00000637494 FOSBP53539 338 aa21.24■□□□□ 0.99
CLN6-221ENST00000637494 CALCRLQ16602 461 aa21.24■□□□□ 0.99
CLN6-221ENST00000637494 PUS10Q3MIT2 529 aaKnown RBP21.24■□□□□ 0.99
CLN6-221ENST00000637494 ABI1Q8IZP0 508 aa21.24■□□□□ 0.99
CLN6-221ENST00000637494 CEP170P1Q96L14 293 aa21.24■□□□□ 0.99
CLN6-221ENST00000637494 ZSCAN31Q96LW9 406 aaPredicted RBP21.24■□□□□ 0.99
CLN6-221ENST00000637494 CYP26B1Q9NR63 512 aa21.24■□□□□ 0.99
CLN6-221ENST00000637494 DACT1Q9NYF0 836 aa21.24■□□□□ 0.99
CLN6-221ENST00000637494 SUCLA2Q9P2R7 463 aaPredicted RBP21.24■□□□□ 0.99
CLN6-221ENST00000637494 PLAGL2Q9UPG8 496 aa21.24■□□□□ 0.99
CLN6-221ENST00000637494 IGKV6-21A0A0C4DH24 114 aa21.23■□□□□ 0.99
CLN6-221ENST00000637494 TMEM150BA6NC51 233 aa21.23■□□□□ 0.99
CLN6-221ENST00000637494 BTBD18B2RXH4 712 aa21.23■□□□□ 0.99
CLN6-221ENST00000637494 SFPQP23246 707 aaKnown RBP eCLIP21.23■□□□□ 0.99
CLN6-221ENST00000637494 GATMP50440 423 aa21.23■□□□□ 0.99
CLN6-221ENST00000637494 POLGP54098 1239 aaPredicted RBP21.23■□□□□ 0.99
CLN6-221ENST00000637494 FAM189BP81408 668 aa21.23■□□□□ 0.99
CLN6-221ENST00000637494 DSC3Q14574 896 aa21.23■□□□□ 0.99
CLN6-221ENST00000637494 CSPP1Q1MSJ5 1256 aa21.23■□□□□ 0.99
CLN6-221ENST00000637494 LEXMQ3ZCV2 418 aa21.23■□□□□ 0.99
CLN6-221ENST00000637494 EARS2Q5JPH6 523 aaKnown RBP21.23■□□□□ 0.99
CLN6-221ENST00000637494 ANO5Q75V66 913 aa21.23■□□□□ 0.99
CLN6-221ENST00000637494 ZNF410Q86VK4 478 aa21.23■□□□□ 0.99
CLN6-221ENST00000637494 RHPN2Q8IUC4 686 aa21.23■□□□□ 0.99
CLN6-221ENST00000637494 HAS1Q92839 578 aa21.23■□□□□ 0.99
CLN6-221ENST00000637494 PABPC5Q96DU9 382 aaKnown RBP21.23■□□□□ 0.99
CLN6-221ENST00000637494 SH2D3AQ9BRG2 576 aa21.23■□□□□ 0.99
CLN6-221ENST00000637494 ALG13Q9NP73 1137 aaKnown RBP21.23■□□□□ 0.99
CLN6-221ENST00000637494 PCDHA12Q9UN75 941 aa21.23■□□□□ 0.99
CLN6-221ENST00000637494 FAM50BQ9Y247 325 aa21.23■□□□□ 0.99
CLN6-221ENST00000637494 CUL9Q8IWT3 2517 aa21.23■□□□□ 0.99
CLN6-221ENST00000637494 STBD1O95210 358 aa21.22■□□□□ 0.99
CLN6-221ENST00000637494 RFC5P40937 340 aa21.22■□□□□ 0.99
CLN6-221ENST00000637494 FAM102BQ5T8I3 360 aa21.22■□□□□ 0.99
CLN6-221ENST00000637494 PLA2G4FQ68DD2 849 aa21.22■□□□□ 0.99
CLN6-221ENST00000637494 CCDC83Q8IWF9 413 aa21.22■□□□□ 0.99
CLN6-221ENST00000637494 C4orf19Q8IY42 314 aa21.22■□□□□ 0.99
CLN6-221ENST00000637494 KLHL23Q8NBE8 558 aa21.22■□□□□ 0.99
CLN6-221ENST00000637494 TNFRSF25Q93038 417 aa21.22■□□□□ 0.99
CLN6-221ENST00000637494 LLPHQ9BRT6 129 aaKnown RBP21.22■□□□□ 0.99
CLN6-221ENST00000637494 LXNQ9BS40 222 aa21.22■□□□□ 0.99
CLN6-221ENST00000637494 ZSWIM4Q9H7M6 989 aa21.22■□□□□ 0.99
CLN6-221ENST00000637494 CLDND1Q9NY35 253 aa21.22■□□□□ 0.99
CLN6-221ENST00000637494 A0A087WZ62 844 aa21.21■□□□□ 0.99
CLN6-221ENST00000637494 FAM205CA6NFA0 338 aa21.21■□□□□ 0.99
CLN6-221ENST00000637494 NEMFO60524 1076 aa21.21■□□□□ 0.99
CLN6-221ENST00000637494 CSPG5O95196 566 aa21.21■□□□□ 0.99
CLN6-221ENST00000637494 DRP2Q13474 957 aa21.21■□□□□ 0.99
CLN6-221ENST00000637494 RNF169Q8NCN4 708 aa21.21■□□□□ 0.99
CLN6-221ENST00000637494 C8orf76Q96K31 380 aa21.21■□□□□ 0.99
CLN6-221ENST00000637494 CCDC43Q96MW1 224 aaKnown RBP21.21■□□□□ 0.99
CLN6-221ENST00000637494 FDXACB1Q9BRP7 624 aaPredicted RBP21.21■□□□□ 0.99
CLN6-221ENST00000637494 TMEM117Q9H0C3 514 aa21.21■□□□□ 0.99
CLN6-221ENST00000637494 CHST12Q9NRB3 414 aa21.21■□□□□ 0.99
CLN6-221ENST00000637494 GAS2O43903 313 aaKnown RBP21.2■□□□□ 0.98
CLN6-221ENST00000637494 ITGB1P05556 798 aa21.2■□□□□ 0.98
CLN6-221ENST00000637494 FGFR1P11362 822 aa21.2■□□□□ 0.98
CLN6-221ENST00000637494 SKIP12755 728 aa21.2■□□□□ 0.98
CLN6-221ENST00000637494 LAG3P18627 525 aa21.2■□□□□ 0.98
CLN6-221ENST00000637494 YWHABP31946 246 aaKnown RBP21.2■□□□□ 0.98
CLN6-221ENST00000637494 HMGN5P82970 282 aaKnown RBP21.2■□□□□ 0.98
CLN6-221ENST00000637494 GNL2Q13823 731 aaKnown RBP21.2■□□□□ 0.98
CLN6-221ENST00000637494 ECHDC2Q86YB7 292 aa21.2■□□□□ 0.98
CLN6-221ENST00000637494 THNSL1Q8IYQ7 743 aa21.2■□□□□ 0.98
CLN6-221ENST00000637494 FAM184AQ8NB25 1140 aa21.2■□□□□ 0.98
CLN6-221ENST00000637494 SPPL3Q8TCT6 385 aa21.2■□□□□ 0.98
CLN6-221ENST00000637494 NEK9Q8TD19 979 aa21.2■□□□□ 0.98
CLN6-221ENST00000637494 POF1BQ8WVV4 589 aa21.2■□□□□ 0.98
CLN6-221ENST00000637494 TCP11Q8WWU5 503 aa21.2■□□□□ 0.98
CLN6-221ENST00000637494 DYDC2Q96IM9 177 aa21.2■□□□□ 0.98
CLN6-221ENST00000637494 NLRP4Q96MN2 994 aa21.2■□□□□ 0.98
CLN6-221ENST00000637494 NECAB3Q96P71 396 aaPredicted RBP21.2■□□□□ 0.98
CLN6-221ENST00000637494 CEP89Q96ST8 783 aa21.2■□□□□ 0.98
CLN6-221ENST00000637494 SH2B1Q9NRF2 756 aaPredicted RBP21.2■□□□□ 0.98
CLN6-221ENST00000637494 TCF20Q9UGU0 1960 aaKnown RBP21.19■□□□□ 0.98
CLN6-221ENST00000637494 EOMESO95936 686 aa21.19■□□□□ 0.98
CLN6-221ENST00000637494 FGFR4P22455 802 aa21.19■□□□□ 0.98
CLN6-221ENST00000637494 NPEPPSP55786 919 aa21.19■□□□□ 0.98
CLN6-221ENST00000637494 CYP4A11Q02928 519 aa21.19■□□□□ 0.98
CLN6-221ENST00000637494 UBE3AQ05086 875 aa21.19■□□□□ 0.98
CLN6-221ENST00000637494 XKR9Q5GH70 373 aa21.19■□□□□ 0.98
CLN6-221ENST00000637494 PTCRAQ6ISU1 281 aaPredicted RBP21.19■□□□□ 0.98
CLN6-221ENST00000637494 CATSPER4Q7RTX7 472 aa21.19■□□□□ 0.98
CLN6-221ENST00000637494 TPH2Q8IWU9 490 aa21.19■□□□□ 0.98
CLN6-221ENST00000637494 LRRC43Q8N309 656 aa21.19■□□□□ 0.98
CLN6-221ENST00000637494 MICAL1Q8TDZ2 1067 aa21.19■□□□□ 0.98
CLN6-221ENST00000637494 PSPC1Q8WXF1 523 aaKnown RBP21.19■□□□□ 0.98
CLN6-221ENST00000637494 IGFLR1Q9H665 355 aa21.19■□□□□ 0.98
CLN6-221ENST00000637494 TTC12Q9H892 705 aaPredicted RBP21.19■□□□□ 0.98
CLN6-221ENST00000637494 TYW1Q9NV66 732 aaKnown RBP21.19■□□□□ 0.98
CLN6-221ENST00000637494 RGL1Q9NZL6 768 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms