RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 SOX5P35711 763 aa17.04■□□□□ 0.32
CLN5-218ENST00000637397 IRX4P78413 519 aa17.04■□□□□ 0.32
CLN5-218ENST00000637397 PDE1BQ01064 536 aa17.04■□□□□ 0.32
CLN5-218ENST00000637397 NXNQ6DKJ4 435 aa17.04■□□□□ 0.32
CLN5-218ENST00000637397 CENPUQ71F23 418 aa17.04■□□□□ 0.32
CLN5-218ENST00000637397 EPM2AIP1Q7L775 607 aaPredicted RBP17.04■□□□□ 0.32
CLN5-218ENST00000637397 TRIM59Q8IWR1 403 aa17.04■□□□□ 0.32
CLN5-218ENST00000637397 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.04■□□□□ 0.32
CLN5-218ENST00000637397 NUP85Q9BW27 656 aa17.04■□□□□ 0.32
CLN5-218ENST00000637397 BCS1LQ9Y276 419 aa17.04■□□□□ 0.32
CLN5-218ENST00000637397 MYOM1P52179 1685 aa17.04■□□□□ 0.32
CLN5-218ENST00000637397 GH2P01242 217 aa17.04■□□□□ 0.32
CLN5-218ENST00000637397 SKIP12755 728 aa17.04■□□□□ 0.32
CLN5-218ENST00000637397 AKR1B1P15121 316 aa17.04■□□□□ 0.32
CLN5-218ENST00000637397 EZH2Q15910 746 aaKnown RBP17.04■□□□□ 0.32
CLN5-218ENST00000637397 MAP3K21Q5TCX8 1036 aa17.04■□□□□ 0.32
CLN5-218ENST00000637397 ZNF34Q8IZ26 560 aa17.04■□□□□ 0.32
CLN5-218ENST00000637397 ANKS1AQ92625 1134 aa17.04■□□□□ 0.32
CLN5-218ENST00000637397 ARL8AQ96BM9 186 aa17.04■□□□□ 0.32
CLN5-218ENST00000637397 SLC24A3Q9HC58 644 aa17.04■□□□□ 0.32
CLN5-218ENST00000637397 PNMA2Q9UL42 364 aa17.04■□□□□ 0.32
CLN5-218ENST00000637397 EIF4E1BA6NMX2 242 aaKnown RBP17.03■□□□□ 0.32
CLN5-218ENST00000637397 PPP2R5CQ13362 524 aa17.03■□□□□ 0.32
CLN5-218ENST00000637397 RBBP5Q15291 538 aaKnown RBP17.03■□□□□ 0.32
CLN5-218ENST00000637397 HP1BP3Q5SSJ5 553 aaPredicted RBP17.03■□□□□ 0.32
CLN5-218ENST00000637397 CC2D2BQ6DHV5 1058 aa17.03■□□□□ 0.32
CLN5-218ENST00000637397 NUF2Q9BZD4 464 aa17.03■□□□□ 0.32
CLN5-218ENST00000637397 VWDEQ8N2E2 1590 aa17.03■□□□□ 0.32
CLN5-218ENST00000637397 LOC102724159A0A0B4J2E5 919 aa17.03■□□□□ 0.32
CLN5-218ENST00000637397 PWP2Q15269 919 aaKnown RBP17.03■□□□□ 0.32
CLN5-218ENST00000637397 PPP1R18Q6NYC8 613 aa17.03■□□□□ 0.32
CLN5-218ENST00000637397 C1orf54Q8WWF1 131 aa17.03■□□□□ 0.32
CLN5-218ENST00000637397 TGS1Q96RS0 853 aaKnown RBP17.03■□□□□ 0.32
CLN5-218ENST00000637397 HERVK_113P62684 666 aa17.03■□□□□ 0.32
CLN5-218ENST00000637397 MAP7Q14244 749 aa17.03■□□□□ 0.32
CLN5-218ENST00000637397 PAPD7Q5XG87 772 aaKnown RBP17.03■□□□□ 0.32
CLN5-218ENST00000637397 MAP7D3Q8IWC1 876 aa17.03■□□□□ 0.32
CLN5-218ENST00000637397 PDIK1LQ8N165 341 aa17.03■□□□□ 0.32
CLN5-218ENST00000637397 IL17RAQ96F46 866 aa17.03■□□□□ 0.32
CLN5-218ENST00000637397 GINM1Q9NU53 330 aa17.03■□□□□ 0.32
CLN5-218ENST00000637397 SCOCQ9UIL1 159 aa17.03■□□□□ 0.32
CLN5-218ENST00000637397 EIF2AK2P19525 551 aaKnown RBP17.03■□□□□ 0.32
CLN5-218ENST00000637397 TBX2Q13207 712 aaPredicted RBP17.03■□□□□ 0.32
CLN5-218ENST00000637397 NAB2Q15742 525 aa17.03■□□□□ 0.32
CLN5-218ENST00000637397 KIAA1755Q5JYT7 1200 aa17.03■□□□□ 0.32
CLN5-218ENST00000637397 USP38Q8NB14 1042 aa17.03■□□□□ 0.32
CLN5-218ENST00000637397 SLC7A3Q8WY07 619 aa17.03■□□□□ 0.32
CLN5-218ENST00000637397 ADAM22Q9P0K1 906 aa17.03■□□□□ 0.32
CLN5-218ENST00000637397 CASQ2O14958 399 aaPredicted RBP17.02■□□□□ 0.32
CLN5-218ENST00000637397 CLGNO14967 610 aa17.02■□□□□ 0.32
CLN5-218ENST00000637397 POLE2P56282 527 aa17.02■□□□□ 0.32
CLN5-218ENST00000637397 SBK1Q52WX2 424 aa17.02■□□□□ 0.32
CLN5-218ENST00000637397 PADI6Q6TGC4 694 aa17.02■□□□□ 0.32
CLN5-218ENST00000637397 CLEC10AQ8IUN9 316 aa17.02■□□□□ 0.32
CLN5-218ENST00000637397 FBXO41Q8TF61 875 aa17.02■□□□□ 0.32
CLN5-218ENST00000637397 FAM167BQ9BTA0 163 aa17.02■□□□□ 0.32
CLN5-218ENST00000637397 CELF4Q9BZC1 486 aaKnown RBP17.02■□□□□ 0.32
CLN5-218ENST00000637397 MCF2LO15068 1137 aa17.02■□□□□ 0.32
CLN5-218ENST00000637397 DCTN3O75935 186 aa17.02■□□□□ 0.32
CLN5-218ENST00000637397 SAT1P21673 171 aa17.02■□□□□ 0.32
CLN5-218ENST00000637397 NMT1P30419 496 aaKnown RBP17.02■□□□□ 0.32
CLN5-218ENST00000637397 DHX34Q14147 1143 aaKnown RBP17.02■□□□□ 0.32
CLN5-218ENST00000637397 CYFIP2Q96F07 1278 aa17.02■□□□□ 0.32
CLN5-218ENST00000637397 ECT2Q9H8V3 914 aa17.02■□□□□ 0.32
CLN5-218ENST00000637397 RGL1Q9NZL6 768 aa17.02■□□□□ 0.32
CLN5-218ENST00000637397 NXF1Q9UBU9 619 aaKnown RBP17.02■□□□□ 0.32
CLN5-218ENST00000637397 BCAP29Q9UHQ4 241 aa17.02■□□□□ 0.32
CLN5-218ENST00000637397 PABPN1LA6NDY0 278 aaKnown RBP17.02■□□□□ 0.31
CLN5-218ENST00000637397 PDXKO00764 312 aa17.02■□□□□ 0.31
CLN5-218ENST00000637397 CHN1P15882 459 aa17.02■□□□□ 0.31
CLN5-218ENST00000637397 SLC35G2Q8TBE7 412 aa17.02■□□□□ 0.31
CLN5-218ENST00000637397 RNF25Q96BH1 459 aaPredicted RBP17.02■□□□□ 0.31
CLN5-218ENST00000637397 FAM81BQ96LP2 452 aa17.02■□□□□ 0.31
CLN5-218ENST00000637397 PRMT1Q99873 361 aaKnown RBP17.02■□□□□ 0.31
CLN5-218ENST00000637397 NCAPGQ9BPX3 1015 aa17.02■□□□□ 0.31
CLN5-218ENST00000637397 DDX23Q9BUQ8 820 aaKnown RBP17.02■□□□□ 0.31
CLN5-218ENST00000637397 HNRNPH1P31943 449 aaKnown RBP17.02■□□□□ 0.31
CLN5-218ENST00000637397 TMEM179Q6ZVK1 233 aa17.02■□□□□ 0.31
CLN5-218ENST00000637397 PASD1Q8IV76 773 aa17.02■□□□□ 0.31
CLN5-218ENST00000637397 FBXL16Q8N461 479 aa17.02■□□□□ 0.31
CLN5-218ENST00000637397 MAML1Q92585 1016 aa17.02■□□□□ 0.31
CLN5-218ENST00000637397 SEC16BQ96JE7 1060 aa17.02■□□□□ 0.31
CLN5-218ENST00000637397 LRRC37BQ96QE4 947 aa17.02■□□□□ 0.31
CLN5-218ENST00000637397 SARSP49591 514 aaKnown RBP17.01■□□□□ 0.31
CLN5-218ENST00000637397 VAMP7P51809 220 aa17.01■□□□□ 0.31
CLN5-218ENST00000637397 ALCAMQ13740 583 aa17.01■□□□□ 0.31
CLN5-218ENST00000637397 TTI2Q6NXR4 508 aa17.01■□□□□ 0.31
CLN5-218ENST00000637397 TRIM50Q86XT4 487 aa17.01■□□□□ 0.31
CLN5-218ENST00000637397 SEPT10Q9P0V9 454 aa17.01■□□□□ 0.31
CLN5-218ENST00000637397 CRCPO75575 148 aa17.01■□□□□ 0.31
CLN5-218ENST00000637397 FAM107AO95990 144 aa17.01■□□□□ 0.31
CLN5-218ENST00000637397 TFAMQ00059 246 aaKnown RBP17.01■□□□□ 0.31
CLN5-218ENST00000637397 DRP2Q13474 957 aa17.01■□□□□ 0.31
CLN5-218ENST00000637397 LRIG3Q6UXM1 1119 aa17.01■□□□□ 0.31
CLN5-218ENST00000637397 NARFQ9UHQ1 456 aa17.01■□□□□ 0.31
CLN5-218ENST00000637397 RAB21Q9UL25 225 aa17.01■□□□□ 0.31
CLN5-218ENST00000637397 SLC12A2P55011 1212 aa17.01■□□□□ 0.31
CLN5-218ENST00000637397 PTGISQ16647 500 aa17.01■□□□□ 0.31
CLN5-218ENST00000637397 RINT1Q6NUQ1 792 aa17.01■□□□□ 0.31
CLN5-218ENST00000637397 AFAP1L2Q8N4X5 818 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms