RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 PUF60Q9UHX1 559 aaKnown RBP12.6□□□□□ -0.39
CLN6-217ENST00000636964 PNMA2Q9UL42 364 aa12.6□□□□□ -0.39
CLN6-217ENST00000636964 LRRIQ3A6PVS8 624 aaPredicted RBP12.59□□□□□ -0.39
CLN6-217ENST00000636964 HIP1RO75146 1068 aa12.59□□□□□ -0.39
CLN6-217ENST00000636964 CCDC175P0C221 793 aa12.59□□□□□ -0.39
CLN6-217ENST00000636964 QARSP47897 775 aaKnown RBP12.59□□□□□ -0.39
CLN6-217ENST00000636964 OAZ1P54368 228 aa12.59□□□□□ -0.39
CLN6-217ENST00000636964 APBA1Q02410 837 aa12.59□□□□□ -0.39
CLN6-217ENST00000636964 ODR4Q5SWX8 454 aa12.59□□□□□ -0.39
CLN6-217ENST00000636964 PADI6Q6TGC4 694 aa12.59□□□□□ -0.39
CLN6-217ENST00000636964 TMTC1Q8IUR5 882 aa12.59□□□□□ -0.39
CLN6-217ENST00000636964 ANKRD35Q8N283 1001 aa12.59□□□□□ -0.39
CLN6-217ENST00000636964 ERGIC2Q96RQ1 377 aa12.59□□□□□ -0.39
CLN6-217ENST00000636964 RBBP6Q7Z6E9 1792 aaKnown RBP12.59□□□□□ -0.39
CLN6-217ENST00000636964 USO1O60763 962 aaKnown RBP12.59□□□□□ -0.39
CLN6-217ENST00000636964 TSR1Q2NL82 804 aaKnown RBP12.59□□□□□ -0.39
CLN6-217ENST00000636964 WDR59Q6PJI9 974 aa12.59□□□□□ -0.39
CLN6-217ENST00000636964 CYP26C1Q6V0L0 522 aa12.59□□□□□ -0.39
CLN6-217ENST00000636964 MSL3Q8N5Y2 521 aaKnown RBP12.59□□□□□ -0.39
CLN6-217ENST00000636964 TTYH3Q9C0H2 523 aa12.59□□□□□ -0.39
CLN6-217ENST00000636964 CETN3O15182 167 aa12.59□□□□□ -0.39
CLN6-217ENST00000636964 COQ9O75208 318 aa12.59□□□□□ -0.39
CLN6-217ENST00000636964 NPEPPSP55786 919 aa12.59□□□□□ -0.39
CLN6-217ENST00000636964 VSNL1P62760 191 aa12.59□□□□□ -0.39
CLN6-217ENST00000636964 PLA2G4FQ68DD2 849 aa12.59□□□□□ -0.39
CLN6-217ENST00000636964 NLRX1Q86UT6 975 aa12.59□□□□□ -0.39
CLN6-217ENST00000636964 FAM178BQ8IXR5 827 aa12.59□□□□□ -0.39
CLN6-217ENST00000636964 SAMD3Q8N6K7 520 aa12.59□□□□□ -0.39
CLN6-217ENST00000636964 ZNF408Q9H9D4 720 aa12.59□□□□□ -0.39
CLN6-217ENST00000636964 SIK3Q9Y2K2 1263 aa12.59□□□□□ -0.39
CLN6-217ENST00000636964 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.59□□□□□ -0.39
CLN6-217ENST00000636964 NF2P35240 595 aa12.58□□□□□ -0.4
CLN6-217ENST00000636964 CASP4P49662 377 aa12.58□□□□□ -0.4
CLN6-217ENST00000636964 NAP1L1P55209 391 aaKnown RBP12.58□□□□□ -0.4
CLN6-217ENST00000636964 GET4Q7L5D6 327 aaPredicted RBP12.58□□□□□ -0.4
CLN6-217ENST00000636964 NCAPG2Q86XI2 1143 aa12.58□□□□□ -0.4
CLN6-217ENST00000636964 MSANTD4Q8NCY6 345 aa12.58□□□□□ -0.4
CLN6-217ENST00000636964 PPM1EQ8WY54 764 aa12.58□□□□□ -0.4
CLN6-217ENST00000636964 TFR2Q9UP52 801 aa12.58□□□□□ -0.4
CLN6-217ENST00000636964 ATP2A1O14983 1001 aa12.58□□□□□ -0.4
CLN6-217ENST00000636964 GAP43P17677 238 aa12.58□□□□□ -0.4
CLN6-217ENST00000636964 YWHABP31946 246 aaKnown RBP12.58□□□□□ -0.4
CLN6-217ENST00000636964 CHMP4BP1P59074 171 aa12.58□□□□□ -0.4
CLN6-217ENST00000636964 KCNV1Q6PIU1 500 aa12.58□□□□□ -0.4
CLN6-217ENST00000636964 LBX2Q6XYB7 198 aa12.58□□□□□ -0.4
CLN6-217ENST00000636964 DAW1Q8N136 415 aa12.58□□□□□ -0.4
CLN6-217ENST00000636964 CEP63Q96MT8 703 aa12.58□□□□□ -0.4
CLN6-217ENST00000636964 CCDC43Q96MW1 224 aaKnown RBP12.58□□□□□ -0.4
CLN6-217ENST00000636964 DNAJC7Q99615 494 aa12.58□□□□□ -0.4
CLN6-217ENST00000636964 PCDHB13Q9Y5F0 798 aa12.58□□□□□ -0.4
CLN6-217ENST00000636964 ASTN1O14525 1302 aa12.58□□□□□ -0.4
CLN6-217ENST00000636964 TGFB1I1O43294 461 aa12.57□□□□□ -0.4
CLN6-217ENST00000636964 POTEJP0CG39 1038 aa12.57□□□□□ -0.4
CLN6-217ENST00000636964 RARRES1P49788 294 aa12.57□□□□□ -0.4
CLN6-217ENST00000636964 KCNMA1Q12791 1236 aa12.57□□□□□ -0.4
CLN6-217ENST00000636964 SWT1Q5T5J6 900 aaKnown RBP12.57□□□□□ -0.4
CLN6-217ENST00000636964 SRGAP1Q7Z6B7 1085 aa12.57□□□□□ -0.4
CLN6-217ENST00000636964 ANKRD13AQ8IZ07 590 aa12.57□□□□□ -0.4
CLN6-217ENST00000636964 FIZ1Q96SL8 496 aa12.57□□□□□ -0.4
CLN6-217ENST00000636964 NUP58Q9BVL2 599 aa12.57□□□□□ -0.4
CLN6-217ENST00000636964 GPRC5CQ9NQ84 441 aa12.57□□□□□ -0.4
CLN6-217ENST00000636964 OLFML3Q9NRN5 406 aa12.57□□□□□ -0.4
CLN6-217ENST00000636964 CLEC11AQ9Y240 323 aa12.57□□□□□ -0.4
CLN6-217ENST00000636964 AKAP3O75969 853 aa12.57□□□□□ -0.4
CLN6-217ENST00000636964 MUTP22033 750 aa12.57□□□□□ -0.4
CLN6-217ENST00000636964 HOXA7P31268 230 aaPredicted RBP12.57□□□□□ -0.4
CLN6-217ENST00000636964 EDRF1Q3B7T1 1238 aa12.57□□□□□ -0.4
CLN6-217ENST00000636964 USP50Q70EL3 339 aaPredicted RBP12.57□□□□□ -0.4
CLN6-217ENST00000636964 ZNF720Q7Z2F6 126 aa12.57□□□□□ -0.4
CLN6-217ENST00000636964 HDXQ7Z353 690 aa12.57□□□□□ -0.4
CLN6-217ENST00000636964 ERO1BQ86YB8 467 aa12.57□□□□□ -0.4
CLN6-217ENST00000636964 INPP4AQ96PE3 977 aaPredicted RBP12.57□□□□□ -0.4
CLN6-217ENST00000636964 NLRC4Q9NPP4 1024 aa12.57□□□□□ -0.4
CLN6-217ENST00000636964 TRAF3IP3Q9Y228 551 aa12.57□□□□□ -0.4
CLN6-217ENST00000636964 WDR64B1ANS9 1081 aa12.57□□□□□ -0.4
CLN6-217ENST00000636964 PDXKO00764 312 aa12.57□□□□□ -0.4
CLN6-217ENST00000636964 BACH1O14867 736 aa12.57□□□□□ -0.4
CLN6-217ENST00000636964 CALUO43852 315 aaPredicted RBP12.57□□□□□ -0.4
CLN6-217ENST00000636964 NR3C1P04150 777 aa12.57□□□□□ -0.4
CLN6-217ENST00000636964 PLEKP08567 350 aaPredicted RBP12.57□□□□□ -0.4
CLN6-217ENST00000636964 FECHP22830 423 aa12.57□□□□□ -0.4
CLN6-217ENST00000636964 ZBED6P86452 979 aa12.57□□□□□ -0.4
CLN6-217ENST00000636964 MAPK7Q13164 816 aa12.57□□□□□ -0.4
CLN6-217ENST00000636964 CASP8Q14790 479 aa12.57□□□□□ -0.4
CLN6-217ENST00000636964 SETDB1Q15047 1291 aa12.57□□□□□ -0.4
CLN6-217ENST00000636964 TCERG1LQ5VWI1 586 aa12.57□□□□□ -0.4
CLN6-217ENST00000636964 TRIM59Q8IWR1 403 aa12.57□□□□□ -0.4
CLN6-217ENST00000636964 NEK9Q8TD19 979 aa12.57□□□□□ -0.4
CLN6-217ENST00000636964 TYW1Q9NV66 732 aaKnown RBP12.57□□□□□ -0.4
CLN6-217ENST00000636964 EPN1Q9Y6I3 576 aaPredicted RBP12.57□□□□□ -0.4
CLN6-217ENST00000636964 SYF2O95926 243 aaKnown RBP12.56□□□□□ -0.4
CLN6-217ENST00000636964 PPATQ06203 517 aa12.56□□□□□ -0.4
CLN6-217ENST00000636964 XKR9Q5GH70 373 aa12.56□□□□□ -0.4
CLN6-217ENST00000636964 DCAF17Q5H9S7 520 aaPredicted RBP12.56□□□□□ -0.4
CLN6-217ENST00000636964 SEPT14Q6ZU15 432 aa12.56□□□□□ -0.4
CLN6-217ENST00000636964 RRAGAQ7L523 313 aa12.56□□□□□ -0.4
CLN6-217ENST00000636964 EEPD1Q7L9B9 569 aa12.56□□□□□ -0.4
CLN6-217ENST00000636964 OPTNQ96CV9 577 aa12.56□□□□□ -0.4
CLN6-217ENST00000636964 ASCC2Q9H1I8 757 aaPredicted RBP12.56□□□□□ -0.4
CLN6-217ENST00000636964 FAM204AQ9H8W3 233 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms