RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 FLAD1Q8NFF5 587 aa6.4□□□□□ -1.39
SCN1A-212ENST00000636194 ARMC7Q9H6L4 198 aa6.4□□□□□ -1.39
SCN1A-212ENST00000636194 SAE1Q9UBE0 346 aaPredicted RBP6.4□□□□□ -1.39
SCN1A-212ENST00000636194 FRMD3A2A2Y4 597 aa6.4□□□□□ -1.39
SCN1A-212ENST00000636194 CUTAO60888 179 aa6.4□□□□□ -1.39
SCN1A-212ENST00000636194 IFNA14P01570 189 aa6.4□□□□□ -1.39
SCN1A-212ENST00000636194 ST8SIA6P61647 398 aa6.4□□□□□ -1.39
SCN1A-212ENST00000636194 FAPQ12884 760 aa6.4□□□□□ -1.39
SCN1A-212ENST00000636194 NCF4Q15080 339 aa6.4□□□□□ -1.39
SCN1A-212ENST00000636194 AASDHQ4L235 1098 aaPredicted RBP6.4□□□□□ -1.39
SCN1A-212ENST00000636194 PLA2G4DQ86XP0 818 aa6.4□□□□□ -1.39
SCN1A-212ENST00000636194 PDIK1LQ8N165 341 aa6.4□□□□□ -1.39
SCN1A-212ENST00000636194 RFT1Q96AA3 541 aa6.4□□□□□ -1.39
SCN1A-212ENST00000636194 TSC22D3Q99576 134 aa6.4□□□□□ -1.39
SCN1A-212ENST00000636194 MT-ND3P03897 115 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 POLR2MP0CAP2 368 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 CCDC166P0CW27 439 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 GTF2E2P29084 291 aaKnown RBP6.39□□□□□ -1.39
SCN1A-212ENST00000636194 TGFBR2P37173 567 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 APOA5Q6Q788 366 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 NELFBQ8WX92 580 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 LSM14BQ9BX40 385 aaKnown RBP6.39□□□□□ -1.39
SCN1A-212ENST00000636194 FTOQ9C0B1 505 aaKnown RBP eCLIP6.39□□□□□ -1.39
SCN1A-212ENST00000636194 LRWD1Q9UFC0 647 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 TALDO1P37837 337 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 PTPN9P43378 593 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 SKP1P63208 163 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 EHHADHQ08426 723 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 PUDPQ08623 228 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 XKR9Q5GH70 373 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 RRAGAQ7L523 313 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 ZC3H18Q86VM9 953 aaKnown RBP6.39□□□□□ -1.39
SCN1A-212ENST00000636194 RMND5BQ96G75 393 aaPredicted RBP6.39□□□□□ -1.39
SCN1A-212ENST00000636194 VPS16Q9H269 839 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 BCL2L12Q9HB09 334 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 SCUBE2Q9NQ36 999 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 AKAP7Q9P0M2 348 aaPredicted RBP6.39□□□□□ -1.39
SCN1A-212ENST00000636194 RNF113AO15541 343 aaKnown RBP6.39□□□□□ -1.39
SCN1A-212ENST00000636194 SERPINB1P30740 379 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 RAB2AP61019 212 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 TRIM48Q8IWZ4 208 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 ZSCAN18Q8TBC5 510 aaPredicted RBP6.39□□□□□ -1.39
SCN1A-212ENST00000636194 LARP4BQ92615 738 aaKnown RBP6.39□□□□□ -1.39
SCN1A-212ENST00000636194 S100A13Q99584 98 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 C7orf25Q9BPX7 421 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 CYP26B1Q9NR63 512 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 PTPN22Q9Y2R2 807 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 TSC22D4Q9Y3Q8 395 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 ENC1O14682 589 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 ESRRAP11474 423 aaPredicted RBP6.39□□□□□ -1.39
SCN1A-212ENST00000636194 VSNL1P62760 191 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 TYW1BQ6NUM6 668 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 CENPUQ71F23 418 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 PDCD6IPQ8WUM4 868 aaKnown RBP6.39□□□□□ -1.39
SCN1A-212ENST00000636194 PLIN2Q99541 437 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 ADI1Q9BV57 179 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 ANGEL1Q9UNK9 670 aaKnown RBP6.39□□□□□ -1.39
SCN1A-212ENST00000636194 PCDHGA3Q9Y5H0 932 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 EXOC1LA0A1B0GW35 172 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 CYBBP04839 570 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 HPGDP15428 266 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 HSPA9P38646 679 aaKnown RBP6.39□□□□□ -1.39
SCN1A-212ENST00000636194 TXKP42681 527 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 YWHAZP63104 245 aaKnown RBP6.39□□□□□ -1.39
SCN1A-212ENST00000636194 DHX9Q08211 1270 aaKnown RBP6.39□□□□□ -1.39
SCN1A-212ENST00000636194 TERF2Q15554 542 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 ZRANB3Q5FWF4 1079 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 PADI6Q6TGC4 694 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 PSMA8Q8TAA3 256 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 U2AF1L4Q8WU68 220 aaKnown RBP6.39□□□□□ -1.39
SCN1A-212ENST00000636194 VIPAS39Q9H9C1 493 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 MYH7BA7E2Y1 1941 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 KRT38O76015 456 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 TJP3O95049 919 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 TCP1P17987 556 aaKnown RBP6.39□□□□□ -1.39
SCN1A-212ENST00000636194 RPS6KA3P51812 740 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 ATP12AP54707 1039 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 COG2Q14746 738 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 SUPT20HL1Q3ZLR7 823 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 ACCSLQ4AC99 568 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 CCDC60Q8IWA6 550 aaPredicted RBP6.39□□□□□ -1.39
SCN1A-212ENST00000636194 PPM1KQ8N3J5 372 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 COG1Q8WTW3 980 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 BRD8Q9H0E9 1235 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 KLHL25Q9H0H3 589 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 TRIM10Q9UDY6 481 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 SEPT9Q9UHD8 586 aaPredicted RBP6.39□□□□□ -1.39
SCN1A-212ENST00000636194 ANAPC7Q9UJX3 599 aa6.39□□□□□ -1.39
SCN1A-212ENST00000636194 DENND3A2RUS2 1198 aa6.38□□□□□ -1.39
SCN1A-212ENST00000636194 VCLP18206 1134 aa6.38□□□□□ -1.39
SCN1A-212ENST00000636194 INPP5AQ14642 412 aa6.38□□□□□ -1.39
SCN1A-212ENST00000636194 TMED2Q15363 201 aa6.38□□□□□ -1.39
SCN1A-212ENST00000636194 DNAJC24Q6P3W2 148 aa6.38□□□□□ -1.39
SCN1A-212ENST00000636194 LEMD2Q8NC56 503 aa6.38□□□□□ -1.39
SCN1A-212ENST00000636194 KLHL3Q9UH77 587 aa6.38□□□□□ -1.39
SCN1A-212ENST00000636194 COQ6Q9Y2Z9 468 aa6.38□□□□□ -1.39
SCN1A-212ENST00000636194 PCDHA1Q9Y5I3 950 aa6.38□□□□□ -1.39
SCN1A-212ENST00000636194 C9orf84Q5VXU9 1444 aa6.38□□□□□ -1.39
SCN1A-212ENST00000636194 GADD45BO75293 160 aaPredicted RBP6.38□□□□□ -1.39
SCN1A-212ENST00000636194 ZBED1O96006 694 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms