RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 ANKLE1Q8NAG6 615 aa17.04■□□□□ 0.32
CLN8-209ENST00000635970 GJA10Q969M2 543 aa17.04■□□□□ 0.32
CLN8-209ENST00000635970 CDHR1Q96JP9 859 aa17.04■□□□□ 0.32
CLN8-209ENST00000635970 AGO4Q9HCK5 861 aaKnown RBP17.04■□□□□ 0.32
CLN8-209ENST00000635970 GTPBP6O43824 516 aaPredicted RBP17.03■□□□□ 0.32
CLN8-209ENST00000635970 CCNT1O60563 726 aaKnown RBP17.03■□□□□ 0.32
CLN8-209ENST00000635970 COPB1P53618 953 aaKnown RBP17.03■□□□□ 0.32
CLN8-209ENST00000635970 STX17P56962 302 aa17.03■□□□□ 0.32
CLN8-209ENST00000635970 NKX3-2P78367 333 aa17.03■□□□□ 0.32
CLN8-209ENST00000635970 PAK1Q13153 545 aa17.03■□□□□ 0.32
CLN8-209ENST00000635970 NIPA1Q7RTP0 329 aa17.03■□□□□ 0.32
CLN8-209ENST00000635970 UBE2Q1Q7Z7E8 422 aa17.03■□□□□ 0.32
CLN8-209ENST00000635970 EPSTI1Q96J88 318 aa17.03■□□□□ 0.32
CLN8-209ENST00000635970 MLXIPQ9HAP2 919 aa17.03■□□□□ 0.32
CLN8-209ENST00000635970 A0A087X0B3 334 aa17.02■□□□□ 0.32
CLN8-209ENST00000635970 A0A1W2PQC6 194 aa17.02■□□□□ 0.32
CLN8-209ENST00000635970 ASGR1P07306 291 aa17.02■□□□□ 0.32
CLN8-209ENST00000635970 MMP3P08254 477 aa17.02■□□□□ 0.32
CLN8-209ENST00000635970 ATP2B1P20020 1258 aa17.02■□□□□ 0.32
CLN8-209ENST00000635970 TNNT3P45378 269 aaPredicted RBP17.02■□□□□ 0.32
CLN8-209ENST00000635970 GYS2P54840 703 aa17.02■□□□□ 0.32
CLN8-209ENST00000635970 ATP2C1P98194 919 aaPredicted RBP17.02■□□□□ 0.32
CLN8-209ENST00000635970 SETQ01105 290 aaPredicted RBP17.02■□□□□ 0.32
CLN8-209ENST00000635970 CKAP4Q07065 602 aaKnown RBP17.02■□□□□ 0.32
CLN8-209ENST00000635970 NEDD9Q14511 834 aa17.02■□□□□ 0.32
CLN8-209ENST00000635970 TCP11X2Q5H9J9 407 aa17.02■□□□□ 0.32
CLN8-209ENST00000635970 ZNF658Q5TYW1 1059 aaPredicted RBP17.02■□□□□ 0.32
CLN8-209ENST00000635970 EMID1Q96A84 441 aaPredicted RBP17.02■□□□□ 0.32
CLN8-209ENST00000635970 SPATA33Q96N06 139 aa17.02■□□□□ 0.32
CLN8-209ENST00000635970 SENP7Q9BQF6 1050 aa17.02■□□□□ 0.32
CLN8-209ENST00000635970 FAN1Q9Y2M0 1017 aa17.02■□□□□ 0.32
CLN8-209ENST00000635970 EPN1Q9Y6I3 576 aaPredicted RBP17.02■□□□□ 0.32
CLN8-209ENST00000635970 WDR81Q562E7 1941 aa17.02■□□□□ 0.31
CLN8-209ENST00000635970 A0A1W2PQ45 241 aaPredicted RBP17.02■□□□□ 0.31
CLN8-209ENST00000635970 A0A1W2PQY0 241 aa17.02■□□□□ 0.31
CLN8-209ENST00000635970 DDX39AO00148 427 aaKnown RBP17.02■□□□□ 0.31
CLN8-209ENST00000635970 MSH4O15457 936 aa17.02■□□□□ 0.31
CLN8-209ENST00000635970 MAFGO15525 162 aa17.02■□□□□ 0.31
CLN8-209ENST00000635970 RHOXF2BP0C7M4 288 aa17.02■□□□□ 0.31
CLN8-209ENST00000635970 CPT1AP50416 773 aa17.02■□□□□ 0.31
CLN8-209ENST00000635970 ACLYP53396 1101 aa17.02■□□□□ 0.31
CLN8-209ENST00000635970 LAMC2Q13753 1193 aa17.02■□□□□ 0.31
CLN8-209ENST00000635970 TSR1Q2NL82 804 aaKnown RBP17.02■□□□□ 0.31
CLN8-209ENST00000635970 METTL7BQ6UX53 244 aa17.02■□□□□ 0.31
CLN8-209ENST00000635970 CXCL17Q6UXB2 119 aa17.02■□□□□ 0.31
CLN8-209ENST00000635970 TRAPPC11Q7Z392 1133 aa17.02■□□□□ 0.31
CLN8-209ENST00000635970 ACRBPQ8NEB7 543 aa17.02■□□□□ 0.31
CLN8-209ENST00000635970 RHOXF2Q9BQY4 288 aa17.02■□□□□ 0.31
CLN8-209ENST00000635970 ZNF577Q9BSK1 485 aa17.02■□□□□ 0.31
CLN8-209ENST00000635970 SENP6Q9GZR1 1112 aaPredicted RBP17.02■□□□□ 0.31
CLN8-209ENST00000635970 DDX25Q9UHL0 483 aaKnown RBP17.02■□□□□ 0.31
CLN8-209ENST00000635970 CYP3A7-CYP3A51PA0A087WV96 503 aa17.01■□□□□ 0.31
CLN8-209ENST00000635970 A6NJR5 290 aa17.01■□□□□ 0.31
CLN8-209ENST00000635970 IPO5O00410 1097 aaKnown RBP17.01■□□□□ 0.31
CLN8-209ENST00000635970 COL6A1P12109 1028 aa17.01■□□□□ 0.31
CLN8-209ENST00000635970 CYP3A7P24462 503 aa17.01■□□□□ 0.31
CLN8-209ENST00000635970 KRT9P35527 623 aa17.01■□□□□ 0.31
CLN8-209ENST00000635970 KRT83P78385 493 aa17.01■□□□□ 0.31
CLN8-209ENST00000635970 Q4G0T1 1027 aa17.01■□□□□ 0.31
CLN8-209ENST00000635970 POTEDQ86YR6 584 aa17.01■□□□□ 0.31
CLN8-209ENST00000635970 OR8K1Q8NGG5 319 aa17.01■□□□□ 0.31
CLN8-209ENST00000635970 PPTC7Q8NI37 304 aa17.01■□□□□ 0.31
CLN8-209ENST00000635970 RUBCNQ92622 972 aa17.01■□□□□ 0.31
CLN8-209ENST00000635970 MBOAT7Q96N66 472 aa17.01■□□□□ 0.31
CLN8-209ENST00000635970 C11orf49Q9H6J7 331 aa17.01■□□□□ 0.31
CLN8-209ENST00000635970 PHF24Q9UPV7 400 aa17.01■□□□□ 0.31
CLN8-209ENST00000635970 CTNND2Q9UQB3 1225 aa17.01■□□□□ 0.31
CLN8-209ENST00000635970 NDUFA10O95299 355 aa17■□□□□ 0.31
CLN8-209ENST00000635970 MYL3P08590 195 aa17■□□□□ 0.31
CLN8-209ENST00000635970 MAGEA9P43362 315 aa17■□□□□ 0.31
CLN8-209ENST00000635970 E2F4Q16254 413 aa17■□□□□ 0.31
CLN8-209ENST00000635970 RRAGBQ5VZM2 374 aa17■□□□□ 0.31
CLN8-209ENST00000635970 PAPD7Q5XG87 772 aaKnown RBP17■□□□□ 0.31
CLN8-209ENST00000635970 IQCEQ6IPM2 695 aa17■□□□□ 0.31
CLN8-209ENST00000635970 MOXD1Q6UVY6 613 aa17■□□□□ 0.31
CLN8-209ENST00000635970 NECAB2Q7Z6G3 386 aa17■□□□□ 0.31
CLN8-209ENST00000635970 PCSK9Q8NBP7 692 aaKnown RBP17■□□□□ 0.31
CLN8-209ENST00000635970 FAM107BQ9H098 131 aa17■□□□□ 0.31
CLN8-209ENST00000635970 SCN10AQ9Y5Y9 1956 aa17■□□□□ 0.31
CLN8-209ENST00000635970 KCNJ18B7U540 433 aa17■□□□□ 0.31
CLN8-209ENST00000635970 MYL1P05976 194 aa17■□□□□ 0.31
CLN8-209ENST00000635970 ZNF286BP0CG31 522 aa17■□□□□ 0.31
CLN8-209ENST00000635970 ATN1P54259 1190 aaPredicted RBP17■□□□□ 0.31
CLN8-209ENST00000635970 PURAQ00577 322 aaKnown RBP17■□□□□ 0.31
CLN8-209ENST00000635970 KCNJ12Q14500 433 aa17■□□□□ 0.31
CLN8-209ENST00000635970 TTC38Q5R3I4 469 aa17■□□□□ 0.31
CLN8-209ENST00000635970 ARL6IP4Q66PJ3 421 aaKnown RBP17■□□□□ 0.31
CLN8-209ENST00000635970 PPP4R3AQ6IN85 833 aa17■□□□□ 0.31
CLN8-209ENST00000635970 PPP1R13LQ8WUF5 828 aa17■□□□□ 0.31
CLN8-209ENST00000635970 TSEN34Q9BSV6 310 aaKnown RBP17■□□□□ 0.31
CLN8-209ENST00000635970 JPH1Q9HDC5 661 aaPredicted RBP17■□□□□ 0.31
CLN8-209ENST00000635970 SAR1BQ9Y6B6 198 aa17■□□□□ 0.31
CLN8-209ENST00000635970 MOXD2PA6NHM9 499 aa16.99■□□□□ 0.31
CLN8-209ENST00000635970 NOP56O00567 594 aaKnown RBP16.99■□□□□ 0.31
CLN8-209ENST00000635970 DHX15O43143 795 aaKnown RBP16.99■□□□□ 0.31
CLN8-209ENST00000635970 EEF1GP26641 437 aaKnown RBP16.99■□□□□ 0.31
CLN8-209ENST00000635970 CCT6AP40227 531 aaKnown RBP16.99■□□□□ 0.31
CLN8-209ENST00000635970 C10orf67Q8IYJ2 551 aa16.99■□□□□ 0.31
CLN8-209ENST00000635970 GIMAP8Q8ND71 665 aaPredicted RBP16.99■□□□□ 0.31
CLN8-209ENST00000635970 ETNPPLQ8TBG4 499 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms