RNA–Protein interactions for RNA: ENST00000635682.1

HSPG2-214, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 921 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-214ENST00000635682 TPH2Q8IWU9 490 aa16.54■□□□□ 0.24
HSPG2-214ENST00000635682 LINC01599Q8WXQ3 324 aa16.54■□□□□ 0.24
HSPG2-214ENST00000635682 LRFN3Q9BTN0 628 aa16.54■□□□□ 0.24
HSPG2-214ENST00000635682 ZSWIM4Q9H7M6 989 aa16.54■□□□□ 0.24
HSPG2-214ENST00000635682 AKT3Q9Y243 479 aa16.54■□□□□ 0.24
HSPG2-214ENST00000635682 RALGAPA2Q2PPJ7 1873 aa16.54■□□□□ 0.24
HSPG2-214ENST00000635682 BMP15O95972 392 aa16.53■□□□□ 0.24
HSPG2-214ENST00000635682 LINC00271P0C7V0 271 aa16.53■□□□□ 0.24
HSPG2-214ENST00000635682 TECP42680 631 aa16.53■□□□□ 0.24
HSPG2-214ENST00000635682 CYP4A11Q02928 519 aa16.53■□□□□ 0.24
HSPG2-214ENST00000635682 BTG3Q14201 252 aaPredicted RBP16.53■□□□□ 0.24
HSPG2-214ENST00000635682 BECN1Q14457 450 aa16.53■□□□□ 0.24
HSPG2-214ENST00000635682 UGCGQ16739 394 aa16.53■□□□□ 0.24
HSPG2-214ENST00000635682 FAM178BQ8IXR5 827 aa16.53■□□□□ 0.24
HSPG2-214ENST00000635682 DYDC2Q96IM9 177 aa16.53■□□□□ 0.24
HSPG2-214ENST00000635682 LXNQ9BS40 222 aa16.53■□□□□ 0.24
HSPG2-214ENST00000635682 NSUN3Q9H649 340 aaKnown RBP16.53■□□□□ 0.24
HSPG2-214ENST00000635682 RC3H2Q9HBD1 1191 aaKnown RBP16.53■□□□□ 0.24
HSPG2-214ENST00000635682 GINS2Q9Y248 185 aa16.53■□□□□ 0.24
HSPG2-214ENST00000635682 TRPV2Q9Y5S1 764 aa16.53■□□□□ 0.24
HSPG2-214ENST00000635682 EVPLQ92817 2033 aa16.53■□□□□ 0.24
HSPG2-214ENST00000635682 ADGRA3Q8IWK6 1321 aa16.52■□□□□ 0.24
HSPG2-214ENST00000635682 MYH9P35579 1960 aaKnown RBP16.52■□□□□ 0.24
HSPG2-214ENST00000635682 FAM86C2PA6NEL3 165 aa16.52■□□□□ 0.24
HSPG2-214ENST00000635682 GRXCR2A6NFK2 248 aa16.52■□□□□ 0.24
HSPG2-214ENST00000635682 EML1O00423 815 aa16.52■□□□□ 0.24
HSPG2-214ENST00000635682 IBSPP21815 317 aaPredicted RBP16.52■□□□□ 0.24
HSPG2-214ENST00000635682 SSTR3P32745 418 aaPredicted RBP16.52■□□□□ 0.24
HSPG2-214ENST00000635682 EFCAB12Q6NXP0 572 aa16.52■□□□□ 0.24
HSPG2-214ENST00000635682 GJD3Q8N144 294 aa16.52■□□□□ 0.24
HSPG2-214ENST00000635682 ZNF710Q8N1W2 664 aa16.52■□□□□ 0.24
HSPG2-214ENST00000635682 SLC7A3Q8WY07 619 aa16.52■□□□□ 0.24
HSPG2-214ENST00000635682 ZNF689Q96CS4 500 aaPredicted RBP16.52■□□□□ 0.24
HSPG2-214ENST00000635682 CEP170P1Q96L14 293 aa16.52■□□□□ 0.24
HSPG2-214ENST00000635682 MTMR9Q96QG7 549 aa16.52■□□□□ 0.24
HSPG2-214ENST00000635682 EIF2AK1Q9BQI3 630 aaKnown RBP16.52■□□□□ 0.24
HSPG2-214ENST00000635682 CLDND1Q9NY35 253 aa16.52■□□□□ 0.24
HSPG2-214ENST00000635682 PADI3Q9ULW8 664 aa16.52■□□□□ 0.24
HSPG2-214ENST00000635682 PPME1Q9Y570 386 aa16.52■□□□□ 0.24
HSPG2-214ENST00000635682 ATG2AQ2TAZ0 1938 aa16.52■□□□□ 0.23
HSPG2-214ENST00000635682 COL4A6Q14031 1691 aa16.52■□□□□ 0.23
HSPG2-214ENST00000635682 C5orf67F2Z3F1 127 aa16.51■□□□□ 0.23
HSPG2-214ENST00000635682 ZNF862O60290 1169 aa16.51■□□□□ 0.23
HSPG2-214ENST00000635682 DGKIO75912 1065 aa16.51■□□□□ 0.23
HSPG2-214ENST00000635682 RB1P06400 928 aa16.51■□□□□ 0.23
HSPG2-214ENST00000635682 ATP4AP20648 1035 aa16.51■□□□□ 0.23
HSPG2-214ENST00000635682 POLGP54098 1239 aaPredicted RBP16.51■□□□□ 0.23
HSPG2-214ENST00000635682 PTGDRQ13258 359 aa16.51■□□□□ 0.23
HSPG2-214ENST00000635682 CTTNQ14247 550 aaKnown RBP16.51■□□□□ 0.23
HSPG2-214ENST00000635682 NBR1Q14596 966 aa16.51■□□□□ 0.23
HSPG2-214ENST00000635682 TMEM31Q5JXX7 168 aa16.51■□□□□ 0.23
HSPG2-214ENST00000635682 B3GNT9Q6UX72 402 aa16.51■□□□□ 0.23
HSPG2-214ENST00000635682 DTHD1Q6ZMT9 781 aa16.51■□□□□ 0.23
HSPG2-214ENST00000635682 FERMT3Q86UX7 667 aa16.51■□□□□ 0.23
HSPG2-214ENST00000635682 C4orf19Q8IY42 314 aa16.51■□□□□ 0.23
HSPG2-214ENST00000635682 PABPC5Q96DU9 382 aaKnown RBP16.51■□□□□ 0.23
HSPG2-214ENST00000635682 C11orf84Q9BUA3 381 aaPredicted RBP16.51■□□□□ 0.23
HSPG2-214ENST00000635682 CELF4Q9BZC1 486 aaKnown RBP16.51■□□□□ 0.23
HSPG2-214ENST00000635682 TMEM60Q9H2L4 133 aa16.51■□□□□ 0.23
HSPG2-214ENST00000635682 ALG13Q9NP73 1137 aaKnown RBP16.51■□□□□ 0.23
HSPG2-214ENST00000635682 PCDHB6Q9Y5E3 794 aa16.51■□□□□ 0.23
HSPG2-214ENST00000635682 POTEMA6NI47 508 aa16.5■□□□□ 0.23
HSPG2-214ENST00000635682 WNT7AO00755 349 aa16.5■□□□□ 0.23
HSPG2-214ENST00000635682 STX6O43752 255 aa16.5■□□□□ 0.23
HSPG2-214ENST00000635682 C22orf31O95567 290 aa16.5■□□□□ 0.23
HSPG2-214ENST00000635682 SYT1P21579 422 aa16.5■□□□□ 0.23
HSPG2-214ENST00000635682 YWHABP31946 246 aaKnown RBP16.5■□□□□ 0.23
HSPG2-214ENST00000635682 GTF2F1P35269 517 aaKnown RBP eCLIP16.5■□□□□ 0.23
HSPG2-214ENST00000635682 CDC42EP1Q00587 391 aa16.5■□□□□ 0.23
HSPG2-214ENST00000635682 PAK2Q13177 524 aa16.5■□□□□ 0.23
HSPG2-214ENST00000635682 PAN2Q504Q3 1202 aaKnown RBP16.5■□□□□ 0.23
HSPG2-214ENST00000635682 XKR9Q5GH70 373 aa16.5■□□□□ 0.23
HSPG2-214ENST00000635682 CLP1Q92989 425 aaKnown RBP16.5■□□□□ 0.23
HSPG2-214ENST00000635682 NIFKQ9BYG3 293 aaKnown RBP16.5■□□□□ 0.23
HSPG2-214ENST00000635682 IGFLR1Q9H665 355 aa16.5■□□□□ 0.23
HSPG2-214ENST00000635682 CDHR5Q9HBB8 845 aa16.5■□□□□ 0.23
HSPG2-214ENST00000635682 TUFT1Q9NNX1 390 aa16.5■□□□□ 0.23
HSPG2-214ENST00000635682 C11orf16Q9NQ32 467 aa16.5■□□□□ 0.23
HSPG2-214ENST00000635682 RGL1Q9NZL6 768 aa16.5■□□□□ 0.23
HSPG2-214ENST00000635682 LRWD1Q9UFC0 647 aa16.5■□□□□ 0.23
HSPG2-214ENST00000635682 RWDD3Q9Y3V2 267 aa16.5■□□□□ 0.23
HSPG2-214ENST00000635682 MRPL42Q9Y6G3 142 aaKnown RBP16.5■□□□□ 0.23
HSPG2-214ENST00000635682 PI4K2BG5E9Z4 385 aa16.49■□□□□ 0.23
HSPG2-214ENST00000635682 LTBRP36941 435 aa16.49■□□□□ 0.23
HSPG2-214ENST00000635682 CCT6AP40227 531 aaKnown RBP16.49■□□□□ 0.23
HSPG2-214ENST00000635682 RFC5P40937 340 aa16.49■□□□□ 0.23
HSPG2-214ENST00000635682 PRPHP41219 470 aa16.49■□□□□ 0.23
HSPG2-214ENST00000635682 GATMP50440 423 aa16.49■□□□□ 0.23
HSPG2-214ENST00000635682 CLCN3P51790 818 aa16.49■□□□□ 0.23
HSPG2-214ENST00000635682 NFX1Q12986 1120 aaKnown RBP16.49■□□□□ 0.23
HSPG2-214ENST00000635682 CLUL1Q15846 466 aa16.49■□□□□ 0.23
HSPG2-214ENST00000635682 KRT79Q5XKE5 535 aa16.49■□□□□ 0.23
HSPG2-214ENST00000635682 PLA2G4FQ68DD2 849 aa16.49■□□□□ 0.23
HSPG2-214ENST00000635682 CRIPAKQ8N1N5 446 aa16.49■□□□□ 0.23
HSPG2-214ENST00000635682 SPRYD3Q8NCJ5 442 aa16.49■□□□□ 0.23
HSPG2-214ENST00000635682 NLRP7Q8WX94 980 aa16.49■□□□□ 0.23
HSPG2-214ENST00000635682 CDK5RAP3Q96JB5 506 aa16.49■□□□□ 0.23
HSPG2-214ENST00000635682 PPP1R16BQ96T49 567 aa16.49■□□□□ 0.23
HSPG2-214ENST00000635682 FTHL17Q9BXU8 183 aa16.49■□□□□ 0.23
HSPG2-214ENST00000635682 TMX1Q9H3N1 280 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms