RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 FNDC7Q5VTL7 733 aa4.29□□□□□ -1.72
NPHP3-ACAD11-202ENST00000632629 FGD2Q7Z6J4 655 aa4.29□□□□□ -1.72
NPHP3-ACAD11-202ENST00000632629 TAX1BP1Q86VP1 789 aa4.29□□□□□ -1.72
NPHP3-ACAD11-202ENST00000632629 CACTINQ8WUQ7 758 aaKnown RBP4.29□□□□□ -1.72
NPHP3-ACAD11-202ENST00000632629 RABGGTAQ92696 567 aa4.29□□□□□ -1.72
NPHP3-ACAD11-202ENST00000632629 FOXRED1Q96CU9 486 aaPredicted RBP4.29□□□□□ -1.72
NPHP3-ACAD11-202ENST00000632629 MAML3Q96JK9 1138 aa4.29□□□□□ -1.72
NPHP3-ACAD11-202ENST00000632629 DNAJC2Q99543 621 aaKnown RBP4.29□□□□□ -1.72
NPHP3-ACAD11-202ENST00000632629 PCIF1Q9H4Z3 704 aa4.29□□□□□ -1.72
NPHP3-ACAD11-202ENST00000632629 UCKL1Q9NWZ5 548 aa4.29□□□□□ -1.72
NPHP3-ACAD11-202ENST00000632629 KCMF1Q9P0J7 381 aa4.29□□□□□ -1.72
NPHP3-ACAD11-202ENST00000632629 SAMD15Q9P1V8 674 aa4.29□□□□□ -1.72
NPHP3-ACAD11-202ENST00000632629 B4GALT6Q9UBX8 382 aa4.29□□□□□ -1.72
NPHP3-ACAD11-202ENST00000632629 UBA6A0AVT1 1052 aaPredicted RBP4.28□□□□□ -1.72
NPHP3-ACAD11-202ENST00000632629 RASSF10A6NK89 507 aa4.28□□□□□ -1.72
NPHP3-ACAD11-202ENST00000632629 SLC26A4O43511 780 aa4.28□□□□□ -1.72
NPHP3-ACAD11-202ENST00000632629 POU3F2P20265 443 aaPredicted RBP4.28□□□□□ -1.72
NPHP3-ACAD11-202ENST00000632629 MRE11P49959 708 aa4.28□□□□□ -1.72
NPHP3-ACAD11-202ENST00000632629 KIF11P52732 1056 aa4.28□□□□□ -1.72
NPHP3-ACAD11-202ENST00000632629 CD83Q01151 205 aa4.28□□□□□ -1.72
NPHP3-ACAD11-202ENST00000632629 HGFACQ04756 655 aa4.28□□□□□ -1.72
NPHP3-ACAD11-202ENST00000632629 BMS1Q14692 1282 aaKnown RBP4.28□□□□□ -1.72
NPHP3-ACAD11-202ENST00000632629 TMEM132BQ14DG7 1078 aa4.28□□□□□ -1.72
NPHP3-ACAD11-202ENST00000632629 DGKDQ16760 1214 aa4.28□□□□□ -1.72
NPHP3-ACAD11-202ENST00000632629 GAGE13Q4V321 117 aa4.28□□□□□ -1.72
NPHP3-ACAD11-202ENST00000632629 TTC38Q5R3I4 469 aa4.28□□□□□ -1.72
NPHP3-ACAD11-202ENST00000632629 ABHD17CQ6PCB6 329 aa4.28□□□□□ -1.72
NPHP3-ACAD11-202ENST00000632629 MAMDC4Q6UXC1 1216 aa4.28□□□□□ -1.72
NPHP3-ACAD11-202ENST00000632629 Q6ZSN1 163 aa4.28□□□□□ -1.72
NPHP3-ACAD11-202ENST00000632629 ZNF627Q7L945 461 aa4.28□□□□□ -1.72
NPHP3-ACAD11-202ENST00000632629 BMP8AQ7Z5Y6 402 aa4.28□□□□□ -1.72
NPHP3-ACAD11-202ENST00000632629 GLCCI1Q86VQ1 547 aa4.28□□□□□ -1.72
NPHP3-ACAD11-202ENST00000632629 HOMER1Q86YM7 354 aa4.28□□□□□ -1.72
NPHP3-ACAD11-202ENST00000632629 FUKQ8N0W3 1084 aa4.28□□□□□ -1.72
NPHP3-ACAD11-202ENST00000632629 IL17DQ8TAD2 202 aa4.28□□□□□ -1.72
NPHP3-ACAD11-202ENST00000632629 SH3TC2Q8TF17 1288 aa4.28□□□□□ -1.72
NPHP3-ACAD11-202ENST00000632629 CFHR4Q92496 578 aa4.28□□□□□ -1.72
NPHP3-ACAD11-202ENST00000632629 RPGRQ92834 1020 aaKnown RBP4.28□□□□□ -1.72
NPHP3-ACAD11-202ENST00000632629 SLC7A6OSQ96CW6 309 aaPredicted RBP4.28□□□□□ -1.72
NPHP3-ACAD11-202ENST00000632629 HAPLN2Q9GZV7 340 aa4.28□□□□□ -1.72
NPHP3-ACAD11-202ENST00000632629 USP36Q9P275 1121 aaKnown RBP4.28□□□□□ -1.72
NPHP3-ACAD11-202ENST00000632629 SAE1Q9UBE0 346 aaPredicted RBP4.28□□□□□ -1.72
NPHP3-ACAD11-202ENST00000632629 CTDP1Q9Y5B0 961 aaPredicted RBP4.28□□□□□ -1.72
NPHP3-ACAD11-202ENST00000632629 M0R2C6 588 aa4.27□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 CBX4O00257 560 aa4.27□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 DNAJC8O75937 253 aaPredicted RBP4.27□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 GLRX3O76003 335 aaKnown RBP4.27□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 ACO1P21399 889 aaKnown RBP4.27□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 RRADP55042 308 aa4.27□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 KRTAP10-11P60412 298 aa4.27□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 HHEXQ03014 270 aa4.27□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 SQSTM1Q13501 440 aa4.27□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 TUBA3CQ13748 450 aa4.27□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 TUBA3EQ6PEY2 450 aa4.27□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 LARP4Q71RC2 724 aaKnown RBP eCLIP4.27□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 BHLHA9Q7RTU4 235 aa4.27□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 PASD1Q8IV76 773 aa4.27□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 C16orf92Q96LL3 132 aa4.27□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 PLA2G12BQ9BX93 195 aa4.27□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 SLC6A15Q9H2J7 730 aa4.27□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 ZSWIM4Q9H7M6 989 aa4.27□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 PLAAQ9Y263 795 aa4.27□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 SPO11Q9Y5K1 396 aa4.27□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 MATN2O00339 956 aa4.26□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 KCNK3O14649 394 aa4.26□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 MTSS1O43312 755 aa4.26□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 RAMP2O60895 175 aa4.26□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 PEX11BO96011 259 aa4.26□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 MAKP20794 623 aa4.26□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 FBLP22087 321 aaKnown RBP4.26□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 ACRV1P26436 265 aa4.26□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 ADCY8P40145 1251 aa4.26□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 OCRLQ01968 901 aa4.26□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 MAN2A1Q16706 1144 aa4.26□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 TM4SF20Q53R12 229 aa4.26□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 SLFN12LQ6IEE8 588 aa4.26□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 LRSAM1Q6UWE0 723 aa4.26□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 C16orf86Q6ZW13 317 aa4.26□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 FILIP1Q7Z7B0 1213 aa4.26□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 PHYKPLQ8IUZ5 450 aa4.26□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 ANKRD35Q8N283 1001 aa4.26□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 OR5AN1Q8NGI8 311 aa4.26□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 PITHD1Q9GZP4 211 aaPredicted RBP4.26□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 KIAA1683Q9H0B3 1180 aa4.26□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 C12orf65Q9H3J6 166 aaKnown RBP4.26□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 SYNPO2Q9UMS6 1093 aa4.26□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 ZKSCAN5Q9Y2L8 839 aa4.26□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 PTPN22Q9Y2R2 807 aa4.26□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 PTPDC1A2A3K4 754 aa4.25□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 TRAF5O00463 557 aa4.25□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 RAPGEF3O95398 923 aa4.25□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 BMP5P22003 454 aa4.25□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 PABPC4Q13310 644 aaKnown RBP eCLIP4.25□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 LRRC32Q14392 662 aa4.25□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 TAF7LQ5H9L4 462 aa4.25□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 GPR158Q5T848 1215 aa4.25□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 FSTL4Q6MZW2 842 aa4.25□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 TIGD7Q6NT04 549 aaPredicted RBP4.25□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 BCL6BQ8N143 479 aaPredicted RBP4.25□□□□□ -1.73
NPHP3-ACAD11-202ENST00000632629 AHI1Q8N157 1196 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms