RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.38□□□□□ -1.55
SDCBP-213ENST00000630925 IQGAP2Q13576 1575 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 LRRC14BA6NHZ5 514 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 C11orf95C9JLR9 678 aaPredicted RBP5.38□□□□□ -1.55
SDCBP-213ENST00000630925 ADAMTS3O15072 1205 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 TBCAO75347 108 aaKnown RBP5.38□□□□□ -1.55
SDCBP-213ENST00000630925 CYP1A2P05177 515 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 JUNDP17535 347 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 ALDH1B1P30837 517 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 SUMO1P63165 101 aaKnown RBP5.38□□□□□ -1.55
SDCBP-213ENST00000630925 RBM6P78332 1123 aaKnown RBP5.38□□□□□ -1.55
SDCBP-213ENST00000630925 IFI35P80217 286 aaPredicted RBP5.38□□□□□ -1.55
SDCBP-213ENST00000630925 ERV3-1Q14264 604 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 PKN1Q16512 942 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 RTN1Q16799 776 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 FILIP1LQ4L180 1135 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 KRBOX4Q5JUW0 171 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 FAM209BQ5JX69 171 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 MEX3CQ5U5Q3 659 aaKnown RBP5.38□□□□□ -1.55
SDCBP-213ENST00000630925 TTBK2Q6IQ55 1244 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 LILRA6Q6PI73 481 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 TXNDC11Q6PKC3 985 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 TPTE2Q6XPS3 522 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 ZNF783Q6ZMS7 281 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 TTLL7Q6ZT98 887 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 LPCAT2Q7L5N7 544 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 CCDC186Q7Z3E2 898 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 CCDC84Q86UT8 332 aaPredicted RBP5.38□□□□□ -1.55
SDCBP-213ENST00000630925 PPFIBP1Q86W92 1011 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 CPOQ8IVL8 374 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 SMC1BQ8NDV3 1235 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 CCDC148Q8NFR7 591 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 KLHL6Q8WZ60 621 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 RFFLQ8WZ73 363 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 DIO2Q92813 273 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 TMEM41AQ96HV5 264 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 TEKT5Q96M29 485 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 C7orf26Q96N11 449 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 TEX13AQ9BXU3 409 aaPredicted RBP5.38□□□□□ -1.55
SDCBP-213ENST00000630925 OXCT2Q9BYC2 517 aaPredicted RBP5.38□□□□□ -1.55
SDCBP-213ENST00000630925 AGXT2Q9BYV1 514 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 IQCGQ9H095 443 aaKnown RBP5.38□□□□□ -1.55
SDCBP-213ENST00000630925 OR10A4Q9H209 315 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 CHRDQ9H2X0 955 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 ETNK1Q9HBU6 452 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 TCP11L1Q9NUJ3 509 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 HAUS2Q9NVX0 235 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 C14orf119Q9NWQ9 140 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 CHORDC1Q9UHD1 332 aaPredicted RBP5.38□□□□□ -1.55
SDCBP-213ENST00000630925 ITGB1BP2Q9UKP3 347 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 PCOLCE2Q9UKZ9 415 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 PAXBP1Q9Y5B6 917 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 PCDHGB2Q9Y5G2 931 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 TACC3Q9Y6A5 838 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 USP3Q9Y6I4 520 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 ABCA8O94911 1581 aa5.37□□□□□ -1.55
SDCBP-213ENST00000630925 VWDEQ8N2E2 1590 aa5.37□□□□□ -1.55
SDCBP-213ENST00000630925 CYP2D7A0A087X1C5 515 aa5.37□□□□□ -1.55
SDCBP-213ENST00000630925 STX6O43752 255 aa5.37□□□□□ -1.55
SDCBP-213ENST00000630925 FOXD2O60548 495 aaPredicted RBP5.37□□□□□ -1.55
SDCBP-213ENST00000630925 PHACTR2O75167 634 aa5.37□□□□□ -1.55
SDCBP-213ENST00000630925 FKBP9O95302 570 aa5.37□□□□□ -1.55
SDCBP-213ENST00000630925 CYP2A6P11509 494 aaPredicted RBP5.37□□□□□ -1.55
SDCBP-213ENST00000630925 SCG2P13521 617 aa5.37□□□□□ -1.55
SDCBP-213ENST00000630925 PORP16435 677 aaPredicted RBP5.37□□□□□ -1.55
SDCBP-213ENST00000630925 FERP16591 822 aa5.37□□□□□ -1.55
SDCBP-213ENST00000630925 TKTL1P51854 596 aa5.37□□□□□ -1.55
SDCBP-213ENST00000630925 DSG1Q02413 1049 aa5.37□□□□□ -1.55
SDCBP-213ENST00000630925 SLC14A1Q13336 389 aa5.37□□□□□ -1.55
SDCBP-213ENST00000630925 MTFR1Q15390 333 aa5.37□□□□□ -1.55
SDCBP-213ENST00000630925 ZYXQ15942 572 aaKnown RBP5.37□□□□□ -1.55
SDCBP-213ENST00000630925 MAJINQ3KP22 176 aa5.37□□□□□ -1.55
SDCBP-213ENST00000630925 RPS26P11Q5JNZ5 115 aaPredicted RBP5.37□□□□□ -1.55
SDCBP-213ENST00000630925 JMJD6Q6NYC1 403 aaPredicted RBP5.37□□□□□ -1.55
SDCBP-213ENST00000630925 PGBD2Q6P3X8 592 aa5.37□□□□□ -1.55
SDCBP-213ENST00000630925 DARS2Q6PI48 645 aaKnown RBP5.37□□□□□ -1.55
SDCBP-213ENST00000630925 PACS1Q6VY07 963 aa5.37□□□□□ -1.55
SDCBP-213ENST00000630925 PLEKHM3Q6ZWE6 761 aa5.37□□□□□ -1.55
SDCBP-213ENST00000630925 FKBP9P1Q75LS8 142 aa5.37□□□□□ -1.55
SDCBP-213ENST00000630925 SPATA2LQ8IUW3 424 aaPredicted RBP5.37□□□□□ -1.55
SDCBP-213ENST00000630925 SEPT12Q8IYM1 358 aa5.37□□□□□ -1.55
SDCBP-213ENST00000630925 ALDH16A1Q8IZ83 802 aa5.37□□□□□ -1.55
SDCBP-213ENST00000630925 USP38Q8NB14 1042 aa5.37□□□□□ -1.55
SDCBP-213ENST00000630925 ADAMTS15Q8TE58 950 aa5.37□□□□□ -1.55
SDCBP-213ENST00000630925 CREB3L4Q8TEY5 395 aa5.37□□□□□ -1.55
SDCBP-213ENST00000630925 CTNNBL1Q8WYA6 563 aaPredicted RBP5.37□□□□□ -1.55
SDCBP-213ENST00000630925 CCDC114Q96M63 670 aa5.37□□□□□ -1.55
SDCBP-213ENST00000630925 IPO9Q96P70 1041 aaKnown RBP5.37□□□□□ -1.55
SDCBP-213ENST00000630925 YME1L1Q96TA2 773 aa5.37□□□□□ -1.55
SDCBP-213ENST00000630925 GAS2L1Q99501 681 aaPredicted RBP5.37□□□□□ -1.55
SDCBP-213ENST00000630925 SORBS1Q9BX66 1292 aaKnown RBP5.37□□□□□ -1.55
SDCBP-213ENST00000630925 MAK16Q9BXY0 300 aaKnown RBP5.37□□□□□ -1.55
SDCBP-213ENST00000630925 EMC7Q9NPA0 242 aa5.37□□□□□ -1.55
SDCBP-213ENST00000630925 CCDC177Q9NQR7 707 aaPredicted RBP5.37□□□□□ -1.55
SDCBP-213ENST00000630925 KRT82Q9NSB4 513 aa5.37□□□□□ -1.55
SDCBP-213ENST00000630925 RXFP3Q9NSD7 469 aa5.37□□□□□ -1.55
SDCBP-213ENST00000630925 DZANK1Q9NVP4 752 aa5.37□□□□□ -1.55
SDCBP-213ENST00000630925 SEPT10Q9P0V9 454 aa5.37□□□□□ -1.55
SDCBP-213ENST00000630925 ZC3H7BQ9UGR2 993 aaKnown RBP5.37□□□□□ -1.55
SDCBP-213ENST00000630925 NDOR1Q9UHB4 597 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms