RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 MRGPRX2Q96LB1 330 aa5.52□□□□□ -1.53
LINC00550-201ENST00000629293 C17orf80Q9BSJ5 609 aa5.52□□□□□ -1.53
LINC00550-201ENST00000629293 ZSWIM4Q9H7M6 989 aa5.52□□□□□ -1.53
LINC00550-201ENST00000629293 SUGCTQ9HAC7 445 aa5.52□□□□□ -1.53
LINC00550-201ENST00000629293 CD320Q9NPF0 282 aa5.52□□□□□ -1.53
LINC00550-201ENST00000629293 COG5Q9UP83 839 aa5.52□□□□□ -1.53
LINC00550-201ENST00000629293 USP20Q9Y2K6 914 aa5.52□□□□□ -1.53
LINC00550-201ENST00000629293 ORC4O43929 436 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 MMP3P08254 477 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 IKBKEQ14164 716 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 DGKDQ16760 1214 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 RUFY3Q7L099 469 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 SYTL5Q8TDW5 730 aaPredicted RBP5.51□□□□□ -1.53
LINC00550-201ENST00000629293 YME1L1Q96TA2 773 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 TM6SF1Q9BZW5 370 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 COL20A1Q9P218 1284 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 ADAMTS1Q9UHI8 967 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 MRPL42Q9Y6G3 142 aaKnown RBP5.51□□□□□ -1.53
LINC00550-201ENST00000629293 GVINP1Q7Z2Y8 2422 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 ZNF213O14771 459 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 NKRFO15226 690 aaKnown RBP eCLIP5.51□□□□□ -1.53
LINC00550-201ENST00000629293 KLF4O43474 513 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 PLA2G6O60733 806 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 NBNO60934 754 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 MBD3O95983 291 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 CKBP12277 381 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 AK2P54819 239 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 PTPN5P54829 565 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 PTH1RQ03431 593 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 CCDC173Q0VFZ6 552 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 NECTIN1Q15223 517 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 QRICH1Q2TAL8 776 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 ZNF618Q5T7W0 954 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.51□□□□□ -1.53
LINC00550-201ENST00000629293 FBXO11Q86XK2 927 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 ADGRF4Q8IZF3 695 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 DBF4BQ8NFT6 615 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 DNERQ8NFT8 737 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 RUFY2Q8WXA3 655 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 SPATA33Q96N06 139 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 TGS1Q96RS0 853 aaKnown RBP5.51□□□□□ -1.53
LINC00550-201ENST00000629293 TRIM56Q9BRZ2 755 aaKnown RBP5.51□□□□□ -1.53
LINC00550-201ENST00000629293 SEZ6LQ9BYH1 1024 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 UBE2ZQ9H832 354 aaPredicted RBP5.51□□□□□ -1.53
LINC00550-201ENST00000629293 MLXIPQ9HAP2 919 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 NEDD4P46934 1319 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 ENPP3O14638 875 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 GJB5O95377 273 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 GGPS1O95749 300 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 IL9P15248 144 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 ATP4AP20648 1035 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 GARTP22102 1010 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 PTGIRP43119 386 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 NASPP49321 788 aaPredicted RBP5.51□□□□□ -1.53
LINC00550-201ENST00000629293 GPATCH4Q5T3I0 446 aaKnown RBP5.51□□□□□ -1.53
LINC00550-201ENST00000629293 CCDC171Q6TFL3 1326 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 ALYREFQ86V81 257 aaKnown RBP5.51□□□□□ -1.53
LINC00550-201ENST00000629293 CAGE1Q8TC20 777 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 PHOSPHO2Q8TCD6 241 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 AFAP1L1Q8TED9 768 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 KAT2BQ92831 832 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 WNT8BQ93098 351 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 GPRASP2Q96D09 838 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 RAD9AQ99638 391 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 UBAC1Q9BSL1 405 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 RNF41Q9H4P4 317 aaPredicted RBP5.51□□□□□ -1.53
LINC00550-201ENST00000629293 DIAPH3Q9NSV4 1193 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 FAM8A1Q9UBU6 413 aa5.51□□□□□ -1.53
LINC00550-201ENST00000629293 GBF1Q92538 1859 aa5.5□□□□□ -1.53
LINC00550-201ENST00000629293 LINC01553A4QN01 128 aa5.5□□□□□ -1.53
LINC00550-201ENST00000629293 TGFBR3LH3BV60 316 aa5.5□□□□□ -1.53
LINC00550-201ENST00000629293 HIP1O00291 1037 aa5.5□□□□□ -1.53
LINC00550-201ENST00000629293 NOP56O00567 594 aaKnown RBP5.5□□□□□ -1.53
LINC00550-201ENST00000629293 WNT7AO00755 349 aa5.5□□□□□ -1.53
LINC00550-201ENST00000629293 KPNA6O60684 536 aa5.5□□□□□ -1.53
LINC00550-201ENST00000629293 LPXNO60711 386 aa5.5□□□□□ -1.53
LINC00550-201ENST00000629293 PARP1P09874 1014 aaKnown RBP5.5□□□□□ -1.53
LINC00550-201ENST00000629293 USP17L7P0C7H9 530 aa5.5□□□□□ -1.53
LINC00550-201ENST00000629293 RFC2P35250 354 aa5.5□□□□□ -1.53
LINC00550-201ENST00000629293 NKX3-2P78367 333 aa5.5□□□□□ -1.53
LINC00550-201ENST00000629293 ARHGAP1Q07960 439 aa5.5□□□□□ -1.53
LINC00550-201ENST00000629293 TCTN1Q2MV58 587 aa5.5□□□□□ -1.53
LINC00550-201ENST00000629293 HSDL1Q3SXM5 330 aa5.5□□□□□ -1.53
LINC00550-201ENST00000629293 IER5Q5VY09 327 aa5.5□□□□□ -1.53
LINC00550-201ENST00000629293 BTNL9Q6UXG8 535 aa5.5□□□□□ -1.53
LINC00550-201ENST00000629293 PDLIM2Q96JY6 352 aa5.5□□□□□ -1.53
LINC00550-201ENST00000629293 SUSD3Q96L08 255 aa5.5□□□□□ -1.53
LINC00550-201ENST00000629293 IFIH1Q9BYX4 1025 aaKnown RBP5.5□□□□□ -1.53
LINC00550-201ENST00000629293 NPHS2Q9NP85 383 aa5.5□□□□□ -1.53
LINC00550-201ENST00000629293 HELLSQ9NRZ9 838 aa5.5□□□□□ -1.53
LINC00550-201ENST00000629293 GGT7Q9UJ14 662 aa5.5□□□□□ -1.53
LINC00550-201ENST00000629293 LIMCH1Q9UPQ0 1083 aa5.5□□□□□ -1.53
LINC00550-201ENST00000629293 GIPC1O14908 333 aa5.5□□□□□ -1.53
LINC00550-201ENST00000629293 ST3GAL1Q11201 340 aa5.5□□□□□ -1.53
LINC00550-201ENST00000629293 UTP14CQ5TAP6 766 aaKnown RBP5.5□□□□□ -1.53
LINC00550-201ENST00000629293 CNKSR3Q6P9H4 555 aa5.5□□□□□ -1.53
LINC00550-201ENST00000629293 LRSAM1Q6UWE0 723 aa5.5□□□□□ -1.53
LINC00550-201ENST00000629293 MORC4Q8TE76 937 aa5.5□□□□□ -1.53
LINC00550-201ENST00000629293 ATP6V0A1Q93050 837 aa5.5□□□□□ -1.53
LINC00550-201ENST00000629293 RBSNQ9H1K0 784 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 201.9 ms