RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 ETNPPLQ8TBG4 499 aa8.16□□□□□ -1.1
PKP4-217ENST00000628904 AZI2Q9H6S1 392 aa8.16□□□□□ -1.1
PKP4-217ENST00000628904 KLHL11Q9NVR0 708 aa8.16□□□□□ -1.1
PKP4-217ENST00000628904 DMGDHQ9UI17 866 aaKnown RBP8.16□□□□□ -1.1
PKP4-217ENST00000628904 ZNF541Q9H0D2 1346 aa8.16□□□□□ -1.1
PKP4-217ENST00000628904 BUB1BO60566 1050 aaPredicted RBP8.16□□□□□ -1.1
PKP4-217ENST00000628904 P4HBP07237 508 aaKnown RBP8.16□□□□□ -1.1
PKP4-217ENST00000628904 PPP1R2P41236 205 aa8.16□□□□□ -1.1
PKP4-217ENST00000628904 FSTL1Q12841 308 aa8.16□□□□□ -1.1
PKP4-217ENST00000628904 PSMD2Q13200 908 aa8.16□□□□□ -1.1
PKP4-217ENST00000628904 HP1BP3Q5SSJ5 553 aaPredicted RBP8.16□□□□□ -1.1
PKP4-217ENST00000628904 SPOPLQ6IQ16 392 aa8.16□□□□□ -1.1
PKP4-217ENST00000628904 LEKR1Q6ZMV7 388 aa8.16□□□□□ -1.1
PKP4-217ENST00000628904 LRRC55Q6ZSA7 311 aa8.16□□□□□ -1.1
PKP4-217ENST00000628904 SESTD1Q86VW0 696 aa8.16□□□□□ -1.1
PKP4-217ENST00000628904 ZNF507Q8TCN5 953 aa8.16□□□□□ -1.1
PKP4-217ENST00000628904 RABGGTAQ92696 567 aa8.16□□□□□ -1.1
PKP4-217ENST00000628904 FAM49AQ9H0Q0 323 aaPredicted RBP8.16□□□□□ -1.1
PKP4-217ENST00000628904 ACBD3Q9H3P7 528 aa8.16□□□□□ -1.1
PKP4-217ENST00000628904 SYNCQ9H7C4 482 aa8.16□□□□□ -1.1
PKP4-217ENST00000628904 KCNMB3Q9NPA1 279 aa8.16□□□□□ -1.1
PKP4-217ENST00000628904 TYW1Q9NV66 732 aaKnown RBP8.16□□□□□ -1.1
PKP4-217ENST00000628904 MYO3BQ8WXR4 1341 aa8.16□□□□□ -1.1
PKP4-217ENST00000628904 NHSL1Q5SYE7 1610 aa8.16□□□□□ -1.1
PKP4-217ENST00000628904 LTBP4Q8N2S1 1624 aa8.16□□□□□ -1.1
PKP4-217ENST00000628904 GSTTP1A0A1W2PQM5 241 aa8.16□□□□□ -1.1
PKP4-217ENST00000628904 SASH3O75995 380 aa8.16□□□□□ -1.1
PKP4-217ENST00000628904 HEXIM1O94992 359 aaKnown RBP8.16□□□□□ -1.1
PKP4-217ENST00000628904 HDXQ7Z353 690 aa8.16□□□□□ -1.1
PKP4-217ENST00000628904 HAUS1Q96CS2 278 aa8.16□□□□□ -1.1
PKP4-217ENST00000628904 ZBTB45Q96K62 511 aaPredicted RBP8.16□□□□□ -1.1
PKP4-217ENST00000628904 CCDC114Q96M63 670 aa8.16□□□□□ -1.1
PKP4-217ENST00000628904 OSBPL9Q96SU4 736 aa8.16□□□□□ -1.1
PKP4-217ENST00000628904 HEMGNQ9BXL5 484 aa8.16□□□□□ -1.1
PKP4-217ENST00000628904 AS3MTQ9HBK9 375 aa8.16□□□□□ -1.1
PKP4-217ENST00000628904 CD2APQ9Y5K6 639 aa8.16□□□□□ -1.1
PKP4-217ENST00000628904 ADAMTS7Q9UKP4 1686 aa8.15□□□□□ -1.1
PKP4-217ENST00000628904 KLRG2A4D1S0 409 aaPredicted RBP8.15□□□□□ -1.1
PKP4-217ENST00000628904 FOXN3O00409 490 aaPredicted RBP8.15□□□□□ -1.1
PKP4-217ENST00000628904 SERPING1P05155 500 aa8.15□□□□□ -1.1
PKP4-217ENST00000628904 CYP2C8P10632 490 aa8.15□□□□□ -1.1
PKP4-217ENST00000628904 DHX9Q08211 1270 aaKnown RBP8.15□□□□□ -1.1
PKP4-217ENST00000628904 ITGB3BPQ13352 177 aaPredicted RBP8.15□□□□□ -1.1
PKP4-217ENST00000628904 CASP8Q14790 479 aa8.15□□□□□ -1.1
PKP4-217ENST00000628904 TRADDQ15628 312 aa8.15□□□□□ -1.1
PKP4-217ENST00000628904 GNPTABQ3T906 1256 aa8.15□□□□□ -1.1
PKP4-217ENST00000628904 CFAP221Q4G0U5 840 aa8.15□□□□□ -1.1
PKP4-217ENST00000628904 SYCP2LQ5T4T6 812 aa8.15□□□□□ -1.1
PKP4-217ENST00000628904 MAP1SQ66K74 1059 aaPredicted RBP8.15□□□□□ -1.1
PKP4-217ENST00000628904 AADACL2Q6P093 401 aa8.15□□□□□ -1.1
PKP4-217ENST00000628904 SLC20A1Q8WUM9 679 aa8.15□□□□□ -1.1
PKP4-217ENST00000628904 RBM12Q9NTZ6 932 aaKnown RBP8.15□□□□□ -1.1
PKP4-217ENST00000628904 AHDC1Q5TGY3 1603 aaPredicted RBP8.15□□□□□ -1.1
PKP4-217ENST00000628904 A0A1W2PQC6 194 aa8.15□□□□□ -1.1
PKP4-217ENST00000628904 ICAM1P05362 532 aa8.15□□□□□ -1.1
PKP4-217ENST00000628904 PON1P27169 355 aa8.15□□□□□ -1.1
PKP4-217ENST00000628904 BACE1P56817 501 aa8.15□□□□□ -1.1
PKP4-217ENST00000628904 HDLBPQ00341 1268 aaKnown RBP8.15□□□□□ -1.1
PKP4-217ENST00000628904 SMAD1Q15797 465 aaKnown RBP8.15□□□□□ -1.1
PKP4-217ENST00000628904 LY6KQ17RY6 165 aa8.15□□□□□ -1.1
PKP4-217ENST00000628904 TMEM119Q4V9L6 283 aa8.15□□□□□ -1.1
PKP4-217ENST00000628904 LLGL2Q6P1M3 1020 aa8.15□□□□□ -1.1
PKP4-217ENST00000628904 ZNF571Q7Z3V5 609 aaPredicted RBP8.15□□□□□ -1.1
PKP4-217ENST00000628904 RHPN2Q8IUC4 686 aa8.15□□□□□ -1.1
PKP4-217ENST00000628904 SLC7A3Q8WY07 619 aa8.15□□□□□ -1.1
PKP4-217ENST00000628904 MKL1Q969V6 931 aa8.15□□□□□ -1.1
PKP4-217ENST00000628904 CELF4Q9BZC1 486 aaKnown RBP8.15□□□□□ -1.1
PKP4-217ENST00000628904 FHDC1Q9C0D6 1143 aaPredicted RBP8.15□□□□□ -1.1
PKP4-217ENST00000628904 L2HGDHQ9H9P8 463 aa8.15□□□□□ -1.1
PKP4-217ENST00000628904 AGPAT3Q9NRZ7 376 aa8.15□□□□□ -1.1
PKP4-217ENST00000628904 PLAGL2Q9UPG8 496 aa8.15□□□□□ -1.1
PKP4-217ENST00000628904 PLCH1Q4KWH8 1693 aa8.15□□□□□ -1.1
PKP4-217ENST00000628904 ROBO3Q96MS0 1386 aa8.15□□□□□ -1.1
PKP4-217ENST00000628904 WDR64B1ANS9 1081 aa8.15□□□□□ -1.11
PKP4-217ENST00000628904 K7ERI5 159 aa8.15□□□□□ -1.11
PKP4-217ENST00000628904 GNA14O95837 355 aa8.15□□□□□ -1.11
PKP4-217ENST00000628904 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.15□□□□□ -1.11
PKP4-217ENST00000628904 GMCL1P1Q8NEA9 526 aa8.15□□□□□ -1.11
PKP4-217ENST00000628904 NSUN6Q8TEA1 469 aaKnown RBP8.15□□□□□ -1.11
PKP4-217ENST00000628904 COPS5Q92905 334 aa8.15□□□□□ -1.11
PKP4-217ENST00000628904 ACSF2Q96CM8 615 aaPredicted RBP8.15□□□□□ -1.11
PKP4-217ENST00000628904 PDCD2LQ9BRP1 358 aa8.15□□□□□ -1.11
PKP4-217ENST00000628904 TARS2Q9BW92 718 aaKnown RBP8.15□□□□□ -1.11
PKP4-217ENST00000628904 CEP72Q9P209 647 aa8.15□□□□□ -1.11
PKP4-217ENST00000628904 AMACRQ9UHK6 382 aa8.15□□□□□ -1.11
PKP4-217ENST00000628904 LRRC10BA6NIK2 292 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 VWA5AO00534 786 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 SMARCA1P28370 1054 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 PBX1P40424 430 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 SLCO1A2P46721 670 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 VAMP7P51809 220 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 MRPS9P82933 396 aaKnown RBP8.14□□□□□ -1.11
PKP4-217ENST00000628904 EPHA7Q15375 998 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 WHAMMP3Q1A5X7 153 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 MAP9Q49MG5 647 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 OTUD6AQ7L8S5 288 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 RNF169Q8NCN4 708 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 AGBL3Q8NEM8 1001 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 C7orf43Q8WVR3 580 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 LENG9Q96B70 501 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms