RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 RINT1Q6NUQ1 792 aa10.95□□□□□ -0.66
SOX2-OT-249ENST00000628810 PADI6Q6TGC4 694 aa10.95□□□□□ -0.66
SOX2-OT-249ENST00000628810 MTHFD1LQ6UB35 978 aa10.95□□□□□ -0.66
SOX2-OT-249ENST00000628810 C1orf186Q6ZWK4 172 aa10.95□□□□□ -0.66
SOX2-OT-249ENST00000628810 SH3RF1Q7Z6J0 888 aa10.95□□□□□ -0.66
SOX2-OT-249ENST00000628810 RPAINQ86UA6 219 aa10.95□□□□□ -0.66
SOX2-OT-249ENST00000628810 SERINC5Q86VE9 423 aa10.95□□□□□ -0.66
SOX2-OT-249ENST00000628810 ELOA2Q8IYF1 753 aaPredicted RBP10.95□□□□□ -0.66
SOX2-OT-249ENST00000628810 MCPH1Q8NEM0 835 aa10.95□□□□□ -0.66
SOX2-OT-249ENST00000628810 TRAPPC12Q8WVT3 735 aa10.95□□□□□ -0.66
SOX2-OT-249ENST00000628810 SLC7A3Q8WY07 619 aa10.95□□□□□ -0.66
SOX2-OT-249ENST00000628810 CCDC43Q96MW1 224 aaKnown RBP10.95□□□□□ -0.66
SOX2-OT-249ENST00000628810 TOX2Q96NM4 488 aa10.95□□□□□ -0.66
SOX2-OT-249ENST00000628810 MTRQ99707 1265 aa10.95□□□□□ -0.66
SOX2-OT-249ENST00000628810 RUSC1Q9BVN2 902 aa10.95□□□□□ -0.66
SOX2-OT-249ENST00000628810 TIPINQ9BVW5 301 aa10.95□□□□□ -0.66
SOX2-OT-249ENST00000628810 ATP6V0A4Q9HBG4 840 aa10.95□□□□□ -0.66
SOX2-OT-249ENST00000628810 XPNPEP1Q9NQW7 623 aa10.95□□□□□ -0.66
SOX2-OT-249ENST00000628810 PCDHA2Q9Y5H9 948 aa10.95□□□□□ -0.66
SOX2-OT-249ENST00000628810 A0A087WWV3 80 aa10.94□□□□□ -0.66
SOX2-OT-249ENST00000628810 SMIM35A0A1B0GVV1 85 aa10.94□□□□□ -0.66
SOX2-OT-249ENST00000628810 TREHO43280 583 aa10.94□□□□□ -0.66
SOX2-OT-249ENST00000628810 B4GALT4O60513 344 aa10.94□□□□□ -0.66
SOX2-OT-249ENST00000628810 USO1O60763 962 aaKnown RBP10.94□□□□□ -0.66
SOX2-OT-249ENST00000628810 MBD3O95983 291 aa10.94□□□□□ -0.66
SOX2-OT-249ENST00000628810 MYL1P05976 194 aa10.94□□□□□ -0.66
SOX2-OT-249ENST00000628810 KLRC1P26715 233 aa10.94□□□□□ -0.66
SOX2-OT-249ENST00000628810 POLGP54098 1239 aaPredicted RBP10.94□□□□□ -0.66
SOX2-OT-249ENST00000628810 RBL2Q08999 1139 aa10.94□□□□□ -0.66
SOX2-OT-249ENST00000628810 PTK7Q13308 1070 aa10.94□□□□□ -0.66
SOX2-OT-249ENST00000628810 MCM6Q14566 821 aa10.94□□□□□ -0.66
SOX2-OT-249ENST00000628810 EMC2Q15006 297 aa10.94□□□□□ -0.66
SOX2-OT-249ENST00000628810 ARSHQ5FYA8 562 aa10.94□□□□□ -0.66
SOX2-OT-249ENST00000628810 FAM47CQ5HY64 1035 aa10.94□□□□□ -0.66
SOX2-OT-249ENST00000628810 TAF2Q6P1X5 1199 aa10.94□□□□□ -0.66
SOX2-OT-249ENST00000628810 KRBA2Q6ZNG9 492 aa10.94□□□□□ -0.66
SOX2-OT-249ENST00000628810 SV2BQ7L1I2 683 aa10.94□□□□□ -0.66
SOX2-OT-249ENST00000628810 TRMT1LQ7Z2T5 733 aaKnown RBP10.94□□□□□ -0.66
SOX2-OT-249ENST00000628810 GPBP1Q86WP2 473 aa10.94□□□□□ -0.66
SOX2-OT-249ENST00000628810 CEP57L1Q8IYX8 460 aa10.94□□□□□ -0.66
SOX2-OT-249ENST00000628810 RETREG2Q8NC44 543 aa10.94□□□□□ -0.66
SOX2-OT-249ENST00000628810 GPT2Q8TD30 523 aa10.94□□□□□ -0.66
SOX2-OT-249ENST00000628810 PPP1R13LQ8WUF5 828 aa10.94□□□□□ -0.66
SOX2-OT-249ENST00000628810 VTI1AQ96AJ9 217 aa10.94□□□□□ -0.66
SOX2-OT-249ENST00000628810 SH2D3AQ9BRG2 576 aa10.94□□□□□ -0.66
SOX2-OT-249ENST00000628810 PANK2Q9BZ23 570 aa10.94□□□□□ -0.66
SOX2-OT-249ENST00000628810 LRRC27Q9C0I9 530 aa10.94□□□□□ -0.66
SOX2-OT-249ENST00000628810 SERTAD1Q9UHV2 236 aa10.94□□□□□ -0.66
SOX2-OT-249ENST00000628810 ODF2LQ9ULJ1 636 aa10.94□□□□□ -0.66
SOX2-OT-249ENST00000628810 DNAH12Q6ZR08 3092 aa10.93□□□□□ -0.66
SOX2-OT-249ENST00000628810 FRMD3A2A2Y4 597 aa10.93□□□□□ -0.66
SOX2-OT-249ENST00000628810 MYMKA6NI61 221 aa10.93□□□□□ -0.66
SOX2-OT-249ENST00000628810 KINO60870 393 aaKnown RBP10.93□□□□□ -0.66
SOX2-OT-249ENST00000628810 CAND2O75155 1236 aa10.93□□□□□ -0.66
SOX2-OT-249ENST00000628810 ZNF131P52739 623 aa10.93□□□□□ -0.66
SOX2-OT-249ENST00000628810 SOX10P56693 466 aa10.93□□□□□ -0.66
SOX2-OT-249ENST00000628810 RTP1P59025 263 aa10.93□□□□□ -0.66
SOX2-OT-249ENST00000628810 CHMP4BP1P59074 171 aa10.93□□□□□ -0.66
SOX2-OT-249ENST00000628810 IGBP1P78318 339 aa10.93□□□□□ -0.66
SOX2-OT-249ENST00000628810 ZNF200P98182 395 aaPredicted RBP10.93□□□□□ -0.66
SOX2-OT-249ENST00000628810 AMPD3Q01432 767 aa10.93□□□□□ -0.66
SOX2-OT-249ENST00000628810 MAPK7Q13164 816 aa10.93□□□□□ -0.66
SOX2-OT-249ENST00000628810 PTGISQ16647 500 aa10.93□□□□□ -0.66
SOX2-OT-249ENST00000628810 LRRC26Q2I0M4 334 aa10.93□□□□□ -0.66
SOX2-OT-249ENST00000628810 TRIM71Q2Q1W2 868 aaKnown RBP10.93□□□□□ -0.66
SOX2-OT-249ENST00000628810 KANK3Q6NY19 840 aa10.93□□□□□ -0.66
SOX2-OT-249ENST00000628810 CNNM3Q8NE01 707 aa10.93□□□□□ -0.66
SOX2-OT-249ENST00000628810 TCP11Q8WWU5 503 aa10.93□□□□□ -0.66
SOX2-OT-249ENST00000628810 DHX38Q92620 1227 aaKnown RBP10.93□□□□□ -0.66
SOX2-OT-249ENST00000628810 DNAJC19Q96DA6 116 aa10.93□□□□□ -0.66
SOX2-OT-249ENST00000628810 PAGE5Q96GU1 130 aa10.93□□□□□ -0.66
SOX2-OT-249ENST00000628810 C7orf25Q9BPX7 421 aa10.93□□□□□ -0.66
SOX2-OT-249ENST00000628810 TRIM9Q9C026 710 aa10.93□□□□□ -0.66
SOX2-OT-249ENST00000628810 TRMT13Q9NUP7 481 aaKnown RBP10.93□□□□□ -0.66
SOX2-OT-249ENST00000628810 DACT1Q9NYF0 836 aa10.93□□□□□ -0.66
SOX2-OT-249ENST00000628810 ALPK3Q96L96 1907 aa10.93□□□□□ -0.66
SOX2-OT-249ENST00000628810 KIAA0100Q14667 2235 aaKnown RBP10.93□□□□□ -0.66
SOX2-OT-249ENST00000628810 TANC1Q9C0D5 1861 aa10.93□□□□□ -0.66
SOX2-OT-249ENST00000628810 CCDC85CA6NKD9 419 aa10.92□□□□□ -0.66
SOX2-OT-249ENST00000628810 SSBP05455 408 aaKnown RBP eCLIP10.92□□□□□ -0.66
SOX2-OT-249ENST00000628810 CYP2C9P11712 490 aa10.92□□□□□ -0.66
SOX2-OT-249ENST00000628810 TMOD1P28289 359 aa10.92□□□□□ -0.66
SOX2-OT-249ENST00000628810 ARL2P36404 184 aa10.92□□□□□ -0.66
SOX2-OT-249ENST00000628810 CLCN3P51790 818 aa10.92□□□□□ -0.66
SOX2-OT-249ENST00000628810 MDM2Q00987 491 aaPredicted RBP10.92□□□□□ -0.66
SOX2-OT-249ENST00000628810 DRP2Q13474 957 aa10.92□□□□□ -0.66
SOX2-OT-249ENST00000628810 GIT2Q14161 759 aa10.92□□□□□ -0.66
SOX2-OT-249ENST00000628810 TRIM60Q495X7 471 aa10.92□□□□□ -0.66
SOX2-OT-249ENST00000628810 IER5Q5VY09 327 aa10.92□□□□□ -0.66
SOX2-OT-249ENST00000628810 EFCAB12Q6NXP0 572 aa10.92□□□□□ -0.66
SOX2-OT-249ENST00000628810 RUFY4Q6ZNE9 571 aa10.92□□□□□ -0.66
SOX2-OT-249ENST00000628810 KIAA0319LQ8IZA0 1049 aa10.92□□□□□ -0.66
SOX2-OT-249ENST00000628810 DAW1Q8N136 415 aa10.92□□□□□ -0.66
SOX2-OT-249ENST00000628810 NME8Q8N427 588 aa10.92□□□□□ -0.66
SOX2-OT-249ENST00000628810 LRRC71Q8N4P6 559 aa10.92□□□□□ -0.66
SOX2-OT-249ENST00000628810 DDX12PQ92771 950 aa10.92□□□□□ -0.66
SOX2-OT-249ENST00000628810 KIFAP3Q92845 792 aa10.92□□□□□ -0.66
SOX2-OT-249ENST00000628810 KCNN1Q92952 543 aa10.92□□□□□ -0.66
SOX2-OT-249ENST00000628810 WNT8BQ93098 351 aa10.92□□□□□ -0.66
SOX2-OT-249ENST00000628810 ZBTB10Q96DT7 871 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms