RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 TBKBP1A7MCY6 615 aa13.6□□□□□ -0.23
UBR1-212ENST00000627960 TBX3O15119 743 aa13.6□□□□□ -0.23
UBR1-212ENST00000627960 NCK2O43639 380 aa13.6□□□□□ -0.23
UBR1-212ENST00000627960 MAFO75444 373 aaPredicted RBP13.6□□□□□ -0.23
UBR1-212ENST00000627960 ITGB1P05556 798 aa13.6□□□□□ -0.23
UBR1-212ENST00000627960 CENPBP07199 599 aaPredicted RBP13.6□□□□□ -0.23
UBR1-212ENST00000627960 DARSP14868 501 aaKnown RBP13.6□□□□□ -0.23
UBR1-212ENST00000627960 ZSCAN20P17040 1043 aaPredicted RBP13.6□□□□□ -0.23
UBR1-212ENST00000627960 KRT2P35908 639 aa13.6□□□□□ -0.23
UBR1-212ENST00000627960 CDC42EP1Q00587 391 aa13.6□□□□□ -0.23
UBR1-212ENST00000627960 NR5A1Q13285 461 aa13.6□□□□□ -0.23
UBR1-212ENST00000627960 DRP2Q13474 957 aa13.6□□□□□ -0.23
UBR1-212ENST00000627960 CAMK1Q14012 370 aa13.6□□□□□ -0.23
UBR1-212ENST00000627960 ANO5Q75V66 913 aa13.6□□□□□ -0.23
UBR1-212ENST00000627960 KLHL23Q8NBE8 558 aa13.6□□□□□ -0.23
UBR1-212ENST00000627960 NSUN7Q8NE18 718 aaKnown RBP13.6□□□□□ -0.23
UBR1-212ENST00000627960 NLRP7Q8WX94 980 aa13.6□□□□□ -0.23
UBR1-212ENST00000627960 HAS1Q92839 578 aa13.6□□□□□ -0.23
UBR1-212ENST00000627960 TNFRSF25Q93038 417 aa13.6□□□□□ -0.23
UBR1-212ENST00000627960 ZNF668Q96K58 619 aaPredicted RBP13.6□□□□□ -0.23
UBR1-212ENST00000627960 SH2D3AQ9BRG2 576 aa13.6□□□□□ -0.23
UBR1-212ENST00000627960 FAM205CA6NFA0 338 aa13.59□□□□□ -0.23
UBR1-212ENST00000627960 MARCH6O60337 910 aa13.59□□□□□ -0.23
UBR1-212ENST00000627960 DKC1O60832 514 aaKnown RBP eCLIP13.59□□□□□ -0.23
UBR1-212ENST00000627960 P4HBP07237 508 aaKnown RBP13.59□□□□□ -0.23
UBR1-212ENST00000627960 DNAJB1P25685 340 aa13.59□□□□□ -0.23
UBR1-212ENST00000627960 QARSP47897 775 aaKnown RBP13.59□□□□□ -0.23
UBR1-212ENST00000627960 DNM2P50570 870 aa13.59□□□□□ -0.23
UBR1-212ENST00000627960 HYAL1Q12794 435 aa13.59□□□□□ -0.23
UBR1-212ENST00000627960 PUS10Q3MIT2 529 aaKnown RBP13.59□□□□□ -0.23
UBR1-212ENST00000627960 PTCRAQ6ISU1 281 aaPredicted RBP13.59□□□□□ -0.23
UBR1-212ENST00000627960 SCLT1Q96NL6 688 aa13.59□□□□□ -0.23
UBR1-212ENST00000627960 GCOM2Q9BZD3 368 aaPredicted RBP13.59□□□□□ -0.23
UBR1-212ENST00000627960 BRMS1Q9HCU9 246 aa13.59□□□□□ -0.23
UBR1-212ENST00000627960 CLDND1Q9NY35 253 aa13.59□□□□□ -0.23
UBR1-212ENST00000627960 GRXCR2A6NFK2 248 aa13.58□□□□□ -0.24
UBR1-212ENST00000627960 H3BQ06 376 aaPredicted RBP13.58□□□□□ -0.24
UBR1-212ENST00000627960 JAK2O60674 1132 aa13.58□□□□□ -0.24
UBR1-212ENST00000627960 BAG4O95429 457 aaKnown RBP13.58□□□□□ -0.24
UBR1-212ENST00000627960 FGFR1P11362 822 aa13.58□□□□□ -0.24
UBR1-212ENST00000627960 FGFR4P22455 802 aa13.58□□□□□ -0.24
UBR1-212ENST00000627960 LTBRP36941 435 aa13.58□□□□□ -0.24
UBR1-212ENST00000627960 EPHA7Q15375 998 aa13.58□□□□□ -0.24
UBR1-212ENST00000627960 CTC1Q2NKJ3 1217 aa13.58□□□□□ -0.24
UBR1-212ENST00000627960 SPOUT1Q5T280 376 aaKnown RBP13.58□□□□□ -0.24
UBR1-212ENST00000627960 PLA2G4FQ68DD2 849 aa13.58□□□□□ -0.24
UBR1-212ENST00000627960 EP400NLQ6ZTU2 488 aa13.58□□□□□ -0.24
UBR1-212ENST00000627960 ECHDC2Q86YB7 292 aa13.58□□□□□ -0.24
UBR1-212ENST00000627960 POTEDQ86YR6 584 aa13.58□□□□□ -0.24
UBR1-212ENST00000627960 POF1BQ8WVV4 589 aa13.58□□□□□ -0.24
UBR1-212ENST00000627960 JPH2Q9BR39 696 aaPredicted RBP13.58□□□□□ -0.24
UBR1-212ENST00000627960 CWH43Q9H720 699 aa13.58□□□□□ -0.24
UBR1-212ENST00000627960 CYP26B1Q9NR63 512 aa13.58□□□□□ -0.24
UBR1-212ENST00000627960 AAASQ9NRG9 546 aa13.58□□□□□ -0.24
UBR1-212ENST00000627960 RNF19AQ9NV58 838 aa13.58□□□□□ -0.24
UBR1-212ENST00000627960 TYW1Q9NV66 732 aaKnown RBP13.58□□□□□ -0.24
UBR1-212ENST00000627960 SUCLA2Q9P2R7 463 aaPredicted RBP13.58□□□□□ -0.24
UBR1-212ENST00000627960 PCDHB12Q9Y5F1 795 aa13.58□□□□□ -0.24
UBR1-212ENST00000627960 ARID2Q68CP9 1835 aa13.57□□□□□ -0.24
UBR1-212ENST00000627960 A0A087WZ62 844 aa13.57□□□□□ -0.24
UBR1-212ENST00000627960 BTBD18B2RXH4 712 aa13.57□□□□□ -0.24
UBR1-212ENST00000627960 HOXA2O43364 376 aa13.57□□□□□ -0.24
UBR1-212ENST00000627960 CSDE1O75534 798 aaKnown RBP13.57□□□□□ -0.24
UBR1-212ENST00000627960 CSPG5O95196 566 aa13.57□□□□□ -0.24
UBR1-212ENST00000627960 IL9P15248 144 aa13.57□□□□□ -0.24
UBR1-212ENST00000627960 NPEPPSP55786 919 aa13.57□□□□□ -0.24
UBR1-212ENST00000627960 ST3GAL1Q11201 340 aa13.57□□□□□ -0.24
UBR1-212ENST00000627960 NCAPH2Q6IBW4 605 aa13.57□□□□□ -0.24
UBR1-212ENST00000627960 ZNF410Q86VK4 478 aa13.57□□□□□ -0.24
UBR1-212ENST00000627960 RHPN2Q8IUC4 686 aa13.57□□□□□ -0.24
UBR1-212ENST00000627960 FAM178BQ8IXR5 827 aa13.57□□□□□ -0.24
UBR1-212ENST00000627960 C4orf19Q8IY42 314 aa13.57□□□□□ -0.24
UBR1-212ENST00000627960 SLFN12Q8IYM2 578 aa13.57□□□□□ -0.24
UBR1-212ENST00000627960 CASD1Q96PB1 797 aa13.57□□□□□ -0.24
UBR1-212ENST00000627960 FDXACB1Q9BRP7 624 aaPredicted RBP13.57□□□□□ -0.24
UBR1-212ENST00000627960 TMEM117Q9H0C3 514 aa13.57□□□□□ -0.24
UBR1-212ENST00000627960 IGFLR1Q9H665 355 aa13.57□□□□□ -0.24
UBR1-212ENST00000627960 CHST12Q9NRB3 414 aa13.57□□□□□ -0.24
UBR1-212ENST00000627960 WRAP73Q9P2S5 460 aaPredicted RBP13.57□□□□□ -0.24
UBR1-212ENST00000627960 PPME1Q9Y570 386 aa13.57□□□□□ -0.24
UBR1-212ENST00000627960 A0A0U1RQF3 1178 aa13.56□□□□□ -0.24
UBR1-212ENST00000627960 EOMESO95936 686 aa13.56□□□□□ -0.24
UBR1-212ENST00000627960 GTF2F1P35269 517 aaKnown RBP eCLIP13.56□□□□□ -0.24
UBR1-212ENST00000627960 IRS1P35568 1242 aa13.56□□□□□ -0.24
UBR1-212ENST00000627960 UBE3AQ05086 875 aa13.56□□□□□ -0.24
UBR1-212ENST00000627960 SPIRE1Q08AE8 756 aa13.56□□□□□ -0.24
UBR1-212ENST00000627960 ADAM15Q13444 863 aa13.56□□□□□ -0.24
UBR1-212ENST00000627960 TRIM29Q14134 588 aa13.56□□□□□ -0.24
UBR1-212ENST00000627960 CSPP1Q1MSJ5 1256 aa13.56□□□□□ -0.24
UBR1-212ENST00000627960 LRRC55Q6ZSA7 311 aa13.56□□□□□ -0.24
UBR1-212ENST00000627960 KSR1Q8IVT5 923 aa13.56□□□□□ -0.24
UBR1-212ENST00000627960 DIS3L2Q8IYB7 885 aaKnown RBP13.56□□□□□ -0.24
UBR1-212ENST00000627960 EXOC8Q8IYI6 725 aa13.56□□□□□ -0.24
UBR1-212ENST00000627960 ZNF579Q8NAF0 562 aaKnown RBP13.56□□□□□ -0.24
UBR1-212ENST00000627960 COLGALT1Q8NBJ5 622 aa13.56□□□□□ -0.24
UBR1-212ENST00000627960 PPP2R3CQ969Q6 453 aa13.56□□□□□ -0.24
UBR1-212ENST00000627960 DYDC2Q96IM9 177 aa13.56□□□□□ -0.24
UBR1-212ENST00000627960 CEP170P1Q96L14 293 aa13.56□□□□□ -0.24
UBR1-212ENST00000627960 INO80BQ9C086 356 aaPredicted RBP13.56□□□□□ -0.24
UBR1-212ENST00000627960 CD320Q9NPF0 282 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms