RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 ACAP1Q15027 740 aa15.93■□□□□ 0.14
SNX1-214ENST00000625244 NONOQ15233 471 aaKnown RBP eCLIP15.93■□□□□ 0.14
SNX1-214ENST00000625244 IFIT1BQ5T764 474 aaKnown RBP15.93■□□□□ 0.14
SNX1-214ENST00000625244 TNPO1Q92973 898 aaKnown RBP15.93■□□□□ 0.14
SNX1-214ENST00000625244 TMEM169Q96HH4 297 aa15.93■□□□□ 0.14
SNX1-214ENST00000625244 CDHR1Q96JP9 859 aa15.93■□□□□ 0.14
SNX1-214ENST00000625244 OSMRQ99650 979 aa15.93■□□□□ 0.14
SNX1-214ENST00000625244 PARD6AQ9NPB6 346 aa15.93■□□□□ 0.14
SNX1-214ENST00000625244 SMG5Q9UPR3 1016 aaKnown RBP15.93■□□□□ 0.14
SNX1-214ENST00000625244 WDFY3Q8IZQ1 3526 aa15.93■□□□□ 0.14
SNX1-214ENST00000625244 SPDYE4A6NLX3 237 aa15.92■□□□□ 0.14
SNX1-214ENST00000625244 GBP2P32456 591 aaPredicted RBP15.92■□□□□ 0.14
SNX1-214ENST00000625244 ALDH7A1P49419 539 aaKnown RBP15.92■□□□□ 0.14
SNX1-214ENST00000625244 NT5C2P49902 561 aa15.92■□□□□ 0.14
SNX1-214ENST00000625244 KIZQ2M2Z5 673 aa15.92■□□□□ 0.14
SNX1-214ENST00000625244 DCLRE1AQ6PJP8 1040 aa15.92■□□□□ 0.14
SNX1-214ENST00000625244 PLPPR4Q7Z2D5 763 aa15.92■□□□□ 0.14
SNX1-214ENST00000625244 ECHDC2Q86YB7 292 aa15.92■□□□□ 0.14
SNX1-214ENST00000625244 RNF169Q8NCN4 708 aa15.92■□□□□ 0.14
SNX1-214ENST00000625244 SMARCC2Q8TAQ2 1214 aa15.92■□□□□ 0.14
SNX1-214ENST00000625244 SECISBP2LQ93073 1101 aaKnown RBP15.92■□□□□ 0.14
SNX1-214ENST00000625244 EPS15L1Q9UBC2 864 aa15.92■□□□□ 0.14
SNX1-214ENST00000625244 PCDHGA2Q9Y5H1 932 aa15.92■□□□□ 0.14
SNX1-214ENST00000625244 SALL3Q9BXA9 1300 aa15.92■□□□□ 0.14
SNX1-214ENST00000625244 C2orf16Q68DN1 1984 aa15.91■□□□□ 0.14
SNX1-214ENST00000625244 MEIS2O14770 477 aa15.91■□□□□ 0.14
SNX1-214ENST00000625244 STAT5BP51692 787 aa15.91■□□□□ 0.14
SNX1-214ENST00000625244 CRYBB1P53674 252 aaPredicted RBP15.91■□□□□ 0.14
SNX1-214ENST00000625244 MTMR1Q13613 665 aa15.91■□□□□ 0.14
SNX1-214ENST00000625244 GIT2Q14161 759 aa15.91■□□□□ 0.14
SNX1-214ENST00000625244 PTPN14Q15678 1187 aa15.91■□□□□ 0.14
SNX1-214ENST00000625244 C15orf39Q6ZRI6 1047 aa15.91■□□□□ 0.14
SNX1-214ENST00000625244 PPFIBP1Q86W92 1011 aa15.91■□□□□ 0.14
SNX1-214ENST00000625244 HELQQ8TDG4 1101 aa15.91■□□□□ 0.14
SNX1-214ENST00000625244 ATRIPQ8WXE1 791 aa15.91■□□□□ 0.14
SNX1-214ENST00000625244 PIBF1Q8WXW3 757 aa15.91■□□□□ 0.14
SNX1-214ENST00000625244 BORCS6Q96GS4 357 aa15.91■□□□□ 0.14
SNX1-214ENST00000625244 MYADMQ96S97 322 aa15.91■□□□□ 0.14
SNX1-214ENST00000625244 UBAC1Q9BSL1 405 aa15.91■□□□□ 0.14
SNX1-214ENST00000625244 EPC1Q9H2F5 836 aa15.91■□□□□ 0.14
SNX1-214ENST00000625244 JPH1Q9HDC5 661 aaPredicted RBP15.91■□□□□ 0.14
SNX1-214ENST00000625244 SH2B1Q9NRF2 756 aaPredicted RBP15.91■□□□□ 0.14
SNX1-214ENST00000625244 SPATA6Q9NWH7 488 aaPredicted RBP15.91■□□□□ 0.14
SNX1-214ENST00000625244 FBXO4Q9UKT5 387 aa15.91■□□□□ 0.14
SNX1-214ENST00000625244 UBIAD1Q9Y5Z9 338 aa15.91■□□□□ 0.14
SNX1-214ENST00000625244 CLCN4P51793 760 aa15.9■□□□□ 0.14
SNX1-214ENST00000625244 POLGP54098 1239 aaPredicted RBP15.9■□□□□ 0.14
SNX1-214ENST00000625244 CSTF1Q05048 431 aaKnown RBP15.9■□□□□ 0.14
SNX1-214ENST00000625244 WTAPQ15007 396 aa15.9■□□□□ 0.14
SNX1-214ENST00000625244 SEC23AQ15436 765 aa15.9■□□□□ 0.14
SNX1-214ENST00000625244 C20orf194Q5TEA3 1177 aa15.9■□□□□ 0.14
SNX1-214ENST00000625244 DDX53Q86TM3 631 aaKnown RBP15.9■□□□□ 0.14
SNX1-214ENST00000625244 ZBTB44Q8NCP5 570 aa15.9■□□□□ 0.14
SNX1-214ENST00000625244 ST13P5Q8NFI4 369 aaPredicted RBP15.9■□□□□ 0.14
SNX1-214ENST00000625244 BCL7CQ8WUZ0 217 aaPredicted RBP15.9■□□□□ 0.14
SNX1-214ENST00000625244 SLC9A2Q9UBY0 812 aa15.9■□□□□ 0.14
SNX1-214ENST00000625244 PIK3CDO00329 1044 aa15.89■□□□□ 0.13
SNX1-214ENST00000625244 LAMTOR5O43504 91 aa15.89■□□□□ 0.13
SNX1-214ENST00000625244 GPR32O75388 356 aa15.89■□□□□ 0.13
SNX1-214ENST00000625244 STARD6P59095 220 aa15.89■□□□□ 0.13
SNX1-214ENST00000625244 ACTR2P61160 394 aa15.89■□□□□ 0.13
SNX1-214ENST00000625244 GRM4Q14833 912 aa15.89■□□□□ 0.13
SNX1-214ENST00000625244 CUL5Q93034 780 aa15.89■□□□□ 0.13
SNX1-214ENST00000625244 NXPE3Q969Y0 559 aa15.89■□□□□ 0.13
SNX1-214ENST00000625244 IGSF21Q96ID5 467 aa15.89■□□□□ 0.13
SNX1-214ENST00000625244 KLHL5Q96PQ7 755 aa15.89■□□□□ 0.13
SNX1-214ENST00000625244 VN1R3Q9BXE9 311 aa15.89■□□□□ 0.13
SNX1-214ENST00000625244 WDR6Q9NNW5 1121 aaKnown RBP15.89■□□□□ 0.13
SNX1-214ENST00000625244 NBEAQ8NFP9 2946 aa15.89■□□□□ 0.13
SNX1-214ENST00000625244 SLC30A4O14863 429 aa15.88■□□□□ 0.13
SNX1-214ENST00000625244 LILRB5O75023 590 aa15.88■□□□□ 0.13
SNX1-214ENST00000625244 ZC3H11AO75152 810 aaKnown RBP eCLIP15.88■□□□□ 0.13
SNX1-214ENST00000625244 VTNP04004 478 aa15.88■□□□□ 0.13
SNX1-214ENST00000625244 KLRC2P26717 231 aa15.88■□□□□ 0.13
SNX1-214ENST00000625244 DMWDQ09019 674 aa15.88■□□□□ 0.13
SNX1-214ENST00000625244 ZNF598Q86UK7 904 aaKnown RBP15.88■□□□□ 0.13
SNX1-214ENST00000625244 JADE2Q9NQC1 790 aa15.88■□□□□ 0.13
SNX1-214ENST00000625244 SLC2A4RGQ9NR83 387 aa15.88■□□□□ 0.13
SNX1-214ENST00000625244 ZSCAN32Q9NX65 697 aa15.88■□□□□ 0.13
SNX1-214ENST00000625244 MTF2Q9Y483 593 aaPredicted RBP15.88■□□□□ 0.13
SNX1-214ENST00000625244 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.88■□□□□ 0.13
SNX1-214ENST00000625244 DSPP15924 2871 aaKnown RBP15.87■□□□□ 0.13
SNX1-214ENST00000625244 ZBTB42B2RXF5 422 aa15.87■□□□□ 0.13
SNX1-214ENST00000625244 CNPP09543 421 aaKnown RBP15.87■□□□□ 0.13
SNX1-214ENST00000625244 ZSCAN20P17040 1043 aaPredicted RBP15.87■□□□□ 0.13
SNX1-214ENST00000625244 CMASQ8NFW8 434 aaPredicted RBP15.87■□□□□ 0.13
SNX1-214ENST00000625244 STAMQ92783 540 aa15.87■□□□□ 0.13
SNX1-214ENST00000625244 NELL1Q92832 810 aa15.87■□□□□ 0.13
SNX1-214ENST00000625244 COL26A1Q96A83 441 aa15.87■□□□□ 0.13
SNX1-214ENST00000625244 MRPL9Q9BYD2 267 aaKnown RBP15.87■□□□□ 0.13
SNX1-214ENST00000625244 BCO2Q9BYV7 579 aa15.87■□□□□ 0.13
SNX1-214ENST00000625244 ANGPTL2Q9UKU9 493 aa15.87■□□□□ 0.13
SNX1-214ENST00000625244 CLUHO75153 1309 aa15.87■□□□□ 0.13
SNX1-214ENST00000625244 DOCK8Q8NF50 2099 aa15.87■□□□□ 0.13
SNX1-214ENST00000625244 COL4A3Q01955 1670 aa15.86■□□□□ 0.13
SNX1-214ENST00000625244 A0A0U1RQF3 1178 aa15.86■□□□□ 0.13
SNX1-214ENST00000625244 CCDC195A0A1B0GUA6 201 aa15.86■□□□□ 0.13
SNX1-214ENST00000625244 ANHXE9PGG2 379 aa15.86■□□□□ 0.13
SNX1-214ENST00000625244 HBP1O60381 514 aa15.86■□□□□ 0.13
SNX1-214ENST00000625244 SPEM2Q0P670 501 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms