RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 TMEM47Q9BQJ4 181 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 NACA2Q9H009 215 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 THEGQ9P2T0 379 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 EPS15L1Q9UBC2 864 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 STOML1Q9UBI4 398 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 TFR2Q9UP52 801 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 SLC4A7Q9Y6M7 1214 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 SYNGAP1Q96PV0 1343 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 MON2Q7Z3U7 1717 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 PVALEFA0A1B0GWK0 134 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 PHF20L1A8MW92 1017 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 TTC4O95801 387 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 PRDX5P30044 214 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 RAD23BP54727 409 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 SUSD4Q5VX71 490 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 CAPRIN2Q6IMN6 1127 aaKnown RBP6.04□□□□□ -1.44
ERCC6-213ENST00000624341 RFX8Q6ZV50 586 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 STAG2Q8N3U4 1231 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 OR2W6PQ8NHA6 318 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 TGS1Q96RS0 853 aaKnown RBP6.04□□□□□ -1.44
ERCC6-213ENST00000624341 PAGR1Q9BTK6 254 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 OSBPL1AQ9BXW6 950 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 MIS12Q9H081 205 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 SMYD3Q9H7B4 428 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 TMEM260Q9NX78 707 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 ZFP69BQ9UJL9 534 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 HPCAL4Q9UM19 191 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 ANKRD26Q9UPS8 1709 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 PNMA6FA0A0J9YX94 578 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 POTEB3A0JP26 581 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 POTECB2RU33 542 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 USP17L15C9J2P7 530 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 USP17L13C9JLJ4 530 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 USP17L11C9JVI0 530 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 USP17L18D6R9N7 530 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 USP17L22D6RA61 530 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 USP17L17D6RBQ6 530 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 USP17L19D6RCP7 530 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 USP17L20D6RJB6 530 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 hCG_1984214I3L0E3 225 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 IGBP1P78318 339 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 GPC5P78333 572 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 USP17L24Q0WX57 530 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 ANKRD20A4Q4UJ75 823 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 ANKRD20A8PQ5CZ79 823 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 ANKRD20A2Q5SQ80 823 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 ANKRD20A1Q5TYW2 823 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 USP17L6PQ6QN14 398 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 POTEBQ6S5H4 581 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 PDZD4Q76G19 769 aaPredicted RBP6.04□□□□□ -1.44
ERCC6-213ENST00000624341 SEPT12Q8IYM1 358 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 ST13P4Q8IZP2 240 aaPredicted RBP6.04□□□□□ -1.44
ERCC6-213ENST00000624341 PROM2Q8N271 834 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 ZNF713Q8N859 430 aaPredicted RBP6.04□□□□□ -1.44
ERCC6-213ENST00000624341 CEP70Q8NHQ1 597 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 TTC1Q99614 292 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 NCAPGQ9BPX3 1015 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 BRIP1Q9BX63 1249 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 EPN3Q9H201 632 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 ZWILCHQ9H900 591 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 VIPAS39Q9H9C1 493 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 TUBE1Q9UJT0 475 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 IVNS1ABPQ9Y6Y0 642 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 XDHP47989 1333 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 USP17L5A8MUK1 530 aa6.03□□□□□ -1.44
ERCC6-213ENST00000624341 GSG1L2A8MUP6 293 aa6.03□□□□□ -1.44
ERCC6-213ENST00000624341 AP5Z1O43299 807 aa6.03□□□□□ -1.44
ERCC6-213ENST00000624341 APOEP02649 317 aa6.03□□□□□ -1.44
ERCC6-213ENST00000624341 BMP3P12645 472 aa6.03□□□□□ -1.44
ERCC6-213ENST00000624341 ALDH1B1P30837 517 aa6.03□□□□□ -1.44
ERCC6-213ENST00000624341 CASP2P42575 452 aa6.03□□□□□ -1.44
ERCC6-213ENST00000624341 CDC37Q16543 378 aaPredicted RBP6.03□□□□□ -1.44
ERCC6-213ENST00000624341 ZNF394Q53GI3 561 aa6.03□□□□□ -1.44
ERCC6-213ENST00000624341 NBPF10Q6P3W6 841 aaKnown RBP6.03□□□□□ -1.44
ERCC6-213ENST00000624341 SGMS1Q86VZ5 419 aa6.03□□□□□ -1.44
ERCC6-213ENST00000624341 RAD54LQ92698 747 aa6.03□□□□□ -1.44
ERCC6-213ENST00000624341 RNF25Q96BH1 459 aaPredicted RBP6.03□□□□□ -1.44
ERCC6-213ENST00000624341 GPR101Q96P66 508 aaPredicted RBP6.03□□□□□ -1.44
ERCC6-213ENST00000624341 TRAIPQ9BWF2 469 aa6.03□□□□□ -1.44
ERCC6-213ENST00000624341 ADAM33Q9BZ11 813 aa6.03□□□□□ -1.44
ERCC6-213ENST00000624341 SH3GLB2Q9NR46 395 aa6.03□□□□□ -1.44
ERCC6-213ENST00000624341 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.03□□□□□ -1.44
ERCC6-213ENST00000624341 LEMD3Q9Y2U8 911 aa6.03□□□□□ -1.44
ERCC6-213ENST00000624341 NRKQ7Z2Y5 1582 aa6.03□□□□□ -1.44
ERCC6-213ENST00000624341 WDR19Q8NEZ3 1342 aa6.03□□□□□ -1.44
ERCC6-213ENST00000624341 LRP5O75197 1615 aa6.03□□□□□ -1.44
ERCC6-213ENST00000624341 PHRF1Q9P1Y6 1649 aaKnown RBP6.03□□□□□ -1.44
ERCC6-213ENST00000624341 IQANK1A0A1B0GTG1 560 aa6.03□□□□□ -1.44
ERCC6-213ENST00000624341 CLRN2A0PK11 232 aa6.03□□□□□ -1.44
ERCC6-213ENST00000624341 GRID2IPA4D2P6 1211 aa6.03□□□□□ -1.44
ERCC6-213ENST00000624341 INO80B-WBP1J3KQ70 363 aa6.03□□□□□ -1.44
ERCC6-213ENST00000624341 SPAG7O75391 227 aa6.03□□□□□ -1.44
ERCC6-213ENST00000624341 KITP10721 976 aa6.03□□□□□ -1.44
ERCC6-213ENST00000624341 EPHB1P54762 984 aa6.03□□□□□ -1.44
ERCC6-213ENST00000624341 PEX3P56589 373 aa6.03□□□□□ -1.44
ERCC6-213ENST00000624341 OSTNP61366 133 aa6.03□□□□□ -1.44
ERCC6-213ENST00000624341 ATP2C1P98194 919 aaPredicted RBP6.03□□□□□ -1.44
ERCC6-213ENST00000624341 ART3Q13508 389 aa6.03□□□□□ -1.44
ERCC6-213ENST00000624341 DRAP1Q14919 205 aaPredicted RBP6.03□□□□□ -1.44
ERCC6-213ENST00000624341 GUF1Q8N442 669 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms