RNA–Protein interactions for RNA: ENST00000623466.1

PCDHB17P-202, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 3,066 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-202ENST00000623466 TMOD1P28289 359 aa14.58□□□□□ -0.07
PCDHB17P-202ENST00000623466 MDH1P40925 334 aaKnown RBP14.58□□□□□ -0.07
PCDHB17P-202ENST00000623466 PPP1R2P41236 205 aa14.58□□□□□ -0.07
PCDHB17P-202ENST00000623466 ERVK-9P63128 1117 aa14.58□□□□□ -0.07
PCDHB17P-202ENST00000623466 NAB2Q15742 525 aa14.58□□□□□ -0.07
PCDHB17P-202ENST00000623466 SCFD1Q8WVM8 642 aa14.58□□□□□ -0.07
PCDHB17P-202ENST00000623466 RUBCNQ92622 972 aa14.58□□□□□ -0.07
PCDHB17P-202ENST00000623466 NUCKS1Q9H1E3 243 aaKnown RBP14.58□□□□□ -0.07
PCDHB17P-202ENST00000623466 A0A1B0GUA9 196 aa14.58□□□□□ -0.08
PCDHB17P-202ENST00000623466 SSU72P8A0A1W2PR75 194 aa14.58□□□□□ -0.08
PCDHB17P-202ENST00000623466 SERPING1P05155 500 aa14.58□□□□□ -0.08
PCDHB17P-202ENST00000623466 ACTN1P12814 892 aa14.58□□□□□ -0.08
PCDHB17P-202ENST00000623466 RSBN1LQ6PCB5 846 aaPredicted RBP14.58□□□□□ -0.08
PCDHB17P-202ENST00000623466 TSG101Q99816 390 aa14.58□□□□□ -0.08
PCDHB17P-202ENST00000623466 EMILIN3Q9NT22 766 aa14.58□□□□□ -0.08
PCDHB17P-202ENST00000623466 COL4A3BPQ9Y5P4 624 aa14.58□□□□□ -0.08
PCDHB17P-202ENST00000623466 ASTN2O75129 1339 aaPredicted RBP14.58□□□□□ -0.08
PCDHB17P-202ENST00000623466 FGFR1OPO95684 399 aaKnown RBP14.57□□□□□ -0.08
PCDHB17P-202ENST00000623466 MYBP10242 640 aa14.57□□□□□ -0.08
PCDHB17P-202ENST00000623466 STAT2P52630 851 aa14.57□□□□□ -0.08
PCDHB17P-202ENST00000623466 LRRC63Q05C16 580 aa14.57□□□□□ -0.08
PCDHB17P-202ENST00000623466 KLHL30Q0D2K2 578 aa14.57□□□□□ -0.08
PCDHB17P-202ENST00000623466 MEI1Q5TIA1 1274 aa14.57□□□□□ -0.08
PCDHB17P-202ENST00000623466 SFR1Q86XK3 245 aa14.57□□□□□ -0.08
PCDHB17P-202ENST00000623466 ETNPPLQ8TBG4 499 aa14.57□□□□□ -0.08
PCDHB17P-202ENST00000623466 IQCDQ96DY2 449 aa14.57□□□□□ -0.08
PCDHB17P-202ENST00000623466 AGBL1Q96MI9 1066 aa14.57□□□□□ -0.08
PCDHB17P-202ENST00000623466 SH3GL3Q99963 347 aa14.57□□□□□ -0.08
PCDHB17P-202ENST00000623466 CEP104O60308 925 aa14.57□□□□□ -0.08
PCDHB17P-202ENST00000623466 ATP2C2O75185 946 aa14.57□□□□□ -0.08
PCDHB17P-202ENST00000623466 ITGB3BPQ13352 177 aaPredicted RBP14.57□□□□□ -0.08
PCDHB17P-202ENST00000623466 PPP1R18Q6NYC8 613 aa14.57□□□□□ -0.08
PCDHB17P-202ENST00000623466 REEP2Q9BRK0 252 aa14.57□□□□□ -0.08
PCDHB17P-202ENST00000623466 RUSC1Q9BVN2 902 aa14.57□□□□□ -0.08
PCDHB17P-202ENST00000623466 NEUROG2Q9H2A3 272 aa14.57□□□□□ -0.08
PCDHB17P-202ENST00000623466 CEP72Q9P209 647 aa14.57□□□□□ -0.08
PCDHB17P-202ENST00000623466 QSER1Q2KHR3 1735 aa14.57□□□□□ -0.08
PCDHB17P-202ENST00000623466 MYO3BQ8WXR4 1341 aa14.57□□□□□ -0.08
PCDHB17P-202ENST00000623466 ANKRD33BA6NCL7 494 aa14.57□□□□□ -0.08
PCDHB17P-202ENST00000623466 FLT3P36888 993 aa14.57□□□□□ -0.08
PCDHB17P-202ENST00000623466 USP11P51784 963 aa14.57□□□□□ -0.08
PCDHB17P-202ENST00000623466 SPIRE1Q08AE8 756 aa14.57□□□□□ -0.08
PCDHB17P-202ENST00000623466 GRIK3Q13003 919 aa14.57□□□□□ -0.08
PCDHB17P-202ENST00000623466 ADAM9Q13443 819 aa14.57□□□□□ -0.08
PCDHB17P-202ENST00000623466 SLC18A3Q16572 532 aa14.57□□□□□ -0.08
PCDHB17P-202ENST00000623466 ILDR2Q71H61 639 aa14.57□□□□□ -0.08
PCDHB17P-202ENST00000623466 USP38Q8NB14 1042 aa14.57□□□□□ -0.08
PCDHB17P-202ENST00000623466 PARD3BQ8TEW8 1205 aa14.57□□□□□ -0.08
PCDHB17P-202ENST00000623466 DDX47Q9H0S4 455 aaKnown RBP14.57□□□□□ -0.08
PCDHB17P-202ENST00000623466 ZBTB21Q9ULJ3 1066 aa14.57□□□□□ -0.08
PCDHB17P-202ENST00000623466 RPSAP08865 295 aaKnown RBP14.56□□□□□ -0.08
PCDHB17P-202ENST00000623466 HSD17B3P37058 310 aa14.56□□□□□ -0.08
PCDHB17P-202ENST00000623466 FKBP3Q00688 224 aaKnown RBP14.56□□□□□ -0.08
PCDHB17P-202ENST00000623466 PSMD2Q13200 908 aa14.56□□□□□ -0.08
PCDHB17P-202ENST00000623466 SNX1Q13596 522 aa14.56□□□□□ -0.08
PCDHB17P-202ENST00000623466 CCDC26Q8TAB7 109 aa14.56□□□□□ -0.08
PCDHB17P-202ENST00000623466 WDR18Q9BV38 432 aa14.56□□□□□ -0.08
PCDHB17P-202ENST00000623466 LRRC4CQ9HCJ2 640 aa14.56□□□□□ -0.08
PCDHB17P-202ENST00000623466 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.56□□□□□ -0.08
PCDHB17P-202ENST00000623466 UAP1Q16222 522 aaPredicted RBP14.56□□□□□ -0.08
PCDHB17P-202ENST00000623466 SPRED3Q2MJR0 410 aa14.56□□□□□ -0.08
PCDHB17P-202ENST00000623466 ZC2HC1CQ53FD0 456 aaPredicted RBP14.56□□□□□ -0.08
PCDHB17P-202ENST00000623466 ODF2Q5BJF6 829 aa14.56□□□□□ -0.08
PCDHB17P-202ENST00000623466 CCDC65Q8IXS2 484 aa14.56□□□□□ -0.08
PCDHB17P-202ENST00000623466 TAF4BQ92750 862 aa14.56□□□□□ -0.08
PCDHB17P-202ENST00000623466 ZBTB10Q96DT7 871 aa14.56□□□□□ -0.08
PCDHB17P-202ENST00000623466 TSKSQ9UJT2 592 aa14.56□□□□□ -0.08
PCDHB17P-202ENST00000623466 DNM3Q9UQ16 869 aa14.56□□□□□ -0.08
PCDHB17P-202ENST00000623466 DCDC2CA8MYV0 355 aa14.55□□□□□ -0.08
PCDHB17P-202ENST00000623466 RBAK-RBAKDNI3L0D1 243 aa14.55□□□□□ -0.08
PCDHB17P-202ENST00000623466 RTN2O75298 545 aa14.55□□□□□ -0.08
PCDHB17P-202ENST00000623466 ARP10275 920 aa14.55□□□□□ -0.08
PCDHB17P-202ENST00000623466 SLC12A3P55017 1021 aa14.55□□□□□ -0.08
PCDHB17P-202ENST00000623466 COBLL1Q53SF7 1204 aa14.55□□□□□ -0.08
PCDHB17P-202ENST00000623466 TCERG1LQ5VWI1 586 aa14.55□□□□□ -0.08
PCDHB17P-202ENST00000623466 GOLGA6L10A6NI86 522 aa14.55□□□□□ -0.08
PCDHB17P-202ENST00000623466 ENTPD3O75355 529 aa14.55□□□□□ -0.08
PCDHB17P-202ENST00000623466 KCNA3P22001 575 aa14.55□□□□□ -0.08
PCDHB17P-202ENST00000623466 CASP4P49662 377 aa14.55□□□□□ -0.08
PCDHB17P-202ENST00000623466 PTK2Q05397 1052 aa14.55□□□□□ -0.08
PCDHB17P-202ENST00000623466 CXCL9Q07325 125 aa14.55□□□□□ -0.08
PCDHB17P-202ENST00000623466 GIT2Q14161 759 aa14.55□□□□□ -0.08
PCDHB17P-202ENST00000623466 RPS6KA1Q15418 735 aa14.55□□□□□ -0.08
PCDHB17P-202ENST00000623466 QPCTQ16769 361 aa14.55□□□□□ -0.08
PCDHB17P-202ENST00000623466 CHADLQ6NUI6 762 aa14.55□□□□□ -0.08
PCDHB17P-202ENST00000623466 UBLCP1Q8WVY7 318 aaPredicted RBP14.55□□□□□ -0.08
PCDHB17P-202ENST00000623466 EIF2AK1Q9BQI3 630 aaKnown RBP14.55□□□□□ -0.08
PCDHB17P-202ENST00000623466 MRIQ9BWK5 157 aa14.55□□□□□ -0.08
PCDHB17P-202ENST00000623466 TAF1DQ9H5J8 278 aaPredicted RBP14.55□□□□□ -0.08
PCDHB17P-202ENST00000623466 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.55□□□□□ -0.08
PCDHB17P-202ENST00000623466 KLC4Q9NSK0 619 aa14.55□□□□□ -0.08
PCDHB17P-202ENST00000623466 PCDHGC5Q9Y5F6 944 aa14.55□□□□□ -0.08
PCDHB17P-202ENST00000623466 TMCO5BA8MYB1 307 aa14.55□□□□□ -0.08
PCDHB17P-202ENST00000623466 CLSTN1O94985 981 aa14.55□□□□□ -0.08
PCDHB17P-202ENST00000623466 ITGA4P13612 1032 aa14.55□□□□□ -0.08
PCDHB17P-202ENST00000623466 ECHS1P30084 290 aa14.55□□□□□ -0.08
PCDHB17P-202ENST00000623466 CTNNA1P35221 906 aaKnown RBP14.55□□□□□ -0.08
PCDHB17P-202ENST00000623466 EPS15P42566 896 aa14.55□□□□□ -0.08
PCDHB17P-202ENST00000623466 E2F5Q15329 346 aa14.55□□□□□ -0.08
PCDHB17P-202ENST00000623466 WHAMMQ8TF30 809 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms