RNA–Protein interactions for RNA: ENST00000622776.1

CPSF1-214, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-214ENST00000622776 LRRC55Q6ZSA7 311 aa26.87■■□□□ 1.89
CPSF1-214ENST00000622776 TRIM67Q6ZTA4 783 aa26.87■■□□□ 1.89
CPSF1-214ENST00000622776 FBXL16Q8N461 479 aa26.87■■□□□ 1.89
CPSF1-214ENST00000622776 CCDC148Q8NFR7 591 aa26.87■■□□□ 1.89
CPSF1-214ENST00000622776 SUSD6Q92537 303 aa26.87■■□□□ 1.89
CPSF1-214ENST00000622776 RNF26Q9BY78 433 aaPredicted RBP26.87■■□□□ 1.89
CPSF1-214ENST00000622776 MSH4O15457 936 aa26.86■■□□□ 1.89
CPSF1-214ENST00000622776 ATF7P17544 494 aaPredicted RBP26.86■■□□□ 1.89
CPSF1-214ENST00000622776 HSPA4P34932 840 aa26.86■■□□□ 1.89
CPSF1-214ENST00000622776 PRKCEQ02156 737 aa26.86■■□□□ 1.89
CPSF1-214ENST00000622776 PLPP4Q5VZY2 271 aa26.86■■□□□ 1.89
CPSF1-214ENST00000622776 KCNT2Q6UVM3 1135 aa26.86■■□□□ 1.89
CPSF1-214ENST00000622776 BMP8AQ7Z5Y6 402 aa26.86■■□□□ 1.89
CPSF1-214ENST00000622776 ECHDC2Q86YB7 292 aa26.86■■□□□ 1.89
CPSF1-214ENST00000622776 CCDC136Q96JN2 1154 aa26.86■■□□□ 1.89
CPSF1-214ENST00000622776 ZNF668Q96K58 619 aaPredicted RBP26.86■■□□□ 1.89
CPSF1-214ENST00000622776 RPGRIP1Q96KN7 1286 aa26.86■■□□□ 1.89
CPSF1-214ENST00000622776 AGXT2Q9BYV1 514 aa26.86■■□□□ 1.89
CPSF1-214ENST00000622776 CACNA1HO95180 2353 aa26.86■■□□□ 1.89
CPSF1-214ENST00000622776 RPS6KB1P23443 525 aa26.85■■□□□ 1.89
CPSF1-214ENST00000622776 TMEM184AQ6ZMB5 413 aa26.85■■□□□ 1.89
CPSF1-214ENST00000622776 ABI1Q8IZP0 508 aa26.85■■□□□ 1.89
CPSF1-214ENST00000622776 LRRC43Q8N309 656 aa26.85■■□□□ 1.89
CPSF1-214ENST00000622776 ZNF558Q96NG5 402 aa26.85■■□□□ 1.89
CPSF1-214ENST00000622776 RIT2Q99578 217 aa26.85■■□□□ 1.89
CPSF1-214ENST00000622776 TCF25Q9BQ70 676 aa26.85■■□□□ 1.89
CPSF1-214ENST00000622776 SLC26A6Q9BXS9 759 aa26.85■■□□□ 1.89
CPSF1-214ENST00000622776 VPS54Q9P1Q0 977 aa26.85■■□□□ 1.89
CPSF1-214ENST00000622776 TMEM221A6NGB7 291 aa26.84■■□□□ 1.89
CPSF1-214ENST00000622776 M0R296 226 aa26.84■■□□□ 1.89
CPSF1-214ENST00000622776 GAS7O60861 476 aa26.84■■□□□ 1.89
CPSF1-214ENST00000622776 SRGAP2BP0DMP2 458 aa26.84■■□□□ 1.89
CPSF1-214ENST00000622776 IFNAR1P17181 557 aa26.84■■□□□ 1.89
CPSF1-214ENST00000622776 MRE11P49959 708 aa26.84■■□□□ 1.89
CPSF1-214ENST00000622776 GPC3P51654 580 aa26.84■■□□□ 1.89
CPSF1-214ENST00000622776 USP11P51784 963 aa26.84■■□□□ 1.89
CPSF1-214ENST00000622776 ZXDAP98168 799 aa26.84■■□□□ 1.89
CPSF1-214ENST00000622776 KCNC3Q14003 757 aa26.84■■□□□ 1.89
CPSF1-214ENST00000622776 UGCGQ16739 394 aa26.84■■□□□ 1.89
CPSF1-214ENST00000622776 SLC5A5Q92911 643 aa26.84■■□□□ 1.89
CPSF1-214ENST00000622776 NGRNQ9NPE2 291 aaKnown RBP26.84■■□□□ 1.89
CPSF1-214ENST00000622776 ENTPD7Q9NQZ7 604 aa26.84■■□□□ 1.89
CPSF1-214ENST00000622776 DARSP14868 501 aaKnown RBP26.83■■□□□ 1.89
CPSF1-214ENST00000622776 PPM1AP35813 382 aa26.83■■□□□ 1.89
CPSF1-214ENST00000622776 PBX3P40426 434 aa26.83■■□□□ 1.89
CPSF1-214ENST00000622776 JAK3P52333 1124 aa26.83■■□□□ 1.89
CPSF1-214ENST00000622776 LRCH2Q5VUJ6 765 aa26.83■■□□□ 1.89
CPSF1-214ENST00000622776 RNF169Q8NCN4 708 aa26.83■■□□□ 1.89
CPSF1-214ENST00000622776 PBXIP1Q96AQ6 731 aa26.83■■□□□ 1.89
CPSF1-214ENST00000622776 SCLT1Q96NL6 688 aa26.83■■□□□ 1.89
CPSF1-214ENST00000622776 TEKT3Q9BXF9 490 aa26.83■■□□□ 1.89
CPSF1-214ENST00000622776 S1PR5Q9H228 398 aa26.83■■□□□ 1.89
CPSF1-214ENST00000622776 UNC45AQ9H3U1 944 aa26.83■■□□□ 1.89
CPSF1-214ENST00000622776 HIDE1A8MVS5 230 aa26.82■■□□□ 1.88
CPSF1-214ENST00000622776 CHMP2AO43633 222 aa26.82■■□□□ 1.88
CPSF1-214ENST00000622776 SFNP31947 248 aa26.82■■□□□ 1.88
CPSF1-214ENST00000622776 TECP42680 631 aa26.82■■□□□ 1.88
CPSF1-214ENST00000622776 KRT17Q04695 432 aa26.82■■□□□ 1.88
CPSF1-214ENST00000622776 TBC1D8BQ0IIM8 1120 aa26.82■■□□□ 1.88
CPSF1-214ENST00000622776 CLLU1OSQ5K130 101 aa26.82■■□□□ 1.88
CPSF1-214ENST00000622776 ANKRD54Q6NXT1 300 aa26.82■■□□□ 1.88
CPSF1-214ENST00000622776 SPG21Q9NZD8 308 aa26.82■■□□□ 1.88
CPSF1-214ENST00000622776 A0A0U1RQF3 1178 aa26.81■■□□□ 1.88
CPSF1-214ENST00000622776 FGFR4P22455 802 aa26.81■■□□□ 1.88
CPSF1-214ENST00000622776 PDIA3P30101 505 aaKnown RBP26.81■■□□□ 1.88
CPSF1-214ENST00000622776 CCT2P78371 535 aaKnown RBP26.81■■□□□ 1.88
CPSF1-214ENST00000622776 TARBP2Q15633 366 aaKnown RBP26.81■■□□□ 1.88
CPSF1-214ENST00000622776 SYCE2Q6PIF2 218 aa26.81■■□□□ 1.88
CPSF1-214ENST00000622776 TMC7Q7Z402 723 aa26.81■■□□□ 1.88
CPSF1-214ENST00000622776 GJA10Q969M2 543 aa26.81■■□□□ 1.88
CPSF1-214ENST00000622776 NCOA5Q9HCD5 579 aaKnown RBP26.81■■□□□ 1.88
CPSF1-214ENST00000622776 SH3GLB2Q9NR46 395 aa26.81■■□□□ 1.88
CPSF1-214ENST00000622776 EOMESO95936 686 aa26.8■■□□□ 1.88
CPSF1-214ENST00000622776 PSMA5P28066 241 aa26.8■■□□□ 1.88
CPSF1-214ENST00000622776 EVCP57679 992 aa26.8■■□□□ 1.88
CPSF1-214ENST00000622776 NLRP5P59047 1200 aa26.8■■□□□ 1.88
CPSF1-214ENST00000622776 LLGL2Q6P1M3 1020 aa26.8■■□□□ 1.88
CPSF1-214ENST00000622776 ZNF598Q86UK7 904 aaKnown RBP26.8■■□□□ 1.88
CPSF1-214ENST00000622776 NLRP7Q8WX94 980 aa26.8■■□□□ 1.88
CPSF1-214ENST00000622776 PSMD10O75832 226 aa26.79■■□□□ 1.88
CPSF1-214ENST00000622776 MIER3Q7Z3K6 550 aa26.79■■□□□ 1.88
CPSF1-214ENST00000622776 SLC39A11Q8N1S5 342 aa26.79■■□□□ 1.88
CPSF1-214ENST00000622776 RDM1Q8NG50 284 aa26.79■■□□□ 1.88
CPSF1-214ENST00000622776 TBCKQ8TEA7 893 aa26.79■■□□□ 1.88
CPSF1-214ENST00000622776 APOL5Q9BWW9 433 aa26.79■■□□□ 1.88
CPSF1-214ENST00000622776 DACT1Q9NYF0 836 aa26.79■■□□□ 1.88
CPSF1-214ENST00000622776 CSDE1O75534 798 aaKnown RBP26.78■■□□□ 1.88
CPSF1-214ENST00000622776 HOXB8P17481 243 aaPredicted RBP26.78■■□□□ 1.88
CPSF1-214ENST00000622776 DRP2Q13474 957 aa26.78■■□□□ 1.88
CPSF1-214ENST00000622776 Q4G0T1 1027 aa26.78■■□□□ 1.88
CPSF1-214ENST00000622776 HELQQ8TDG4 1101 aa26.78■■□□□ 1.88
CPSF1-214ENST00000622776 NIFKQ9BYG3 293 aaKnown RBP26.78■■□□□ 1.88
CPSF1-214ENST00000622776 C22orf23Q9BZE7 217 aa26.78■■□□□ 1.88
CPSF1-214ENST00000622776 CDC42EP1Q00587 391 aa26.77■■□□□ 1.88
CPSF1-214ENST00000622776 SIGLEC14Q08ET2 396 aa26.77■■□□□ 1.88
CPSF1-214ENST00000622776 MTERF2Q49AM1 385 aa26.77■■□□□ 1.88
CPSF1-214ENST00000622776 XKR3Q5GH77 459 aa26.77■■□□□ 1.88
CPSF1-214ENST00000622776 SUGP1Q8IWZ8 645 aaKnown RBP26.77■■□□□ 1.88
CPSF1-214ENST00000622776 MRPL43Q8N983 215 aaKnown RBP26.77■■□□□ 1.88
CPSF1-214ENST00000622776 GCOM2Q9BZD3 368 aaPredicted RBP26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms