RNA–Protein interactions for RNA: ENST00000622362.1

FAM200B-223, Transcript of family with sequence similarity 200 member B, human

APPRIS P1 TSL 1 (best) BASIC

Gene FAM200B, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM200B-223	ENST00000622362	STAG2	Q8N3U4	1231 aa		12.53	□□□□□ -0.4
FAM200B-223	ENST00000622362	ALG13	Q9NP73	1137 aa	Known RBP	12.53	□□□□□ -0.4
FAM200B-223	ENST00000622362	MRC1	P22897	1456 aa		12.53	□□□□□ -0.4
FAM200B-223	ENST00000622362	FOS	P01100	380 aa	Predicted RBP	12.53	□□□□□ -0.4
FAM200B-223	ENST00000622362	SERPINB4	P48594	390 aa		12.53	□□□□□ -0.4
FAM200B-223	ENST00000622362	NYAP1	Q6ZVC0	841 aa		12.53	□□□□□ -0.4
FAM200B-223	ENST00000622362	ZNF579	Q8NAF0	562 aa	Known RBP	12.53	□□□□□ -0.4
FAM200B-223	ENST00000622362	OXER1	Q8TDS5	423 aa		12.53	□□□□□ -0.4
FAM200B-223	ENST00000622362	POLR3C	Q9BUI4	534 aa	Predicted RBP	12.53	□□□□□ -0.4
FAM200B-223	ENST00000622362	TRPV6	Q9H1D0	765 aa		12.53	□□□□□ -0.4
FAM200B-223	ENST00000622362	KANSL2	Q9H9L4	492 aa		12.53	□□□□□ -0.4
FAM200B-223	ENST00000622362	ZNF277	Q9NRM2	450 aa	Predicted RBP	12.53	□□□□□ -0.4
FAM200B-223	ENST00000622362	NOC2L	Q9Y3T9	749 aa	Known RBP	12.53	□□□□□ -0.4
FAM200B-223	ENST00000622362	SFI1	A8K8P3	1242 aa		12.53	□□□□□ -0.4
FAM200B-223	ENST00000622362	HSPA8	P11142	646 aa	Known RBP	12.53	□□□□□ -0.4
FAM200B-223	ENST00000622362	GAP43	P17677	238 aa		12.53	□□□□□ -0.4
FAM200B-223	ENST00000622362	SLC16A2	P36021	539 aa		12.53	□□□□□ -0.4
FAM200B-223	ENST00000622362	PGM1	P36871	562 aa		12.53	□□□□□ -0.4
FAM200B-223	ENST00000622362	DAB2	P98082	770 aa		12.53	□□□□□ -0.4
FAM200B-223	ENST00000622362	KCNH2	Q12809	1159 aa		12.53	□□□□□ -0.4
FAM200B-223	ENST00000622362	FOXD4	Q12950	439 aa	Predicted RBP	12.53	□□□□□ -0.4
FAM200B-223	ENST00000622362	NR1H3	Q13133	447 aa		12.53	□□□□□ -0.4
FAM200B-223	ENST00000622362	TBC1D22A	Q8WUA7	517 aa		12.53	□□□□□ -0.4
FAM200B-223	ENST00000622362	JDP2	Q8WYK2	163 aa		12.53	□□□□□ -0.4
FAM200B-223	ENST00000622362	ZBTB10	Q96DT7	871 aa		12.53	□□□□□ -0.4
FAM200B-223	ENST00000622362	PRMT1	Q99873	361 aa	Known RBP	12.53	□□□□□ -0.4
FAM200B-223	ENST00000622362	EIF2A	Q9BY44	585 aa	Known RBP	12.53	□□□□□ -0.4
FAM200B-223	ENST00000622362	FUT8	Q9BYC5	575 aa		12.53	□□□□□ -0.4
FAM200B-223	ENST00000622362	ANO3	Q9BYT9	981 aa		12.53	□□□□□ -0.4
FAM200B-223	ENST00000622362	CCDC90B	Q9GZT6	254 aa		12.53	□□□□□ -0.4
FAM200B-223	ENST00000622362	SMARCAL1	Q9NZC9	954 aa		12.53	□□□□□ -0.4
FAM200B-223	ENST00000622362	EHD2	Q9NZN4	543 aa		12.53	□□□□□ -0.4
FAM200B-223	ENST00000622362	PNMA2	Q9UL42	364 aa		12.53	□□□□□ -0.4
FAM200B-223	ENST00000622362	MST1R	Q04912	1400 aa		12.52	□□□□□ -0.4
FAM200B-223	ENST00000622362	KCNA3	P22001	575 aa		12.52	□□□□□ -0.4
FAM200B-223	ENST00000622362	KCTD6	Q8NC69	237 aa		12.52	□□□□□ -0.4
FAM200B-223	ENST00000622362	THAP11	Q96EK4	314 aa		12.52	□□□□□ -0.4
FAM200B-223	ENST00000622362	CEP19	Q96LK0	163 aa		12.52	□□□□□ -0.4
FAM200B-223	ENST00000622362	AMN	Q9BXJ7	453 aa		12.52	□□□□□ -0.4
FAM200B-223	ENST00000622362	NXF1	Q9UBU9	619 aa	Known RBP	12.52	□□□□□ -0.4
FAM200B-223	ENST00000622362	CNOT8	Q9UFF9	292 aa	Known RBP	12.52	□□□□□ -0.4
FAM200B-223	ENST00000622362	TRAF3IP3	Q9Y228	551 aa		12.52	□□□□□ -0.4
FAM200B-223	ENST00000622362	ZBED4	O75132	1171 aa		12.52	□□□□□ -0.41
FAM200B-223	ENST00000622362	FGFR4	P22455	802 aa		12.52	□□□□□ -0.41
FAM200B-223	ENST00000622362	STAT2	P52630	851 aa		12.52	□□□□□ -0.41
FAM200B-223	ENST00000622362	CHRND	Q07001	517 aa		12.52	□□□□□ -0.41
FAM200B-223	ENST00000622362	TMC4	Q7Z404	712 aa		12.52	□□□□□ -0.41
FAM200B-223	ENST00000622362	ZBTB8OS	Q8IWT0	167 aa		12.52	□□□□□ -0.41
FAM200B-223	ENST00000622362	CNPY4	Q8N129	248 aa		12.52	□□□□□ -0.41
FAM200B-223	ENST00000622362	RAPGEF5	Q92565	580 aa		12.52	□□□□□ -0.41
FAM200B-223	ENST00000622362	PARVG	Q9HBI0	331 aa		12.52	□□□□□ -0.41
FAM200B-223	ENST00000622362	ZBED1	O96006	694 aa		12.52	□□□□□ -0.41
FAM200B-223	ENST00000622362	CD58	P19256	250 aa		12.52	□□□□□ -0.41
FAM200B-223	ENST00000622362	ARL4C	P56559	192 aa		12.52	□□□□□ -0.41
FAM200B-223	ENST00000622362	KDSR	Q06136	332 aa		12.52	□□□□□ -0.41
FAM200B-223	ENST00000622362	MED21	Q13503	144 aa		12.52	□□□□□ -0.41
FAM200B-223	ENST00000622362	CCDC92	Q53HC0	331 aa	Predicted RBP	12.52	□□□□□ -0.41
FAM200B-223	ENST00000622362	C4orf50	Q6ZRC1	276 aa		12.52	□□□□□ -0.41
FAM200B-223	ENST00000622362	TRPM8	Q7Z2W7	1104 aa		12.52	□□□□□ -0.41
FAM200B-223	ENST00000622362	METTL16	Q86W50	562 aa	Known RBP	12.52	□□□□□ -0.41
FAM200B-223	ENST00000622362	PPM1N	Q8N819	430 aa		12.52	□□□□□ -0.41
FAM200B-223	ENST00000622362	TC2N	Q8N9U0	490 aa		12.52	□□□□□ -0.41
FAM200B-223	ENST00000622362	HIC2	Q96JB3	615 aa		12.52	□□□□□ -0.41
FAM200B-223	ENST00000622362	FHOD1	Q9Y613	1164 aa		12.52	□□□□□ -0.41
FAM200B-223	ENST00000622362	FAM107A	O95990	144 aa		12.51	□□□□□ -0.41
FAM200B-223	ENST00000622362	CHN1	P15882	459 aa		12.51	□□□□□ -0.41
FAM200B-223	ENST00000622362	CARS	P49589	748 aa	Known RBP	12.51	□□□□□ -0.41
FAM200B-223	ENST00000622362	ICA1	Q05084	483 aa		12.51	□□□□□ -0.41
FAM200B-223	ENST00000622362	IFRD2	Q12894	506 aa	Predicted RBP	12.51	□□□□□ -0.41
FAM200B-223	ENST00000622362	ZNF746	Q6NUN9	644 aa	Predicted RBP	12.51	□□□□□ -0.41
FAM200B-223	ENST00000622362	CCDC137	Q6PK04	289 aa	Known RBP	12.51	□□□□□ -0.41
FAM200B-223	ENST00000622362	PRPF38A	Q8NAV1	312 aa	Known RBP	12.51	□□□□□ -0.41
FAM200B-223	ENST00000622362	RNF169	Q8NCN4	708 aa		12.51	□□□□□ -0.41
FAM200B-223	ENST00000622362	ZIM3	Q96PE6	472 aa		12.51	□□□□□ -0.41
FAM200B-223	ENST00000622362	SPC25	Q9HBM1	224 aa		12.51	□□□□□ -0.41
FAM200B-223	ENST00000622362	USP15	Q9Y4E8	981 aa	Predicted RBP	12.51	□□□□□ -0.41
FAM200B-223	ENST00000622362	GOLGA8IP	A6NC78	632 aa		12.51	□□□□□ -0.41
FAM200B-223	ENST00000622362	GOLGA8J	A6NMD2	632 aa		12.51	□□□□□ -0.41
FAM200B-223	ENST00000622362	KRT38	O76015	456 aa		12.51	□□□□□ -0.41
FAM200B-223	ENST00000622362	TRAPPC3L	Q5T215	181 aa		12.51	□□□□□ -0.41
FAM200B-223	ENST00000622362	RNF207	Q6ZRF8	634 aa		12.51	□□□□□ -0.41
FAM200B-223	ENST00000622362	UNC13D	Q70J99	1090 aa		12.51	□□□□□ -0.41
FAM200B-223	ENST00000622362	SPICE1	Q8N0Z3	855 aa		12.51	□□□□□ -0.41
FAM200B-223	ENST00000622362	RNF25	Q96BH1	459 aa	Predicted RBP	12.51	□□□□□ -0.41
FAM200B-223	ENST00000622362	GRAMD1A	Q96CP6	724 aa		12.51	□□□□□ -0.41
FAM200B-223	ENST00000622362	ERP27	Q96DN0	273 aa		12.51	□□□□□ -0.41
FAM200B-223	ENST00000622362	SLITRK6	Q9H5Y7	841 aa		12.51	□□□□□ -0.41
FAM200B-223	ENST00000622362	PALMD	Q9NP74	551 aa		12.51	□□□□□ -0.41
FAM200B-223	ENST00000622362	CCDC87	Q9NVE4	849 aa		12.51	□□□□□ -0.41
FAM200B-223	ENST00000622362	SYCE1L	A8MT33	242 aa		12.51	□□□□□ -0.41
FAM200B-223	ENST00000622362	SERPINB3	P29508	390 aa		12.51	□□□□□ -0.41
FAM200B-223	ENST00000622362	CNGA1	P29973	690 aa		12.51	□□□□□ -0.41
FAM200B-223	ENST00000622362	POLG	P54098	1239 aa	Predicted RBP	12.51	□□□□□ -0.41
FAM200B-223	ENST00000622362	PMS1	P54277	932 aa	Known RBP	12.51	□□□□□ -0.41
FAM200B-223	ENST00000622362	FMR1	Q06787	632 aa	Known RBP eCLIP	12.51	□□□□□ -0.41
FAM200B-223	ENST00000622362	DEPDC1B	Q8WUY9	529 aa		12.51	□□□□□ -0.41
FAM200B-223	ENST00000622362	DNAJC9	Q8WXX5	260 aa		12.51	□□□□□ -0.41
FAM200B-223	ENST00000622362	XPO6	Q96QU8	1125 aa	Known RBP	12.51	□□□□□ -0.41
FAM200B-223	ENST00000622362	CCDC195	A0A1B0GUA6	201 aa		12.51	□□□□□ -0.41
FAM200B-223	ENST00000622362	CHRNA3	P32297	505 aa		12.51	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms