RNA–Protein interactions for RNA: ENST00000622134.4

COL25A1-209, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 4,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-209ENST00000622134 PACS2Q86VP3 889 aa11.23□□□□□ -0.61
COL25A1-209ENST00000622134 ZNF473Q8WTR7 871 aaKnown RBP11.23□□□□□ -0.61
COL25A1-209ENST00000622134 VCPKMTQ9H867 229 aa11.23□□□□□ -0.61
COL25A1-209ENST00000622134 ADGRG1Q9Y653 693 aa11.23□□□□□ -0.61
COL25A1-209ENST00000622134 SCINQ9Y6U3 715 aa11.23□□□□□ -0.61
COL25A1-209ENST00000622134 MAGEB2O15479 319 aa11.23□□□□□ -0.61
COL25A1-209ENST00000622134 ZFXP17010 805 aaPredicted RBP11.23□□□□□ -0.61
COL25A1-209ENST00000622134 FOXO4P98177 505 aa11.23□□□□□ -0.61
COL25A1-209ENST00000622134 C6orf118Q5T5N4 469 aa11.23□□□□□ -0.61
COL25A1-209ENST00000622134 PPP4R3CPQ6ZMV5 832 aa11.23□□□□□ -0.61
COL25A1-209ENST00000622134 DHX40Q8IX18 779 aaKnown RBP11.23□□□□□ -0.61
COL25A1-209ENST00000622134 NDUFAF2Q8N183 169 aa11.23□□□□□ -0.61
COL25A1-209ENST00000622134 PDCD7Q8N8D1 485 aaKnown RBP11.23□□□□□ -0.61
COL25A1-209ENST00000622134 RNF139Q8WU17 664 aa11.23□□□□□ -0.61
COL25A1-209ENST00000622134 PIDD1Q9HB75 910 aa11.23□□□□□ -0.61
COL25A1-209ENST00000622134 BZW2Q9Y6E2 419 aaKnown RBP11.23□□□□□ -0.61
COL25A1-209ENST00000622134 STK36Q9NRP7 1315 aa11.23□□□□□ -0.61
COL25A1-209ENST00000622134 PPP2R2AP63151 447 aa11.23□□□□□ -0.61
COL25A1-209ENST00000622134 KRT81Q14533 505 aa11.23□□□□□ -0.61
COL25A1-209ENST00000622134 EPHA10Q5JZY3 1008 aa11.23□□□□□ -0.61
COL25A1-209ENST00000622134 REM2Q8IYK8 340 aaPredicted RBP11.23□□□□□ -0.61
COL25A1-209ENST00000622134 GPC2Q8N158 579 aa11.23□□□□□ -0.61
COL25A1-209ENST00000622134 BEST2Q8NFU1 509 aa11.23□□□□□ -0.61
COL25A1-209ENST00000622134 PIK3R5Q8WYR1 880 aa11.23□□□□□ -0.61
COL25A1-209ENST00000622134 CCDC127Q96BQ5 260 aa11.23□□□□□ -0.61
COL25A1-209ENST00000622134 DHTKD1Q96HY7 919 aaPredicted RBP11.23□□□□□ -0.61
COL25A1-209ENST00000622134 SPATA33Q96N06 139 aa11.23□□□□□ -0.61
COL25A1-209ENST00000622134 DPH5Q9H2P9 285 aa11.23□□□□□ -0.61
COL25A1-209ENST00000622134 SLC40A1Q9NP59 571 aa11.23□□□□□ -0.61
COL25A1-209ENST00000622134 FAM207AQ9NSI2 230 aaPredicted RBP11.23□□□□□ -0.61
COL25A1-209ENST00000622134 PLAAQ9Y263 795 aa11.23□□□□□ -0.61
COL25A1-209ENST00000622134 MAFGO15525 162 aa11.22□□□□□ -0.61
COL25A1-209ENST00000622134 MTMR2Q13614 643 aa11.22□□□□□ -0.61
COL25A1-209ENST00000622134 VEPH1Q14D04 833 aa11.22□□□□□ -0.61
COL25A1-209ENST00000622134 IQCB1Q15051 598 aa11.22□□□□□ -0.61
COL25A1-209ENST00000622134 ZNF827Q17R98 1081 aa11.22□□□□□ -0.61
COL25A1-209ENST00000622134 TIPINQ9BVW5 301 aa11.22□□□□□ -0.61
COL25A1-209ENST00000622134 ARHGAP42A6NI28 874 aa11.22□□□□□ -0.61
COL25A1-209ENST00000622134 HNRNPCP07910 306 aaKnown RBP eCLIP11.22□□□□□ -0.61
COL25A1-209ENST00000622134 NBPF20Q3BBV1 942 aa11.22□□□□□ -0.61
COL25A1-209ENST00000622134 C12orf60Q5U649 245 aa11.22□□□□□ -0.61
COL25A1-209ENST00000622134 FBXO33Q7Z6M2 555 aa11.22□□□□□ -0.61
COL25A1-209ENST00000622134 CMTR1Q8N1G2 835 aaKnown RBP11.22□□□□□ -0.61
COL25A1-209ENST00000622134 SCFD2Q8WU76 684 aa11.22□□□□□ -0.61
COL25A1-209ENST00000622134 NSUN4Q96CB9 384 aaKnown RBP11.22□□□□□ -0.61
COL25A1-209ENST00000622134 CEP95Q96GE4 821 aa11.22□□□□□ -0.61
COL25A1-209ENST00000622134 PBKQ96KB5 322 aa11.22□□□□□ -0.61
COL25A1-209ENST00000622134 NLRP4Q96MN2 994 aa11.22□□□□□ -0.61
COL25A1-209ENST00000622134 WDR24Q96S15 920 aa11.22□□□□□ -0.61
COL25A1-209ENST00000622134 CCT8L2Q96SF2 557 aa11.22□□□□□ -0.61
COL25A1-209ENST00000622134 AAASQ9NRG9 546 aa11.22□□□□□ -0.61
COL25A1-209ENST00000622134 MMP1P03956 469 aa11.22□□□□□ -0.61
COL25A1-209ENST00000622134 KLC1Q07866 573 aa11.22□□□□□ -0.61
COL25A1-209ENST00000622134 DHX9Q08211 1270 aaKnown RBP11.22□□□□□ -0.61
COL25A1-209ENST00000622134 ADCY2Q08462 1091 aa11.22□□□□□ -0.61
COL25A1-209ENST00000622134 ARHGAP44Q17R89 818 aa11.22□□□□□ -0.61
COL25A1-209ENST00000622134 ZC3H18Q86VM9 953 aaKnown RBP11.22□□□□□ -0.61
COL25A1-209ENST00000622134 C3orf20Q8ND61 904 aa11.22□□□□□ -0.61
COL25A1-209ENST00000622134 NSUN7Q8NE18 718 aaKnown RBP11.22□□□□□ -0.61
COL25A1-209ENST00000622134 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.22□□□□□ -0.61
COL25A1-209ENST00000622134 DPF2Q92785 391 aa11.22□□□□□ -0.61
COL25A1-209ENST00000622134 ELAC2Q9BQ52 826 aaKnown RBP11.22□□□□□ -0.61
COL25A1-209ENST00000622134 HINFPQ9BQA5 517 aa11.22□□□□□ -0.61
COL25A1-209ENST00000622134 TRIM62Q9BVG3 475 aa11.22□□□□□ -0.61
COL25A1-209ENST00000622134 MAP3K20Q9NYL2 800 aaKnown RBP11.22□□□□□ -0.61
COL25A1-209ENST00000622134 EHD2Q9NZN4 543 aa11.22□□□□□ -0.61
COL25A1-209ENST00000622134 IPO11Q9UI26 975 aaKnown RBP11.22□□□□□ -0.61
COL25A1-209ENST00000622134 MAPK13O15264 365 aa11.21□□□□□ -0.61
COL25A1-209ENST00000622134 DCTN3O75935 186 aa11.21□□□□□ -0.61
COL25A1-209ENST00000622134 P4HBP07237 508 aaKnown RBP11.21□□□□□ -0.61
COL25A1-209ENST00000622134 SRGNP10124 158 aa11.21□□□□□ -0.61
COL25A1-209ENST00000622134 TXNP10599 105 aaKnown RBP11.21□□□□□ -0.61
COL25A1-209ENST00000622134 MDH1P40925 334 aaKnown RBP11.21□□□□□ -0.61
COL25A1-209ENST00000622134 NSFP46459 744 aaKnown RBP11.21□□□□□ -0.61
COL25A1-209ENST00000622134 ESRRGP62508 458 aa11.21□□□□□ -0.61
COL25A1-209ENST00000622134 IER5Q5VY09 327 aa11.21□□□□□ -0.61
COL25A1-209ENST00000622134 CHMP6Q96FZ7 201 aa11.21□□□□□ -0.61
COL25A1-209ENST00000622134 PGBD1Q96JS3 809 aa11.21□□□□□ -0.61
COL25A1-209ENST00000622134 KIAA1210Q9ULL0 1709 aa11.21□□□□□ -0.61
COL25A1-209ENST00000622134 DEPDC5O75140 1603 aa11.21□□□□□ -0.61
COL25A1-209ENST00000622134 SART1O43290 800 aaKnown RBP11.21□□□□□ -0.61
COL25A1-209ENST00000622134 BUB1O43683 1085 aa11.21□□□□□ -0.61
COL25A1-209ENST00000622134 KPNA6O60684 536 aa11.21□□□□□ -0.61
COL25A1-209ENST00000622134 TFRCP02786 760 aaKnown RBP11.21□□□□□ -0.61
COL25A1-209ENST00000622134 RPN1P04843 607 aaKnown RBP11.21□□□□□ -0.61
COL25A1-209ENST00000622134 PPM1KQ8N3J5 372 aa11.21□□□□□ -0.61
COL25A1-209ENST00000622134 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.21□□□□□ -0.61
COL25A1-209ENST00000622134 TTC1Q99614 292 aa11.21□□□□□ -0.61
COL25A1-209ENST00000622134 SMARCAD1Q9H4L7 1026 aa11.21□□□□□ -0.61
COL25A1-209ENST00000622134 MROH8Q9H579 483 aa11.21□□□□□ -0.61
COL25A1-209ENST00000622134 SLITRK6Q9H5Y7 841 aa11.21□□□□□ -0.61
COL25A1-209ENST00000622134 HPCAL4Q9UM19 191 aa11.21□□□□□ -0.61
COL25A1-209ENST00000622134 NFU1Q9UMS0 254 aa11.21□□□□□ -0.61
COL25A1-209ENST00000622134 NR2E3Q9Y5X4 410 aa11.21□□□□□ -0.61
COL25A1-209ENST00000622134 DCDC2CA8MYV0 355 aa11.21□□□□□ -0.61
COL25A1-209ENST00000622134 PGRMC1O00264 195 aaKnown RBP11.21□□□□□ -0.61
COL25A1-209ENST00000622134 STK25O00506 426 aa11.21□□□□□ -0.61
COL25A1-209ENST00000622134 MMEP08473 750 aa11.21□□□□□ -0.61
COL25A1-209ENST00000622134 PDHA1P08559 390 aa11.21□□□□□ -0.61
COL25A1-209ENST00000622134 SCP2P22307 547 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms