RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 SEL1LQ9UBV2 794 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 ARMCX3Q9UH62 379 aaPredicted RBP3.53□□□□□ -1.84
U1.39-201ENST00000621562 ADAMTS1Q9UHI8 967 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 SLC12A6Q9UHW9 1150 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 ZBTB21Q9ULJ3 1066 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 TTC7AQ9ULT0 858 aaPredicted RBP3.53□□□□□ -1.84
U1.39-201ENST00000621562 DNM3Q9UQ16 869 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 USP20Q9Y2K6 914 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 RABGAP1Q9Y3P9 1069 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 NR2E1Q9Y466 385 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 STK24Q9Y6E0 443 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 BZW2Q9Y6E2 419 aaKnown RBP3.53□□□□□ -1.84
U1.39-201ENST00000621562 TRPM7Q96QT4 1865 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 SCN4AP35499 1836 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 NUP205Q92621 2012 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 PTPRDP23468 1912 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 PFASO15067 1338 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 C5orf60A6NFR6 353 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 SPDYE2BA6NHP3 402 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 SPDYE3A6NKU9 549 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 TISP43B9A030 160 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 MYO1FO00160 1098 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 PGRMC1O00264 195 aaKnown RBP3.52□□□□□ -1.85
U1.39-201ENST00000621562 KCNK3O14649 394 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 PLSCR1O15162 318 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 PMM2O15305 246 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 CALUO43852 315 aaPredicted RBP3.52□□□□□ -1.85
U1.39-201ENST00000621562 OPA1O60313 960 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 BUB1BO60566 1050 aaPredicted RBP3.52□□□□□ -1.85
U1.39-201ENST00000621562 HSF2BPO75031 334 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 LRRN2O75325 713 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 TBCAO75347 108 aaKnown RBP3.52□□□□□ -1.85
U1.39-201ENST00000621562 MTA2O94776 668 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 GCNT3O95395 438 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 KRT14P02533 472 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 KRT18P05783 430 aaKnown RBP3.52□□□□□ -1.85
U1.39-201ENST00000621562 ADRB2P07550 413 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 MMP10P09238 476 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 VIL1P09327 827 aaKnown RBP3.52□□□□□ -1.85
U1.39-201ENST00000621562 PAEPP09466 180 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 H2AFZP0C0S5 128 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 TMEM253P0C7T8 217 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 SPDYE6P0CI01 402 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 TRIM49P0CI25 452 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 TRIM49CP0CI26 452 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 ARP10275 920 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 XRCC5P13010 732 aaKnown RBP3.52□□□□□ -1.85
U1.39-201ENST00000621562 CHRNB2P17787 502 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 VCAM1P19320 739 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 NR1D1P20393 614 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 GUCY2CP25092 1073 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 ALDH1B1P30837 517 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 HSPA1LP34931 641 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 SOX5P35711 763 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 PDE6BP35913 854 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 FLT3P36888 993 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 HSD17B3P37058 310 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 PAFAH1B1P43034 410 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 PTGER2P43116 358 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 PTGIRP43119 386 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 MATR3P43243 847 aaKnown RBP eCLIP3.52□□□□□ -1.85
U1.39-201ENST00000621562 MAGEA9P43362 315 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 NOP2P46087 812 aaKnown RBP3.52□□□□□ -1.85
U1.39-201ENST00000621562 MARCKSL1P49006 195 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 FNTAP49354 379 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 HSD17B4P51659 736 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 PTENP60484 403 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 TNNC1P63316 161 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 MYL7Q01449 175 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 MAP3K10Q02779 954 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 GUCY2DQ02846 1103 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 ARID5AQ03989 594 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 ZNF844Q08AG5 666 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 ITGB3BPQ13352 177 aaPredicted RBP3.52□□□□□ -1.85
U1.39-201ENST00000621562 PDCLQ13371 301 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 PLS1Q14651 629 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 DRAP1Q14919 205 aaPredicted RBP3.52□□□□□ -1.85
U1.39-201ENST00000621562 PPP2R5AQ15172 486 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 RPS6KA1Q15418 735 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 SIX1Q15475 284 aaPredicted RBP3.52□□□□□ -1.85
U1.39-201ENST00000621562 PTGISQ16647 500 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 AOC3Q16853 763 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 ZNF568Q3ZCX4 644 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 SPDYE2Q495Y8 402 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 DCAF17Q5H9S7 520 aaPredicted RBP3.52□□□□□ -1.85
U1.39-201ENST00000621562 UBAP2Q5T6F2 1119 aaKnown RBP3.52□□□□□ -1.85
U1.39-201ENST00000621562 CCDC181Q5TID7 509 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 AGBL2Q5U5Z8 902 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 LRCH2Q5VUJ6 765 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 DUPD1Q68J44 220 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 CCDC70Q6NSX1 233 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 C11orf63Q6NUN7 778 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 C6orf89Q6UWU4 347 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 ZDHHC24Q6UX98 284 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 H2AFVQ71UI9 128 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 ZNF720Q7Z2F6 126 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 KRT27Q7Z3Y8 459 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 TMC3Q7Z5M5 1100 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 PACS2Q86VP3 889 aa3.52□□□□□ -1.85
U1.39-201ENST00000621562 DDX42Q86XP3 938 aaKnown RBP eCLIP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms