RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 TNFRSF25Q93038 417 aa23.02■■□□□ 1.28
SMC6-210ENST00000621152 LIMCH1Q9UPQ0 1083 aa23.02■■□□□ 1.28
SMC6-210ENST00000621152 CUL9Q8IWT3 2517 aa23.01■■□□□ 1.27
SMC6-210ENST00000621152 IGKV6-21A0A0C4DH24 114 aa23.01■■□□□ 1.27
SMC6-210ENST00000621152 MAFO75444 373 aaPredicted RBP23.01■■□□□ 1.27
SMC6-210ENST00000621152 CSDE1O75534 798 aaKnown RBP23.01■■□□□ 1.27
SMC6-210ENST00000621152 CSPG5O95196 566 aa23.01■■□□□ 1.27
SMC6-210ENST00000621152 MMP1P03956 469 aa23.01■■□□□ 1.27
SMC6-210ENST00000621152 FGFR4P22455 802 aa23.01■■□□□ 1.27
SMC6-210ENST00000621152 NAALADL2Q58DX5 795 aa23.01■■□□□ 1.27
SMC6-210ENST00000621152 SPOUT1Q5T280 376 aaKnown RBP23.01■■□□□ 1.27
SMC6-210ENST00000621152 KLHL23Q8NBE8 558 aa23.01■■□□□ 1.27
SMC6-210ENST00000621152 SPPL3Q8TCT6 385 aa23.01■■□□□ 1.27
SMC6-210ENST00000621152 P2RX5Q93086 422 aa23.01■■□□□ 1.27
SMC6-210ENST00000621152 GCOM2Q9BZD3 368 aaPredicted RBP23.01■■□□□ 1.27
SMC6-210ENST00000621152 ELAC1Q9H777 363 aaKnown RBP23.01■■□□□ 1.27
SMC6-210ENST00000621152 TMEM161AQ9NX61 479 aa23.01■■□□□ 1.27
SMC6-210ENST00000621152 SUCLA2Q9P2R7 463 aaPredicted RBP23.01■■□□□ 1.27
SMC6-210ENST00000621152 TCF20Q9UGU0 1960 aaKnown RBP23.01■■□□□ 1.27
SMC6-210ENST00000621152 NPEPPSP55786 919 aa23■■□□□ 1.27
SMC6-210ENST00000621152 LEXMQ3ZCV2 418 aa23■■□□□ 1.27
SMC6-210ENST00000621152 PLA2G4FQ68DD2 849 aa23■■□□□ 1.27
SMC6-210ENST00000621152 NCAPH2Q6IBW4 605 aa23■■□□□ 1.27
SMC6-210ENST00000621152 DIS3L2Q8IYB7 885 aaKnown RBP23■■□□□ 1.27
SMC6-210ENST00000621152 SLFN12Q8IYM2 578 aa23■■□□□ 1.27
SMC6-210ENST00000621152 CYP26B1Q9NR63 512 aa23■■□□□ 1.27
SMC6-210ENST00000621152 RGL1Q9NZL6 768 aa23■■□□□ 1.27
SMC6-210ENST00000621152 REV3LO60673 3130 aa23■■□□□ 1.27
SMC6-210ENST00000621152 VCANP13611 3396 aa22.99■■□□□ 1.27
SMC6-210ENST00000621152 ITGB1P05556 798 aa22.99■■□□□ 1.27
SMC6-210ENST00000621152 FGFR1P11362 822 aa22.99■■□□□ 1.27
SMC6-210ENST00000621152 ST3GAL1Q11201 340 aa22.99■■□□□ 1.27
SMC6-210ENST00000621152 RHPN2Q8IUC4 686 aa22.99■■□□□ 1.27
SMC6-210ENST00000621152 ZNF579Q8NAF0 562 aaKnown RBP22.99■■□□□ 1.27
SMC6-210ENST00000621152 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.99■■□□□ 1.27
SMC6-210ENST00000621152 PABPC5Q96DU9 382 aaKnown RBP22.99■■□□□ 1.27
SMC6-210ENST00000621152 CEP170P1Q96L14 293 aa22.99■■□□□ 1.27
SMC6-210ENST00000621152 JPH2Q9BR39 696 aaPredicted RBP22.99■■□□□ 1.27
SMC6-210ENST00000621152 TYW1Q9NV66 732 aaKnown RBP22.99■■□□□ 1.27
SMC6-210ENST00000621152 WRAP73Q9P2S5 460 aaPredicted RBP22.99■■□□□ 1.27
SMC6-210ENST00000621152 PCDHB12Q9Y5F1 795 aa22.99■■□□□ 1.27
SMC6-210ENST00000621152 A0A087WZ62 844 aa22.98■■□□□ 1.27
SMC6-210ENST00000621152 CAMK1Q14012 370 aa22.98■■□□□ 1.27
SMC6-210ENST00000621152 KSR1Q8IVT5 923 aa22.98■■□□□ 1.27
SMC6-210ENST00000621152 CCDC83Q8IWF9 413 aa22.98■■□□□ 1.27
SMC6-210ENST00000621152 C4orf19Q8IY42 314 aa22.98■■□□□ 1.27
SMC6-210ENST00000621152 DYDC2Q96IM9 177 aa22.98■■□□□ 1.27
SMC6-210ENST00000621152 FDXACB1Q9BRP7 624 aaPredicted RBP22.98■■□□□ 1.27
SMC6-210ENST00000621152 IGFLR1Q9H665 355 aa22.98■■□□□ 1.27
SMC6-210ENST00000621152 AAASQ9NRG9 546 aa22.98■■□□□ 1.27
SMC6-210ENST00000621152 CLDND1Q9NY35 253 aa22.98■■□□□ 1.27
SMC6-210ENST00000621152 PCDHA12Q9UN75 941 aa22.98■■□□□ 1.27
SMC6-210ENST00000621152 NLRC5Q86WI3 1866 aa22.98■■□□□ 1.27
SMC6-210ENST00000621152 WDR81Q562E7 1941 aa22.98■■□□□ 1.27
SMC6-210ENST00000621152 H3BQ06 376 aaPredicted RBP22.97■■□□□ 1.27
SMC6-210ENST00000621152 NCK2O43639 380 aa22.97■■□□□ 1.27
SMC6-210ENST00000621152 DNAJB1P25685 340 aa22.97■■□□□ 1.27
SMC6-210ENST00000621152 GUCY1B3Q02153 619 aa22.97■■□□□ 1.27
SMC6-210ENST00000621152 CTTNQ14247 550 aaKnown RBP22.97■■□□□ 1.27
SMC6-210ENST00000621152 OTUD6AQ7L8S5 288 aa22.97■■□□□ 1.27
SMC6-210ENST00000621152 ECHDC2Q86YB7 292 aa22.97■■□□□ 1.27
SMC6-210ENST00000621152 TPH2Q8IWU9 490 aa22.97■■□□□ 1.27
SMC6-210ENST00000621152 RNF169Q8NCN4 708 aa22.97■■□□□ 1.27
SMC6-210ENST00000621152 NEK9Q8TD19 979 aa22.97■■□□□ 1.27
SMC6-210ENST00000621152 POF1BQ8WVV4 589 aa22.97■■□□□ 1.27
SMC6-210ENST00000621152 RALGAPA2Q2PPJ7 1873 aa22.96■■□□□ 1.27
SMC6-210ENST00000621152 ATP2B1P20020 1258 aa22.96■■□□□ 1.27
SMC6-210ENST00000621152 YWHABP31946 246 aaKnown RBP22.96■■□□□ 1.27
SMC6-210ENST00000621152 SPIRE1Q08AE8 756 aa22.96■■□□□ 1.27
SMC6-210ENST00000621152 HYAL1Q12794 435 aa22.96■■□□□ 1.27
SMC6-210ENST00000621152 SAFBQ15424 915 aaKnown RBP eCLIP22.96■■□□□ 1.27
SMC6-210ENST00000621152 CALCRLQ16602 461 aa22.96■■□□□ 1.27
SMC6-210ENST00000621152 EXOC8Q8IYI6 725 aa22.96■■□□□ 1.27
SMC6-210ENST00000621152 SLC7A3Q8WY07 619 aa22.96■■□□□ 1.27
SMC6-210ENST00000621152 LXNQ9BS40 222 aa22.96■■□□□ 1.27
SMC6-210ENST00000621152 INO80BQ9C086 356 aaPredicted RBP22.96■■□□□ 1.27
SMC6-210ENST00000621152 TMEM117Q9H0C3 514 aa22.96■■□□□ 1.27
SMC6-210ENST00000621152 ZSWIM4Q9H7M6 989 aa22.96■■□□□ 1.27
SMC6-210ENST00000621152 A0A0U1RQF3 1178 aa22.95■■□□□ 1.26
SMC6-210ENST00000621152 ZBTB39O15060 712 aa22.95■■□□□ 1.26
SMC6-210ENST00000621152 HOXA2O43364 376 aa22.95■■□□□ 1.26
SMC6-210ENST00000621152 SLITRK3O94933 977 aa22.95■■□□□ 1.26
SMC6-210ENST00000621152 TXKP42681 527 aa22.95■■□□□ 1.26
SMC6-210ENST00000621152 POLGP54098 1239 aaPredicted RBP22.95■■□□□ 1.26
SMC6-210ENST00000621152 CYP4A11Q02928 519 aa22.95■■□□□ 1.26
SMC6-210ENST00000621152 C8orf34Q49A92 452 aa22.95■■□□□ 1.26
SMC6-210ENST00000621152 PTCRAQ6ISU1 281 aaPredicted RBP22.95■■□□□ 1.26
SMC6-210ENST00000621152 ZNF410Q86VK4 478 aa22.95■■□□□ 1.26
SMC6-210ENST00000621152 MICAL1Q8TDZ2 1067 aa22.95■■□□□ 1.26
SMC6-210ENST00000621152 TMEM143Q96AN5 459 aa22.95■■□□□ 1.26
SMC6-210ENST00000621152 ZSCAN31Q96LW9 406 aaPredicted RBP22.95■■□□□ 1.26
SMC6-210ENST00000621152 NLRP4Q96MN2 994 aa22.95■■□□□ 1.26
SMC6-210ENST00000621152 CASD1Q96PB1 797 aa22.95■■□□□ 1.26
SMC6-210ENST00000621152 LLPHQ9BRT6 129 aaKnown RBP22.95■■□□□ 1.26
SMC6-210ENST00000621152 CWH43Q9H720 699 aa22.95■■□□□ 1.26
SMC6-210ENST00000621152 CHST12Q9NRB3 414 aa22.95■■□□□ 1.26
SMC6-210ENST00000621152 RNF19AQ9NV58 838 aa22.95■■□□□ 1.26
SMC6-210ENST00000621152 DACT1Q9NYF0 836 aa22.95■■□□□ 1.26
SMC6-210ENST00000621152 HCSTQ9UBK5 93 aa22.95■■□□□ 1.26
SMC6-210ENST00000621152 GRXCR2A6NFK2 248 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms