RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 MYH7BA7E2Y1 1941 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 POTEFA5A3E0 1075 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 USP17L15C9J2P7 530 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 USP17L13C9JLJ4 530 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 USP17L11C9JVI0 530 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 USP17L18D6R9N7 530 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 USP17L22D6RA61 530 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 USP17L17D6RBQ6 530 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 USP17L19D6RCP7 530 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 USP17L20D6RJB6 530 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 SPOPO43791 374 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 POTEIP0CG38 1075 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 CREB1P16220 341 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 PPP1R2P41236 205 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 VPS41P49754 854 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 MXRA7P84157 204 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 USP17L24Q0WX57 530 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 SLC15A2Q16348 729 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 DENND2CQ68D51 928 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 USP17L6PQ6QN14 398 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 POTEGQ6S5H5 508 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 POTEEQ6S8J3 1075 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 PODNQ7Z5L7 613 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 SP8Q8IXZ3 490 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 SLC17A8Q8NDX2 589 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 TTC16Q8NEE8 873 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 RBM46Q8TBY0 533 aaKnown RBP7.52□□□□□ -1.21
NEDD9-216ENST00000620854 SCFD1Q8WVM8 642 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 RUBCNQ92622 972 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 CRAMP1Q96RY5 1269 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 ERVK-5Q9HDB9 667 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 RIC8AQ9NPQ8 531 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 DAAM1Q9Y4D1 1078 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 COL1A1P02452 1464 aaPredicted RBP7.52□□□□□ -1.21
NEDD9-216ENST00000620854 PALM3A6NDB9 673 aaPredicted RBP7.52□□□□□ -1.21
NEDD9-216ENST00000620854 CLGNO14967 610 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 FLOT1O75955 427 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 ACSL3O95573 720 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 FGRP09769 529 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 DESP17661 470 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 SLC8A1P32418 973 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 MMP14P50281 582 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 GALCP54803 685 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 DR1Q01658 176 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 IRF2BP2Q7Z5L9 587 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 C18orf8Q96DM3 657 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 MAGEF1Q9HAY2 307 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 DDX25Q9UHL0 483 aaKnown RBP7.52□□□□□ -1.21
NEDD9-216ENST00000620854 AJAP1Q9UKB5 411 aaPredicted RBP7.52□□□□□ -1.21
NEDD9-216ENST00000620854 AMFRQ9UKV5 643 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 AGAP1Q9UPQ3 857 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 UBOX5O94941 541 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 PLA2G4BP0C869 781 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 CHRM1P11229 460 aaPredicted RBP7.52□□□□□ -1.21
NEDD9-216ENST00000620854 XRCC5P13010 732 aaKnown RBP7.52□□□□□ -1.21
NEDD9-216ENST00000620854 GYS1P13807 737 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 MRPL12P52815 198 aaKnown RBP7.52□□□□□ -1.21
NEDD9-216ENST00000620854 GPSM2P81274 684 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 MTMR3Q13615 1198 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 PRKG1Q13976 671 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 NUGGCQ68CJ6 796 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 TTBK2Q6IQ55 1244 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 SEPT14Q6ZU15 432 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 AGAP11Q8TF27 550 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 PBKQ96KB5 322 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 CCDC77Q9BR77 488 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 IQCGQ9H095 443 aaKnown RBP7.52□□□□□ -1.21
NEDD9-216ENST00000620854 SYNCQ9H7C4 482 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 FGFR1OP2Q9NVK5 253 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 MTRF1LQ9UGC7 380 aaKnown RBP7.52□□□□□ -1.21
NEDD9-216ENST00000620854 SWAP70Q9UH65 585 aa7.52□□□□□ -1.21
NEDD9-216ENST00000620854 DISP2A7MBM2 1401 aa7.51□□□□□ -1.21
NEDD9-216ENST00000620854 CLRN2A0PK11 232 aa7.51□□□□□ -1.21
NEDD9-216ENST00000620854 KIF1CO43896 1103 aaKnown RBP7.51□□□□□ -1.21
NEDD9-216ENST00000620854 HARSP12081 509 aaKnown RBP7.51□□□□□ -1.21
NEDD9-216ENST00000620854 RASA1P20936 1047 aa7.51□□□□□ -1.21
NEDD9-216ENST00000620854 CHRNA5P30532 468 aa7.51□□□□□ -1.21
NEDD9-216ENST00000620854 ADCY7P51828 1080 aa7.51□□□□□ -1.21
NEDD9-216ENST00000620854 SNAP25P60880 206 aa7.51□□□□□ -1.21
NEDD9-216ENST00000620854 PSMC6P62333 389 aa7.51□□□□□ -1.21
NEDD9-216ENST00000620854 TRIP13Q15645 432 aaPredicted RBP7.51□□□□□ -1.21
NEDD9-216ENST00000620854 LRIG3Q6UXM1 1119 aa7.51□□□□□ -1.21
NEDD9-216ENST00000620854 TRIM59Q8IWR1 403 aa7.51□□□□□ -1.21
NEDD9-216ENST00000620854 SLC35G2Q8TBE7 412 aa7.51□□□□□ -1.21
NEDD9-216ENST00000620854 KLHL29Q96CT2 875 aa7.51□□□□□ -1.21
NEDD9-216ENST00000620854 DNAJC19Q96DA6 116 aa7.51□□□□□ -1.21
NEDD9-216ENST00000620854 IQCDQ96DY2 449 aa7.51□□□□□ -1.21
NEDD9-216ENST00000620854 NUCKS1Q9H1E3 243 aaKnown RBP7.51□□□□□ -1.21
NEDD9-216ENST00000620854 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.51□□□□□ -1.212e-11■■□□□ 11.8
NEDD9-216ENST00000620854 GCNT4Q9P109 453 aa7.51□□□□□ -1.21
NEDD9-216ENST00000620854 RSPH10B2B2RC85 870 aa7.51□□□□□ -1.21
NEDD9-216ENST00000620854 RSPH10BP0C881 870 aa7.51□□□□□ -1.21
NEDD9-216ENST00000620854 CDK8P49336 464 aa7.51□□□□□ -1.21
NEDD9-216ENST00000620854 CCNHP51946 323 aaPredicted RBP7.51□□□□□ -1.21
NEDD9-216ENST00000620854 PMS2P54278 862 aa7.51□□□□□ -1.21
NEDD9-216ENST00000620854 LONRF1Q17RB8 773 aa7.51□□□□□ -1.21
NEDD9-216ENST00000620854 CERKLQ49MI3 558 aaPredicted RBP7.51□□□□□ -1.21
NEDD9-216ENST00000620854 WLSQ5T9L3 541 aa7.51□□□□□ -1.21
NEDD9-216ENST00000620854 ZNF746Q6NUN9 644 aaPredicted RBP7.51□□□□□ -1.21
NEDD9-216ENST00000620854 TRPM8Q7Z2W7 1104 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms