RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 IRX4P78413 519 aa12.2□□□□□ -0.46
CLIP1-219ENST00000620786 NSUN2Q08J23 767 aaKnown RBP eCLIP12.2□□□□□ -0.46
CLIP1-219ENST00000620786 SREBF2Q12772 1141 aa12.2□□□□□ -0.46
CLIP1-219ENST00000620786 RESP18Q5W5W9 173 aa12.2□□□□□ -0.46
CLIP1-219ENST00000620786 KLC3Q6P597 504 aa12.2□□□□□ -0.46
CLIP1-219ENST00000620786 POTEGQ6S5H5 508 aa12.2□□□□□ -0.46
CLIP1-219ENST00000620786 POTEEQ6S8J3 1075 aa12.2□□□□□ -0.46
CLIP1-219ENST00000620786 FRA10AC1Q70Z53 315 aa12.2□□□□□ -0.46
CLIP1-219ENST00000620786 ZNF280CQ8ND82 737 aa12.2□□□□□ -0.46
CLIP1-219ENST00000620786 ACRBPQ8NEB7 543 aa12.2□□□□□ -0.46
CLIP1-219ENST00000620786 SETD1BQ9UPS6 1966 aaKnown RBP12.2□□□□□ -0.46
CLIP1-219ENST00000620786 BAG2O95816 211 aa12.2□□□□□ -0.46
CLIP1-219ENST00000620786 GMPSP49915 693 aaPredicted RBP12.2□□□□□ -0.46
CLIP1-219ENST00000620786 SIRT2Q8IXJ6 389 aa12.2□□□□□ -0.46
CLIP1-219ENST00000620786 MB21D1Q8N884 522 aa12.2□□□□□ -0.46
CLIP1-219ENST00000620786 JPH1Q9HDC5 661 aaPredicted RBP12.2□□□□□ -0.46
CLIP1-219ENST00000620786 KLHL8Q9P2G9 620 aaPredicted RBP12.2□□□□□ -0.46
CLIP1-219ENST00000620786 CLTCQ00610 1675 aaKnown RBP12.2□□□□□ -0.46
CLIP1-219ENST00000620786 C19orf81C9J6K1 198 aa12.19□□□□□ -0.46
CLIP1-219ENST00000620786 TRIM42Q8IWZ5 723 aa12.19□□□□□ -0.46
CLIP1-219ENST00000620786 TMEM35BQ8NCS4 154 aa12.19□□□□□ -0.46
CLIP1-219ENST00000620786 TDRD7Q8NHU6 1098 aaKnown RBP12.19□□□□□ -0.46
CLIP1-219ENST00000620786 ENOX1Q8TC92 643 aaKnown RBP12.19□□□□□ -0.46
CLIP1-219ENST00000620786 OSBPL5Q9H0X9 879 aaPredicted RBP12.19□□□□□ -0.46
CLIP1-219ENST00000620786 DAGLAQ9Y4D2 1042 aa12.19□□□□□ -0.46
CLIP1-219ENST00000620786 SOWAHDA6NJG2 315 aa12.19□□□□□ -0.46
CLIP1-219ENST00000620786 CTSHP09668 335 aa12.19□□□□□ -0.46
CLIP1-219ENST00000620786 C6orf222P0C671 652 aaPredicted RBP12.19□□□□□ -0.46
CLIP1-219ENST00000620786 HUNKP57058 714 aa12.19□□□□□ -0.46
CLIP1-219ENST00000620786 TMCO4Q5TGY1 634 aa12.19□□□□□ -0.46
CLIP1-219ENST00000620786 OXER1Q8TDS5 423 aa12.19□□□□□ -0.46
CLIP1-219ENST00000620786 STRIP2Q9ULQ0 834 aa12.19□□□□□ -0.46
CLIP1-219ENST00000620786 DYNC1LI2O43237 492 aaPredicted RBP12.19□□□□□ -0.46
CLIP1-219ENST00000620786 TOM1L1O75674 476 aa12.19□□□□□ -0.46
CLIP1-219ENST00000620786 MT-ND3P03897 115 aa12.19□□□□□ -0.46
CLIP1-219ENST00000620786 EIF2AK1Q9BQI3 630 aaKnown RBP12.19□□□□□ -0.46
CLIP1-219ENST00000620786 EPB41L5Q9HCM4 733 aa12.19□□□□□ -0.46
CLIP1-219ENST00000620786 VCX3AQ9NNX9 186 aa12.19□□□□□ -0.46
CLIP1-219ENST00000620786 A8MXQ7 604 aa12.19□□□□□ -0.46
CLIP1-219ENST00000620786 UPP2O95045 317 aa12.19□□□□□ -0.46
CLIP1-219ENST00000620786 MOCS2O96007 188 aaPredicted RBP12.19□□□□□ -0.46
CLIP1-219ENST00000620786 RWDD2BP57060 319 aa12.19□□□□□ -0.46
CLIP1-219ENST00000620786 ETF1P62495 437 aaKnown RBP12.19□□□□□ -0.46
CLIP1-219ENST00000620786 YWHAHQ04917 246 aaPredicted RBP12.19□□□□□ -0.46
CLIP1-219ENST00000620786 NME3Q13232 169 aa12.19□□□□□ -0.46
CLIP1-219ENST00000620786 KYAT1Q16773 422 aa12.19□□□□□ -0.46
CLIP1-219ENST00000620786 BBS9Q3SYG4 887 aa12.19□□□□□ -0.46
CLIP1-219ENST00000620786 PRAMEF18Q5VWM3 479 aa12.19□□□□□ -0.46
CLIP1-219ENST00000620786 MXD3Q9BW11 206 aa12.19□□□□□ -0.46
CLIP1-219ENST00000620786 TRPC7Q9HCX4 862 aa12.19□□□□□ -0.46
CLIP1-219ENST00000620786 LAMC1P11047 1609 aa12.19□□□□□ -0.46
CLIP1-219ENST00000620786 QRICH2Q9H0J4 1663 aa12.19□□□□□ -0.46
CLIP1-219ENST00000620786 CCL15-CCL14A0A0B4J2E2 113 aa12.19□□□□□ -0.46
CLIP1-219ENST00000620786 TTI1O43156 1089 aa12.19□□□□□ -0.46
CLIP1-219ENST00000620786 EZH2Q15910 746 aaKnown RBP12.19□□□□□ -0.46
CLIP1-219ENST00000620786 CCL15Q16663 113 aa12.19□□□□□ -0.46
CLIP1-219ENST00000620786 SAAL1Q96ER3 474 aa12.19□□□□□ -0.46
CLIP1-219ENST00000620786 ATP8A1Q9Y2Q0 1164 aa12.19□□□□□ -0.46
CLIP1-219ENST00000620786 GSG1L2A8MUP6 293 aa12.18□□□□□ -0.46
CLIP1-219ENST00000620786 TJP3O95049 919 aa12.18□□□□□ -0.46
CLIP1-219ENST00000620786 RALAP11233 206 aa12.18□□□□□ -0.46
CLIP1-219ENST00000620786 HSPA6P17066 643 aa12.18□□□□□ -0.46
CLIP1-219ENST00000620786 TBXAS1P24557 533 aaPredicted RBP12.18□□□□□ -0.46
CLIP1-219ENST00000620786 VAMP7P51809 220 aa12.18□□□□□ -0.46
CLIP1-219ENST00000620786 TKFCQ3LXA3 575 aa12.18□□□□□ -0.46
CLIP1-219ENST00000620786 STYK1Q6J9G0 422 aa12.18□□□□□ -0.46
CLIP1-219ENST00000620786 ZNF560Q96MR9 790 aa12.18□□□□□ -0.46
CLIP1-219ENST00000620786 DNAJC5Q9H3Z4 198 aa12.18□□□□□ -0.46
CLIP1-219ENST00000620786 PCDHA10Q9Y5I2 948 aa12.18□□□□□ -0.46
CLIP1-219ENST00000620786 MAP3K7O43318 606 aa12.18□□□□□ -0.46
CLIP1-219ENST00000620786 EVI5O60447 810 aa12.18□□□□□ -0.46
CLIP1-219ENST00000620786 CALB1P05937 261 aa12.18□□□□□ -0.46
CLIP1-219ENST00000620786 STAT5BP51692 787 aa12.18□□□□□ -0.46
CLIP1-219ENST00000620786 RCN2Q14257 317 aa12.18□□□□□ -0.46
CLIP1-219ENST00000620786 MIPOL1Q8TD10 442 aa12.18□□□□□ -0.46
CLIP1-219ENST00000620786 CDC42BPBQ9Y5S2 1711 aa12.18□□□□□ -0.46
CLIP1-219ENST00000620786 KIF28PB7ZC32 967 aa12.18□□□□□ -0.46
CLIP1-219ENST00000620786 CETPP11597 493 aa12.18□□□□□ -0.46
CLIP1-219ENST00000620786 DCAF4L1Q3SXM0 396 aa12.18□□□□□ -0.46
CLIP1-219ENST00000620786 TRIM67Q6ZTA4 783 aa12.18□□□□□ -0.46
CLIP1-219ENST00000620786 KLC2Q9H0B6 622 aa12.18□□□□□ -0.46
CLIP1-219ENST00000620786 SP110Q9HB58 689 aa12.18□□□□□ -0.46
CLIP1-219ENST00000620786 GINM1Q9NU53 330 aa12.18□□□□□ -0.46
CLIP1-219ENST00000620786 NBPF26B4DH59 902 aa12.18□□□□□ -0.46
CLIP1-219ENST00000620786 PLS3P13797 630 aa12.18□□□□□ -0.46
CLIP1-219ENST00000620786 SERPINB6P35237 376 aa12.18□□□□□ -0.46
CLIP1-219ENST00000620786 SLMAPQ14BN4 828 aa12.18□□□□□ -0.46
CLIP1-219ENST00000620786 NBPF10Q6P3W6 841 aaKnown RBP12.18□□□□□ -0.46
CLIP1-219ENST00000620786 RHOT2Q8IXI1 618 aa12.18□□□□□ -0.46
CLIP1-219ENST00000620786 GPD1LQ8N335 351 aa12.18□□□□□ -0.46
CLIP1-219ENST00000620786 NBPF15Q8N660 670 aa12.18□□□□□ -0.46
CLIP1-219ENST00000620786 CFAP61Q8NHU2 1237 aa12.18□□□□□ -0.46
CLIP1-219ENST00000620786 ACAP3Q96P50 834 aa12.18□□□□□ -0.46
CLIP1-219ENST00000620786 MYOZ2Q9NPC6 264 aa12.18□□□□□ -0.46
CLIP1-219ENST00000620786 GJB4Q9NTQ9 266 aa12.18□□□□□ -0.46
CLIP1-219ENST00000620786 SUCLA2Q9P2R7 463 aaPredicted RBP12.18□□□□□ -0.46
CLIP1-219ENST00000620786 CNOT8Q9UFF9 292 aaKnown RBP12.18□□□□□ -0.46
CLIP1-219ENST00000620786 ANAPC7Q9UJX3 599 aa12.18□□□□□ -0.46
CLIP1-219ENST00000620786 WDR19Q8NEZ3 1342 aa12.18□□□□□ -0.46
CLIP1-219ENST00000620786 GH1P01241 217 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms