RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 EFCAB12Q6NXP0 572 aa18.07■□□□□ 0.48
CD40-207ENST00000620709 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.07■□□□□ 0.48
CD40-207ENST00000620709 SLC5A5Q92911 643 aa18.07■□□□□ 0.48
CD40-207ENST00000620709 CLP1Q92989 425 aaKnown RBP18.07■□□□□ 0.48
CD40-207ENST00000620709 SCLT1Q96NL6 688 aa18.07■□□□□ 0.48
CD40-207ENST00000620709 MAP7D2Q96T17 732 aa18.07■□□□□ 0.48
CD40-207ENST00000620709 LMBRD1Q9NUN5 540 aa18.07■□□□□ 0.48
CD40-207ENST00000620709 KCNJ14Q9UNX9 436 aa18.07■□□□□ 0.48
CD40-207ENST00000620709 MAGEB2O15479 319 aa18.06■□□□□ 0.48
CD40-207ENST00000620709 PRPF40AO75400 957 aaKnown RBP18.06■□□□□ 0.48
CD40-207ENST00000620709 LINC00271P0C7V0 271 aa18.06■□□□□ 0.48
CD40-207ENST00000620709 IL9P15248 144 aa18.06■□□□□ 0.48
CD40-207ENST00000620709 UGCGQ16739 394 aa18.06■□□□□ 0.48
CD40-207ENST00000620709 SKOR2Q2VWA4 1001 aaPredicted RBP18.06■□□□□ 0.48
CD40-207ENST00000620709 MIER3Q7Z3K6 550 aa18.06■□□□□ 0.48
CD40-207ENST00000620709 RIT2Q99578 217 aa18.06■□□□□ 0.48
CD40-207ENST00000620709 LMAN2LQ9H0V9 348 aa18.06■□□□□ 0.48
CD40-207ENST00000620709 WDR81Q562E7 1941 aa18.05■□□□□ 0.48
CD40-207ENST00000620709 TBKBP1A7MCY6 615 aa18.05■□□□□ 0.48
CD40-207ENST00000620709 MMP1P03956 469 aa18.05■□□□□ 0.48
CD40-207ENST00000620709 COL9A1P20849 921 aa18.05■□□□□ 0.48
CD40-207ENST00000620709 TMOD1P28289 359 aa18.05■□□□□ 0.48
CD40-207ENST00000620709 JAK3P52333 1124 aa18.05■□□□□ 0.48
CD40-207ENST00000620709 NLRP11P59045 1033 aaKnown RBP18.05■□□□□ 0.48
CD40-207ENST00000620709 GNL2Q13823 731 aaKnown RBP18.05■□□□□ 0.48
CD40-207ENST00000620709 ATL3Q6DD88 541 aa18.05■□□□□ 0.48
CD40-207ENST00000620709 FAM173BQ6P4H8 233 aa18.05■□□□□ 0.48
CD40-207ENST00000620709 FAM228AQ86W67 206 aa18.05■□□□□ 0.48
CD40-207ENST00000620709 PABPC5Q96DU9 382 aaKnown RBP18.05■□□□□ 0.48
CD40-207ENST00000620709 PLVAPQ9BX97 442 aa18.05■□□□□ 0.48
CD40-207ENST00000620709 SCAND2PQ9GZW5 306 aaPredicted RBP18.05■□□□□ 0.48
CD40-207ENST00000620709 SEPT9Q9UHD8 586 aaPredicted RBP18.05■□□□□ 0.48
CD40-207ENST00000620709 MYH15Q9Y2K3 1946 aa18.05■□□□□ 0.48
CD40-207ENST00000620709 KIAA1671Q9BY89 1806 aa18.04■□□□□ 0.48
CD40-207ENST00000620709 ZNF862O60290 1169 aa18.04■□□□□ 0.48
CD40-207ENST00000620709 TRAK2O60296 914 aa18.04■□□□□ 0.48
CD40-207ENST00000620709 GPR32O75388 356 aa18.04■□□□□ 0.48
CD40-207ENST00000620709 SFNP31947 248 aa18.04■□□□□ 0.48
CD40-207ENST00000620709 SSTR3P32745 418 aaPredicted RBP18.04■□□□□ 0.48
CD40-207ENST00000620709 NONOQ15233 471 aaKnown RBP eCLIP18.04■□□□□ 0.48
CD40-207ENST00000620709 CLUL1Q15846 466 aa18.04■□□□□ 0.48
CD40-207ENST00000620709 INF2Q27J81 1249 aa18.04■□□□□ 0.48
CD40-207ENST00000620709 Q4G0T1 1027 aa18.04■□□□□ 0.48
CD40-207ENST00000620709 KLHL23Q8NBE8 558 aa18.04■□□□□ 0.48
CD40-207ENST00000620709 ZNF396Q96N95 335 aaPredicted RBP18.04■□□□□ 0.48
CD40-207ENST00000620709 GDPD2Q9HCC8 539 aa18.04■□□□□ 0.48
CD40-207ENST00000620709 RGS18Q9NS28 235 aa18.04■□□□□ 0.48
CD40-207ENST00000620709 C1orf112Q9NSG2 853 aa18.04■□□□□ 0.48
CD40-207ENST00000620709 CFAP45Q9UL16 551 aa18.04■□□□□ 0.48
CD40-207ENST00000620709 PLAGL2Q9UPG8 496 aa18.04■□□□□ 0.48
CD40-207ENST00000620709 TCHHQ07283 1943 aa18.04■□□□□ 0.48
CD40-207ENST00000620709 LETM2Q2VYF4 491 aa18.03■□□□□ 0.48
CD40-207ENST00000620709 MTERF2Q49AM1 385 aa18.03■□□□□ 0.48
CD40-207ENST00000620709 FAM102BQ5T8I3 360 aa18.03■□□□□ 0.48
CD40-207ENST00000620709 SLC24A5Q71RS6 500 aa18.03■□□□□ 0.48
CD40-207ENST00000620709 CRIPAKQ8N1N5 446 aa18.03■□□□□ 0.48
CD40-207ENST00000620709 EPHX3Q9H6B9 360 aa18.03■□□□□ 0.48
CD40-207ENST00000620709 ATP6V0A4Q9HBG4 840 aa18.03■□□□□ 0.48
CD40-207ENST00000620709 RNF216Q9NWF9 866 aaPredicted RBP18.03■□□□□ 0.48
CD40-207ENST00000620709 DDX25Q9UHL0 483 aaKnown RBP18.03■□□□□ 0.48
CD40-207ENST00000620709 RAPGEFL1Q9UHV5 662 aa18.03■□□□□ 0.48
CD40-207ENST00000620709 ATG2AQ2TAZ0 1938 aa18.03■□□□□ 0.48
CD40-207ENST00000620709 CCDC194A0A1B0GVG4 234 aa18.03■□□□□ 0.48
CD40-207ENST00000620709 PSMD10O75832 226 aa18.03■□□□□ 0.48
CD40-207ENST00000620709 ITGB1P05556 798 aa18.03■□□□□ 0.48
CD40-207ENST00000620709 U2AF2P26368 475 aaKnown RBP eCLIP18.03■□□□□ 0.48
CD40-207ENST00000620709 TBC1D8BQ0IIM8 1120 aa18.03■□□□□ 0.48
CD40-207ENST00000620709 HYAL1Q12794 435 aa18.03■□□□□ 0.48
CD40-207ENST00000620709 GALNT17Q6IS24 598 aa18.03■□□□□ 0.48
CD40-207ENST00000620709 KRT25Q7Z3Z0 450 aa18.03■□□□□ 0.48
CD40-207ENST00000620709 DIS3L2Q8IYB7 885 aaKnown RBP18.03■□□□□ 0.48
CD40-207ENST00000620709 FAM177A1Q8N128 213 aaPredicted RBP18.03■□□□□ 0.48
CD40-207ENST00000620709 DAGLBQ8NCG7 672 aa18.03■□□□□ 0.48
CD40-207ENST00000620709 NEK9Q8TD19 979 aa18.03■□□□□ 0.48
CD40-207ENST00000620709 NLRP7Q8WX94 980 aa18.03■□□□□ 0.48
CD40-207ENST00000620709 SH2D3AQ9BRG2 576 aa18.03■□□□□ 0.48
CD40-207ENST00000620709 PHF20Q9BVI0 1012 aa18.03■□□□□ 0.48
CD40-207ENST00000620709 FOXP1Q9H334 677 aaPredicted RBP18.03■□□□□ 0.48
CD40-207ENST00000620709 BRMS1Q9HCU9 246 aa18.03■□□□□ 0.48
CD40-207ENST00000620709 TMEM150BA6NC51 233 aa18.02■□□□□ 0.47
CD40-207ENST00000620709 GRXCR2A6NFK2 248 aa18.02■□□□□ 0.47
CD40-207ENST00000620709 MARCH6O60337 910 aa18.02■□□□□ 0.47
CD40-207ENST00000620709 FGFR1P11362 822 aa18.02■□□□□ 0.47
CD40-207ENST00000620709 ZSCAN20P17040 1043 aaPredicted RBP18.02■□□□□ 0.47
CD40-207ENST00000620709 DNAJB1P25685 340 aa18.02■□□□□ 0.47
CD40-207ENST00000620709 GTF2F1P35269 517 aaKnown RBP eCLIP18.02■□□□□ 0.47
CD40-207ENST00000620709 PUS10Q3MIT2 529 aaKnown RBP18.02■□□□□ 0.47
CD40-207ENST00000620709 RNF169Q8NCN4 708 aa18.02■□□□□ 0.47
CD40-207ENST00000620709 POF1BQ8WVV4 589 aa18.02■□□□□ 0.47
CD40-207ENST00000620709 P2RX5Q93086 422 aa18.02■□□□□ 0.47
CD40-207ENST00000620709 C1QTNF1Q9BXJ1 281 aa18.02■□□□□ 0.47
CD40-207ENST00000620709 CD320Q9NPF0 282 aa18.02■□□□□ 0.47
CD40-207ENST00000620709 PCDHB12Q9Y5F1 795 aa18.02■□□□□ 0.47
CD40-207ENST00000620709 CYP3A7-CYP3A51PA0A087WV96 503 aa18.01■□□□□ 0.47
CD40-207ENST00000620709 C9IYK1 514 aa18.01■□□□□ 0.47
CD40-207ENST00000620709 M0R2N6 131 aa18.01■□□□□ 0.47
CD40-207ENST00000620709 NCK2O43639 380 aa18.01■□□□□ 0.47
CD40-207ENST00000620709 MBD3O95983 291 aa18.01■□□□□ 0.47
CD40-207ENST00000620709 FGFR4P22455 802 aa18.01■□□□□ 0.47
CD40-207ENST00000620709 CYP3A7P24462 503 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms