RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 ZNF658Q5TYW1 1059 aaPredicted RBP8.89□□□□□ -0.99
CPNE3-209ENST00000620393 MAEAQ7L5Y9 396 aa8.89□□□□□ -0.99
CPNE3-209ENST00000620393 DAW1Q8N136 415 aa8.89□□□□□ -0.99
CPNE3-209ENST00000620393 MYCT1Q8N699 235 aa8.89□□□□□ -0.99
CPNE3-209ENST00000620393 ARRDC4Q8NCT1 418 aa8.89□□□□□ -0.99
CPNE3-209ENST00000620393 SLC7A3Q8WY07 619 aa8.89□□□□□ -0.99
CPNE3-209ENST00000620393 KIFAP3Q92845 792 aa8.89□□□□□ -0.99
CPNE3-209ENST00000620393 DRC1Q96MC2 740 aa8.89□□□□□ -0.99
CPNE3-209ENST00000620393 HS3ST6Q96QI5 342 aa8.89□□□□□ -0.99
CPNE3-209ENST00000620393 KATNAL1Q9BW62 490 aa8.89□□□□□ -0.99
CPNE3-209ENST00000620393 UNC93B1Q9H1C4 597 aa8.89□□□□□ -0.99
CPNE3-209ENST00000620393 TSPY26PQ9H489 355 aa8.89□□□□□ -0.99
CPNE3-209ENST00000620393 ZHX3Q9H4I2 956 aa8.89□□□□□ -0.99
CPNE3-209ENST00000620393 ATP6V0A4Q9HBG4 840 aa8.89□□□□□ -0.99
CPNE3-209ENST00000620393 PARVGQ9HBI0 331 aa8.89□□□□□ -0.99
CPNE3-209ENST00000620393 PAK6Q9NQU5 681 aaPredicted RBP8.89□□□□□ -0.99
CPNE3-209ENST00000620393 XPNPEP1Q9NQW7 623 aa8.89□□□□□ -0.99
CPNE3-209ENST00000620393 EXOC1Q9NV70 894 aa8.89□□□□□ -0.99
CPNE3-209ENST00000620393 KCNG1Q9UIX4 513 aa8.89□□□□□ -0.99
CPNE3-209ENST00000620393 PCDHA2Q9Y5H9 948 aa8.89□□□□□ -0.99
CPNE3-209ENST00000620393 COL1A2P08123 1366 aa8.88□□□□□ -0.99
CPNE3-209ENST00000620393 NRCAMQ92823 1304 aa8.88□□□□□ -0.99
CPNE3-209ENST00000620393 PLXNA1Q9UIW2 1896 aa8.88□□□□□ -0.99
CPNE3-209ENST00000620393 PPP1R3GB7ZBB8 358 aa8.88□□□□□ -0.99
CPNE3-209ENST00000620393 GAS2O43903 313 aaKnown RBP8.88□□□□□ -0.99
CPNE3-209ENST00000620393 TBCAO75347 108 aaKnown RBP8.88□□□□□ -0.99
CPNE3-209ENST00000620393 CABYRO75952 493 aa8.88□□□□□ -0.99
CPNE3-209ENST00000620393 CAVIN2O95810 425 aa8.88□□□□□ -0.99
CPNE3-209ENST00000620393 ASGR1P07306 291 aa8.88□□□□□ -0.99
CPNE3-209ENST00000620393 SMIM10L2AP0DMW4 78 aa8.88□□□□□ -0.99
CPNE3-209ENST00000620393 SMIM10L2BP0DMW5 78 aa8.88□□□□□ -0.99
CPNE3-209ENST00000620393 MAPTP10636 758 aaKnown RBP8.88□□□□□ -0.99
CPNE3-209ENST00000620393 CCL5P13501 91 aa8.88□□□□□ -0.99
CPNE3-209ENST00000620393 PLS3P13797 630 aa8.88□□□□□ -0.99
CPNE3-209ENST00000620393 KLRC1P26715 233 aa8.88□□□□□ -0.99
CPNE3-209ENST00000620393 ARL2P36404 184 aa8.88□□□□□ -0.99
CPNE3-209ENST00000620393 POLGP54098 1239 aaPredicted RBP8.88□□□□□ -0.99
CPNE3-209ENST00000620393 RTP1P59025 263 aa8.88□□□□□ -0.99
CPNE3-209ENST00000620393 TBC1D8BQ0IIM8 1120 aa8.88□□□□□ -0.99
CPNE3-209ENST00000620393 PPFIA1Q13136 1202 aa8.88□□□□□ -0.99
CPNE3-209ENST00000620393 EMC2Q15006 297 aa8.88□□□□□ -0.99
CPNE3-209ENST00000620393 MTFR1Q15390 333 aa8.88□□□□□ -0.99
CPNE3-209ENST00000620393 COBLL1Q53SF7 1204 aa8.88□□□□□ -0.99
CPNE3-209ENST00000620393 FAM102BQ5T8I3 360 aa8.88□□□□□ -0.99
CPNE3-209ENST00000620393 IER5Q5VY09 327 aa8.88□□□□□ -0.99
CPNE3-209ENST00000620393 CXCL17Q6UXB2 119 aa8.88□□□□□ -0.99
CPNE3-209ENST00000620393 TMC2Q8TDI7 906 aa8.88□□□□□ -0.99
CPNE3-209ENST00000620393 TCP11Q8WWU5 503 aa8.88□□□□□ -0.99
CPNE3-209ENST00000620393 HPS3Q969F9 1004 aa8.88□□□□□ -0.99
CPNE3-209ENST00000620393 ARMC5Q96C12 935 aa8.88□□□□□ -0.99
CPNE3-209ENST00000620393 NTPCRQ9BSD7 190 aaKnown RBP8.88□□□□□ -0.99
CPNE3-209ENST00000620393 RNF208Q9H0X6 261 aa8.88□□□□□ -0.99
CPNE3-209ENST00000620393 C17orf75Q9HAS0 396 aa8.88□□□□□ -0.99
CPNE3-209ENST00000620393 SLC39A2Q9NP94 309 aa8.88□□□□□ -0.99
CPNE3-209ENST00000620393 GPRC5CQ9NQ84 441 aa8.88□□□□□ -0.99
CPNE3-209ENST00000620393 PRDM10Q9NQV6 1147 aa8.88□□□□□ -0.99
CPNE3-209ENST00000620393 SETD4Q9NVD3 440 aa8.88□□□□□ -0.99
CPNE3-209ENST00000620393 LARSQ9P2J5 1176 aaKnown RBP8.88□□□□□ -0.99
CPNE3-209ENST00000620393 SEL1LQ9UBV2 794 aa8.88□□□□□ -0.99
CPNE3-209ENST00000620393 MGAMO43451 1857 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 ZSWIM8A7E2V4 1837 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 MCM3APO60318 1980 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 C2orf72A6NCS6 295 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 MOXD2PA6NHM9 499 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 ASAP2O43150 1006 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 C22orf31O95567 290 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 GNAT1P11488 350 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 PPP1R2P41236 205 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 PRCPP42785 496 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 DNM2P50570 870 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 ACLYP53396 1101 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 SOX10P56693 466 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 CHMP4BP1P59074 171 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 IGBP1P78318 339 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 GRIK4Q16099 956 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 NBPF20Q3BBV1 942 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 DPCR1Q3MIW9 517 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 ANO6Q4KMQ2 910 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 FAM26FQ5R3K3 315 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 ODR4Q5SWX8 454 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 MARCH8Q5T0T0 291 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 EFCAB12Q6NXP0 572 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 MTHFD1LQ6UB35 978 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 ZNF720Q7Z2F6 126 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 GAS2L3Q86XJ1 694 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 SFR1Q86XK3 245 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 ADSSL1Q8N142 457 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 RETREG2Q8NC44 543 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 KIAA0895Q8NCT3 520 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 TRAPPC12Q8WVT3 735 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 SPIRE2Q8WWL2 714 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 TMEM143Q96AN5 459 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 ZNF333Q96JL9 665 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 DEFB118Q96PH6 123 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 FIZ1Q96SL8 496 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 NAT10Q9H0A0 1025 aaKnown RBP8.87□□□□□ -0.99
CPNE3-209ENST00000620393 DNAJC25Q9H1X3 360 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 MRPL44Q9H9J2 332 aaKnown RBP8.87□□□□□ -0.99
CPNE3-209ENST00000620393 SUGCTQ9HAC7 445 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 OLFML3Q9NRN5 406 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms