RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 HIP1RO75146 1068 aa14.97□□□□□ -0.01
CNOT3-210ENST00000618939 RFX1P22670 979 aa14.97□□□□□ -0.01
CNOT3-210ENST00000618939 ANXA13P27216 316 aa14.97□□□□□ -0.01
CNOT3-210ENST00000618939 ABCD1P33897 745 aa14.97□□□□□ -0.01
CNOT3-210ENST00000618939 CCDC14Q49A88 953 aa14.97□□□□□ -0.01
CNOT3-210ENST00000618939 WDR93Q6P2C0 686 aa14.97□□□□□ -0.01
CNOT3-210ENST00000618939 NCAPG2Q86XI2 1143 aa14.97□□□□□ -0.01
CNOT3-210ENST00000618939 STMN2Q93045 179 aa14.97□□□□□ -0.01
CNOT3-210ENST00000618939 ANAPC7Q9UJX3 599 aa14.97□□□□□ -0.01
CNOT3-210ENST00000618939 SART1O43290 800 aaKnown RBP14.97□□□□□ -0.01
CNOT3-210ENST00000618939 ADCY2Q08462 1091 aa14.97□□□□□ -0.01
CNOT3-210ENST00000618939 C6orf118Q5T5N4 469 aa14.97□□□□□ -0.01
CNOT3-210ENST00000618939 LDHDQ86WU2 507 aa14.97□□□□□ -0.01
CNOT3-210ENST00000618939 ATP6V1G3Q96LB4 118 aa14.97□□□□□ -0.01
CNOT3-210ENST00000618939 TRIM6Q9C030 488 aaPredicted RBP14.97□□□□□ -0.01
CNOT3-210ENST00000618939 CAPN6Q9Y6Q1 641 aa14.97□□□□□ -0.01
CNOT3-210ENST00000618939 IVNS1ABPQ9Y6Y0 642 aa14.97□□□□□ -0.01
CNOT3-210ENST00000618939 LTN1O94822 1766 aa14.97□□□□□ -0.01
CNOT3-210ENST00000618939 TROVE2P10155 538 aaKnown RBP eCLIP14.96□□□□□ -0.01
CNOT3-210ENST00000618939 NAB2Q15742 525 aa14.96□□□□□ -0.01
CNOT3-210ENST00000618939 ZKSCAN8Q15776 578 aaPredicted RBP14.96□□□□□ -0.01
CNOT3-210ENST00000618939 TADA2BQ86TJ2 420 aa14.96□□□□□ -0.01
CNOT3-210ENST00000618939 SYN2Q92777 582 aaPredicted RBP14.96□□□□□ -0.01
CNOT3-210ENST00000618939 PRR12Q9ULL5 1215 aa14.96□□□□□ -0.01
CNOT3-210ENST00000618939 CLEC11AQ9Y240 323 aa14.96□□□□□ -0.01
CNOT3-210ENST00000618939 DAPK3O43293 454 aa14.96□□□□□ -0.01
CNOT3-210ENST00000618939 CLTAP09496 248 aa14.96□□□□□ -0.01
CNOT3-210ENST00000618939 CYP11B2P19099 503 aa14.96□□□□□ -0.01
CNOT3-210ENST00000618939 GALCP54803 685 aa14.96□□□□□ -0.01
CNOT3-210ENST00000618939 ITIH3Q06033 890 aa14.96□□□□□ -0.01
CNOT3-210ENST00000618939 ADCY1Q08828 1119 aa14.96□□□□□ -0.01
CNOT3-210ENST00000618939 ANKRD20A3Q5VUR7 823 aa14.96□□□□□ -0.01
CNOT3-210ENST00000618939 PAPD7Q5XG87 772 aaKnown RBP14.96□□□□□ -0.01
CNOT3-210ENST00000618939 PPP1R2P3Q6NXS1 205 aa14.96□□□□□ -0.01
CNOT3-210ENST00000618939 SEPT14Q6ZU15 432 aa14.96□□□□□ -0.01
CNOT3-210ENST00000618939 RIOX1Q9H6W3 641 aa14.96□□□□□ -0.01
CNOT3-210ENST00000618939 PSD3Q9NYI0 1048 aa14.96□□□□□ -0.01
CNOT3-210ENST00000618939 CD2APQ9Y5K6 639 aa14.96□□□□□ -0.01
CNOT3-210ENST00000618939 KRT76Q01546 638 aa14.96□□□□□ -0.01
CNOT3-210ENST00000618939 CIAPIN1Q6FI81 312 aa14.96□□□□□ -0.01
CNOT3-210ENST00000618939 PPFIBP2Q8ND30 876 aa14.96□□□□□ -0.01
CNOT3-210ENST00000618939 ARHGEF2Q92974 986 aaKnown RBP14.96□□□□□ -0.01
CNOT3-210ENST00000618939 LRRC10BA6NIK2 292 aa14.96□□□□□ -0.02
CNOT3-210ENST00000618939 K7ERI5 159 aa14.96□□□□□ -0.02
CNOT3-210ENST00000618939 CDK17Q00537 523 aa14.96□□□□□ -0.02
CNOT3-210ENST00000618939 DNAJC24Q6P3W2 148 aa14.96□□□□□ -0.02
CNOT3-210ENST00000618939 SCYL2Q6P3W7 929 aa14.96□□□□□ -0.02
CNOT3-210ENST00000618939 CATSPER3Q86XQ3 398 aa14.96□□□□□ -0.02
CNOT3-210ENST00000618939 PRPF38AQ8NAV1 312 aaKnown RBP14.96□□□□□ -0.02
CNOT3-210ENST00000618939 MCPH1Q8NEM0 835 aa14.96□□□□□ -0.02
CNOT3-210ENST00000618939 MCUR1Q96AQ8 359 aa14.96□□□□□ -0.02
CNOT3-210ENST00000618939 POLLQ9UGP5 575 aa14.96□□□□□ -0.02
CNOT3-210ENST00000618939 FBXL5Q9UKA1 691 aa14.96□□□□□ -0.02
CNOT3-210ENST00000618939 DENND3A2RUS2 1198 aa14.95□□□□□ -0.02
CNOT3-210ENST00000618939 EVI5O60447 810 aa14.95□□□□□ -0.02
CNOT3-210ENST00000618939 ACSL3O95573 720 aa14.95□□□□□ -0.02
CNOT3-210ENST00000618939 MAGOHP61326 146 aaKnown RBP14.95□□□□□ -0.02
CNOT3-210ENST00000618939 CCDC62Q6P9F0 684 aa14.95□□□□□ -0.02
CNOT3-210ENST00000618939 HAUS6Q7Z4H7 955 aa14.95□□□□□ -0.02
CNOT3-210ENST00000618939 ANKS1AQ92625 1134 aa14.95□□□□□ -0.02
CNOT3-210ENST00000618939 RNPC3Q96LT9 517 aaKnown RBP14.95□□□□□ -0.02
CNOT3-210ENST00000618939 PSMD1Q99460 953 aa14.95□□□□□ -0.02
CNOT3-210ENST00000618939 STK33Q9BYT3 514 aa14.95□□□□□ -0.02
CNOT3-210ENST00000618939 DNAJC17Q9NVM6 304 aaKnown RBP14.95□□□□□ -0.02
CNOT3-210ENST00000618939 KRT1P04264 644 aa14.95□□□□□ -0.02
CNOT3-210ENST00000618939 VEGFAP15692 232 aaPredicted RBP14.95□□□□□ -0.02
CNOT3-210ENST00000618939 FMO5P49326 533 aa14.95□□□□□ -0.02
CNOT3-210ENST00000618939 ZNF564Q8TBZ8 553 aaPredicted RBP14.95□□□□□ -0.02
CNOT3-210ENST00000618939 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.95□□□□□ -0.025e-6■□□□□ 9.7
CNOT3-210ENST00000618939 ODF2LQ9ULJ1 636 aa14.95□□□□□ -0.02
CNOT3-210ENST00000618939 GOLGA8SH3BPF8 625 aa14.95□□□□□ -0.02
CNOT3-210ENST00000618939 I3L4J1 428 aa14.95□□□□□ -0.02
CNOT3-210ENST00000618939 SGK1O00141 431 aa14.95□□□□□ -0.02
CNOT3-210ENST00000618939 CYTH3O43739 400 aa14.95□□□□□ -0.02
CNOT3-210ENST00000618939 IL9RQ01113 521 aa14.95□□□□□ -0.02
CNOT3-210ENST00000618939 KRT81Q14533 505 aa14.95□□□□□ -0.02
CNOT3-210ENST00000618939 SH2D3CQ8N5H7 860 aa14.95□□□□□ -0.02
CNOT3-210ENST00000618939 ANKZF1Q9H8Y5 726 aa14.95□□□□□ -0.02
CNOT3-210ENST00000618939 EHD2Q9NZN4 543 aa14.95□□□□□ -0.02
CNOT3-210ENST00000618939 PFASO15067 1338 aa14.95□□□□□ -0.02
CNOT3-210ENST00000618939 STK10O94804 968 aaKnown RBP14.95□□□□□ -0.02
CNOT3-210ENST00000618939 MRC1P22897 1456 aa14.95□□□□□ -0.02
CNOT3-210ENST00000618939 RASSF2P50749 326 aa14.95□□□□□ -0.02
CNOT3-210ENST00000618939 TFAMQ00059 246 aaKnown RBP14.95□□□□□ -0.02
CNOT3-210ENST00000618939 CFAP157Q5JU67 520 aa14.95□□□□□ -0.02
CNOT3-210ENST00000618939 KRT39Q6A163 491 aa14.95□□□□□ -0.02
CNOT3-210ENST00000618939 CASC4Q6P4E1 433 aa14.95□□□□□ -0.02
CNOT3-210ENST00000618939 KIAA0895Q8NCT3 520 aa14.95□□□□□ -0.02
CNOT3-210ENST00000618939 CALR3Q96L12 384 aaKnown RBP14.95□□□□□ -0.02
CNOT3-210ENST00000618939 ARHGAP20Q9P2F6 1191 aa14.95□□□□□ -0.02
CNOT3-210ENST00000618939 TBK1Q9UHD2 729 aa14.95□□□□□ -0.02
CNOT3-210ENST00000618939 A0A087X0T9 212 aa14.94□□□□□ -0.02
CNOT3-210ENST00000618939 INO80B-WBP1J3KQ70 363 aa14.94□□□□□ -0.02
CNOT3-210ENST00000618939 ENTPD3O75355 529 aa14.94□□□□□ -0.02
CNOT3-210ENST00000618939 FAM228BP0C875 321 aa14.94□□□□□ -0.02
CNOT3-210ENST00000618939 CHRNA3P32297 505 aa14.94□□□□□ -0.02
CNOT3-210ENST00000618939 CLNS1AP54105 237 aaKnown RBP14.94□□□□□ -0.02
CNOT3-210ENST00000618939 KSR1Q8IVT5 923 aa14.94□□□□□ -0.02
CNOT3-210ENST00000618939 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.94□□□□□ -0.02
CNOT3-210ENST00000618939 DUSP9Q99956 384 aaKnown RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms