RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 RBM43Q6ZSC3 357 aaKnown RBP15□□□□□ -0.01
CIITA-213ENST00000618327 AMIGO3Q86WK7 504 aa15□□□□□ -0.01
CIITA-213ENST00000618327 SAMD3Q8N6K7 520 aa15□□□□□ -0.01
CIITA-213ENST00000618327 FHDC1Q9C0D6 1143 aaPredicted RBP15□□□□□ -0.01
CIITA-213ENST00000618327 NPM3O75607 178 aaKnown RBP15□□□□□ -0.01
CIITA-213ENST00000618327 TRIM49P0CI25 452 aa15□□□□□ -0.01
CIITA-213ENST00000618327 TRIM49CP0CI26 452 aa15□□□□□ -0.01
CIITA-213ENST00000618327 MRPL4Q9BYD3 311 aaKnown RBP15□□□□□ -0.01
CIITA-213ENST00000618327 FAM204AQ9H8W3 233 aa15□□□□□ -0.01
CIITA-213ENST00000618327 KDM3BQ7LBC6 1761 aa15□□□□□ -0.01
CIITA-213ENST00000618327 PPP1R3GB7ZBB8 358 aa15□□□□□ -0.01
CIITA-213ENST00000618327 NFX1Q12986 1120 aaKnown RBP15□□□□□ -0.01
CIITA-213ENST00000618327 SPOUT1Q5T280 376 aaKnown RBP15□□□□□ -0.01
CIITA-213ENST00000618327 RAB17Q9H0T7 212 aa15□□□□□ -0.01
CIITA-213ENST00000618327 UNC45AQ9H3U1 944 aa15□□□□□ -0.01
CIITA-213ENST00000618327 SYNPO2Q9UMS6 1093 aa15□□□□□ -0.01
CIITA-213ENST00000618327 RNF8O76064 485 aa14.99□□□□□ -0.01
CIITA-213ENST00000618327 PRKCEQ02156 737 aa14.99□□□□□ -0.01
CIITA-213ENST00000618327 PLA2G4FQ68DD2 849 aa14.99□□□□□ -0.01
CIITA-213ENST00000618327 PPP1R2P3Q6NXS1 205 aa14.99□□□□□ -0.01
CIITA-213ENST00000618327 SCYL2Q6P3W7 929 aa14.99□□□□□ -0.01
CIITA-213ENST00000618327 SRGAP1Q7Z6B7 1085 aa14.99□□□□□ -0.01
CIITA-213ENST00000618327 SYT2Q8N9I0 419 aaPredicted RBP14.99□□□□□ -0.01
CIITA-213ENST00000618327 RSRC1Q96IZ7 334 aaKnown RBP14.99□□□□□ -0.01
CIITA-213ENST00000618327 PLS3P13797 630 aa14.99□□□□□ -0.01
CIITA-213ENST00000618327 TNFAIP2Q03169 654 aa14.99□□□□□ -0.01
CIITA-213ENST00000618327 CEP128Q6ZU80 1094 aa14.99□□□□□ -0.01
CIITA-213ENST00000618327 SMC6Q96SB8 1091 aa14.99□□□□□ -0.01
CIITA-213ENST00000618327 JRKLQ9Y4A0 524 aa14.99□□□□□ -0.01
CIITA-213ENST00000618327 TRPM3Q9HCF6 1732 aaPredicted RBP14.99□□□□□ -0.01
CIITA-213ENST00000618327 E7EVH7 732 aa14.99□□□□□ -0.01
CIITA-213ENST00000618327 MED24O75448 989 aa14.99□□□□□ -0.01
CIITA-213ENST00000618327 SLURP2P0DP57 97 aa14.99□□□□□ -0.01
CIITA-213ENST00000618327 MYBP10242 640 aa14.99□□□□□ -0.01
CIITA-213ENST00000618327 ARP10275 920 aa14.99□□□□□ -0.01
CIITA-213ENST00000618327 NAA25Q14CX7 972 aa14.99□□□□□ -0.01
CIITA-213ENST00000618327 Q4G0T1 1027 aa14.99□□□□□ -0.01
CIITA-213ENST00000618327 SCARA5Q6ZMJ2 495 aa14.99□□□□□ -0.01
CIITA-213ENST00000618327 SND1Q7KZF4 910 aaKnown RBP eCLIP14.99□□□□□ -0.01
CIITA-213ENST00000618327 TEX2Q8IWB9 1127 aa14.99□□□□□ -0.01
CIITA-213ENST00000618327 SELENOSQ9BQE4 189 aa14.99□□□□□ -0.01
CIITA-213ENST00000618327 SCN11AQ9UI33 1791 aa14.99□□□□□ -0.01
CIITA-213ENST00000618327 TAL1P17542 331 aaPredicted RBP14.99□□□□□ -0.01
CIITA-213ENST00000618327 MAPK4P31152 587 aa14.99□□□□□ -0.01
CIITA-213ENST00000618327 EDRF1Q3B7T1 1238 aa14.99□□□□□ -0.01
CIITA-213ENST00000618327 KRT39Q6A163 491 aa14.99□□□□□ -0.01
CIITA-213ENST00000618327 ADAT2Q7Z6V5 191 aaKnown RBP14.99□□□□□ -0.01
CIITA-213ENST00000618327 RDM1Q8NG50 284 aa14.99□□□□□ -0.01
CIITA-213ENST00000618327 TMEM143Q96AN5 459 aa14.99□□□□□ -0.01
CIITA-213ENST00000618327 KBTBD4Q9NVX7 518 aa14.99□□□□□ -0.01
CIITA-213ENST00000618327 DDX41Q9UJV9 622 aaKnown RBP14.99□□□□□ -0.01
CIITA-213ENST00000618327 CAPN9O14815 690 aa14.98□□□□□ -0.01
CIITA-213ENST00000618327 EFNA5P52803 228 aa14.98□□□□□ -0.01
CIITA-213ENST00000618327 BRD3Q15059 726 aa14.98□□□□□ -0.01
CIITA-213ENST00000618327 GPD1LQ8N335 351 aa14.98□□□□□ -0.01
CIITA-213ENST00000618327 RNF149Q8NC42 400 aa14.98□□□□□ -0.01
CIITA-213ENST00000618327 SMARCAD1Q9H4L7 1026 aa14.98□□□□□ -0.01
CIITA-213ENST00000618327 FOXP2O15409 715 aa14.98□□□□□ -0.01
CIITA-213ENST00000618327 FTCDO95954 541 aa14.98□□□□□ -0.01
CIITA-213ENST00000618327 ABI1Q8IZP0 508 aa14.98□□□□□ -0.01
CIITA-213ENST00000618327 SYTL5Q8TDW5 730 aaPredicted RBP14.98□□□□□ -0.01
CIITA-213ENST00000618327 TSNARE1Q96NA8 513 aa14.98□□□□□ -0.01
CIITA-213ENST00000618327 STIM2Q9P246 746 aa14.98□□□□□ -0.01
CIITA-213ENST00000618327 AGO2Q9UKV8 859 aaKnown RBP14.98□□□□□ -0.01
CIITA-213ENST00000618327 SLC16A3O15427 465 aaKnown RBP14.98□□□□□ -0.01
CIITA-213ENST00000618327 CYP11B2P19099 503 aa14.98□□□□□ -0.01
CIITA-213ENST00000618327 NR1I3Q14994 352 aa14.98□□□□□ -0.01
CIITA-213ENST00000618327 ZNF667Q5HYK9 610 aa14.98□□□□□ -0.01
CIITA-213ENST00000618327 MFSD14CQ5VZR4 134 aa14.98□□□□□ -0.01
CIITA-213ENST00000618327 PROCA1Q8NCQ7 364 aaPredicted RBP14.98□□□□□ -0.01
CIITA-213ENST00000618327 SCFD2Q8WU76 684 aa14.98□□□□□ -0.01
CIITA-213ENST00000618327 SNX25Q9H3E2 840 aa14.98□□□□□ -0.01
CIITA-213ENST00000618327 CAPN11Q9UMQ6 739 aa14.98□□□□□ -0.01
CIITA-213ENST00000618327 MED7O43513 233 aa14.98□□□□□ -0.01
CIITA-213ENST00000618327 GTF2A2P52657 109 aa14.98□□□□□ -0.01
CIITA-213ENST00000618327 NPEPPSP55786 919 aa14.98□□□□□ -0.01
CIITA-213ENST00000618327 ZNF746Q6NUN9 644 aaPredicted RBP14.98□□□□□ -0.01
CIITA-213ENST00000618327 EDEM3Q9BZQ6 932 aa14.98□□□□□ -0.01
CIITA-213ENST00000618327 INTS2Q9H0H0 1204 aaKnown RBP14.98□□□□□ -0.01
CIITA-213ENST00000618327 ANKEF1Q9NU02 776 aa14.98□□□□□ -0.01
CIITA-213ENST00000618327 GPRC5DQ9NZD1 345 aa14.98□□□□□ -0.01
CIITA-213ENST00000618327 EMSYQ7Z589 1322 aa14.97□□□□□ -0.01
CIITA-213ENST00000618327 NDUFAB1O14561 156 aa14.97□□□□□ -0.01
CIITA-213ENST00000618327 C7orf31Q8N865 590 aa14.97□□□□□ -0.01
CIITA-213ENST00000618327 OR6J1Q8NGC5 347 aa14.97□□□□□ -0.01
CIITA-213ENST00000618327 STK10O94804 968 aaKnown RBP14.97□□□□□ -0.01
CIITA-213ENST00000618327 VEGFAP15692 232 aaPredicted RBP14.97□□□□□ -0.01
CIITA-213ENST00000618327 DSG3P32926 999 aa14.97□□□□□ -0.01
CIITA-213ENST00000618327 ZC2HC1CQ53FD0 456 aaPredicted RBP14.97□□□□□ -0.01
CIITA-213ENST00000618327 NACA2Q9H009 215 aa14.97□□□□□ -0.01
CIITA-213ENST00000618327 SAMD15Q9P1V8 674 aa14.97□□□□□ -0.01
CIITA-213ENST00000618327 GH1P01241 217 aa14.97□□□□□ -0.01
CIITA-213ENST00000618327 NAA35Q5VZE5 725 aa14.97□□□□□ -0.01
CIITA-213ENST00000618327 B4GALNT4Q76KP1 1039 aa14.97□□□□□ -0.01
CIITA-213ENST00000618327 MRPL47Q9HD33 250 aaKnown RBP14.97□□□□□ -0.01
CIITA-213ENST00000618327 TOPORSQ9NS56 1045 aaPredicted RBP14.97□□□□□ -0.01
CIITA-213ENST00000618327 KRT81Q14533 505 aa14.96□□□□□ -0.01
CIITA-213ENST00000618327 DRAP1Q14919 205 aaPredicted RBP14.96□□□□□ -0.01
CIITA-213ENST00000618327 EMC2Q15006 297 aa14.96□□□□□ -0.01
CIITA-213ENST00000618327 RINT1Q6NUQ1 792 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms