RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 SEPT14Q6ZU15 432 aa6.04□□□□□ -1.44
CPNE4-214ENST00000617767 PPFIBP1Q86W92 1011 aa6.04□□□□□ -1.44
CPNE4-214ENST00000617767 CSGALNACT2Q8N6G5 542 aa6.04□□□□□ -1.44
CPNE4-214ENST00000617767 OSBPL10Q9BXB5 764 aa6.04□□□□□ -1.44
CPNE4-214ENST00000617767 ANO3Q9BYT9 981 aa6.04□□□□□ -1.44
CPNE4-214ENST00000617767 IKZF4Q9H2S9 585 aa6.04□□□□□ -1.44
CPNE4-214ENST00000617767 WDR35Q9P2L0 1181 aa6.04□□□□□ -1.44
CPNE4-214ENST00000617767 SERPINA10Q9UK55 444 aa6.04□□□□□ -1.44
CPNE4-214ENST00000617767 GOLGA6L9A6NEM1 432 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 RASSF10A6NK89 507 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 PDLIM1O00151 329 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 HARSP12081 509 aaKnown RBP6.03□□□□□ -1.44
CPNE4-214ENST00000617767 ZNF18P17022 549 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 TRIM21P19474 475 aaKnown RBP6.03□□□□□ -1.44
CPNE4-214ENST00000617767 GGCXP38435 758 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 FXR1P51114 621 aaKnown RBP eCLIP6.03□□□□□ -1.44
CPNE4-214ENST00000617767 PSMC6P62333 389 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 SP4Q02446 784 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 GRB10Q13322 594 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 PDCLQ13371 301 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 NT5DC1Q5TFE4 455 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 ZNF658Q5TYW1 1059 aaPredicted RBP6.03□□□□□ -1.44
CPNE4-214ENST00000617767 ARL6IP4Q66PJ3 421 aaKnown RBP6.03□□□□□ -1.44
CPNE4-214ENST00000617767 TMEM179Q6ZVK1 233 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 NCCRP1Q6ZVX7 275 aaPredicted RBP6.03□□□□□ -1.44
CPNE4-214ENST00000617767 FBXO11Q86XK2 927 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 TRIM50Q86XT4 487 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 PIGOQ8TEQ8 1089 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 HAS1Q92839 578 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 ZNF341Q9BYN7 854 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 TANGO6Q9C0B7 1094 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 DHX36Q9H2U1 1008 aaKnown RBP6.03□□□□□ -1.44
CPNE4-214ENST00000617767 HDAC9Q9UKV0 1011 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 PRR12Q9ULL5 1215 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 SUGT1Q9Y2Z0 365 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.03□□□□□ -1.44
CPNE4-214ENST00000617767 MGRN1O60291 552 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 PEX14O75381 377 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 TPPPO94811 219 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 ATP6V1G2O95670 118 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 MTIF2P46199 727 aaKnown RBP6.03□□□□□ -1.44
CPNE4-214ENST00000617767 PTK7Q13308 1070 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 RCN1Q15293 331 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 PABPC1LQ4VXU2 614 aaKnown RBP6.03□□□□□ -1.44
CPNE4-214ENST00000617767 GPATCH4Q5T3I0 446 aaKnown RBP6.03□□□□□ -1.44
CPNE4-214ENST00000617767 SYDE2Q5VT97 1194 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 ANKRD40Q6AI12 368 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 DPY19L2Q6NUT2 758 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 SV2BQ7L1I2 683 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 TC2NQ8N9U0 490 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 AGBL1Q96MI9 1066 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 PNMA5Q96PV4 448 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 OXCT2Q9BYC2 517 aaPredicted RBP6.03□□□□□ -1.44
CPNE4-214ENST00000617767 TRIM9Q9C026 710 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 RIC8AQ9NPQ8 531 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 TRPV5Q9NQA5 729 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 PIM2Q9P1W9 311 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 FOCADQ5VW36 1801 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 MKI67P46013 3256 aaKnown RBP6.03□□□□□ -1.44
CPNE4-214ENST00000617767 LRRD1A4D1F6 860 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 FAM86B1E9PN63 330 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 POTEB2H3BUK9 544 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 FAM86B2P0C5J1 330 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 SNHG28P0DPA3 235 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 ALDH3A1P30838 453 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 AARSP49588 968 aaKnown RBP eCLIP6.03□□□□□ -1.44
CPNE4-214ENST00000617767 APBA1Q02410 837 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 DYNC1I2Q13409 638 aaKnown RBP6.03□□□□□ -1.44
CPNE4-214ENST00000617767 SPRED3Q2MJR0 410 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 SRGAP1Q7Z6B7 1085 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 SPATS2Q86XZ4 545 aaKnown RBP6.03□□□□□ -1.44
CPNE4-214ENST00000617767 WDR75Q8IWA0 830 aaKnown RBP6.03□□□□□ -1.44
CPNE4-214ENST00000617767 ZBTB8BQ8NAP8 495 aaPredicted RBP6.03□□□□□ -1.44
CPNE4-214ENST00000617767 NLGN2Q8NFZ4 835 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 SPATA20Q8TB22 786 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 LARP4BQ92615 738 aaKnown RBP6.03□□□□□ -1.44
CPNE4-214ENST00000617767 DDX12PQ92771 950 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 CCDC17Q96LX7 622 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 TAOK3Q9H2K8 898 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 MMRN2Q9H8L6 949 aa6.03□□□□□ -1.44
CPNE4-214ENST00000617767 MEIS2O14770 477 aa6.02□□□□□ -1.45
CPNE4-214ENST00000617767 KLRC4O43908 158 aa6.02□□□□□ -1.45
CPNE4-214ENST00000617767 TUBP50607 506 aa6.02□□□□□ -1.45
CPNE4-214ENST00000617767 STAT2P52630 851 aa6.02□□□□□ -1.45
CPNE4-214ENST00000617767 CTTNQ14247 550 aaKnown RBP6.02□□□□□ -1.45
CPNE4-214ENST00000617767 NR1I3Q14994 352 aa6.02□□□□□ -1.45
CPNE4-214ENST00000617767 DALRD3Q5D0E6 543 aaKnown RBP6.02□□□□□ -1.45
CPNE4-214ENST00000617767 TCP11X2Q5H9J9 407 aa6.02□□□□□ -1.45
CPNE4-214ENST00000617767 LCA5Q86VQ0 697 aa6.02□□□□□ -1.45
CPNE4-214ENST00000617767 KSR1Q8IVT5 923 aa6.02□□□□□ -1.45
CPNE4-214ENST00000617767 KIAA0895Q8NCT3 520 aa6.02□□□□□ -1.45
CPNE4-214ENST00000617767 MSANTD4Q8NCY6 345 aa6.02□□□□□ -1.45
CPNE4-214ENST00000617767 OPTNQ96CV9 577 aa6.02□□□□□ -1.45
CPNE4-214ENST00000617767 SRPK1Q96SB4 655 aaKnown RBP6.02□□□□□ -1.45
CPNE4-214ENST00000617767 SLF1Q9BQI6 1058 aa6.02□□□□□ -1.45
CPNE4-214ENST00000617767 AMNQ9BXJ7 453 aa6.02□□□□□ -1.45
CPNE4-214ENST00000617767 IDI2Q9BXS1 227 aa6.02□□□□□ -1.45
CPNE4-214ENST00000617767 FAM207AQ9NSI2 230 aaPredicted RBP6.02□□□□□ -1.45
CPNE4-214ENST00000617767 BLOC1S4Q9NUP1 217 aa6.02□□□□□ -1.45
CPNE4-214ENST00000617767 ATXN10Q9UBB4 475 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms