RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 CEP170P1Q96L14 293 aa19■□□□□ 0.63
PCDHGC3-205ENST00000617641 MKNK1Q9BUB5 465 aa19■□□□□ 0.63
PCDHGC3-205ENST00000617641 CARD6Q9BX69 1037 aa19■□□□□ 0.63
PCDHGC3-205ENST00000617641 LACRTQ9GZZ8 138 aa19■□□□□ 0.63
PCDHGC3-205ENST00000617641 DEF6Q9H4E7 631 aa19■□□□□ 0.63
PCDHGC3-205ENST00000617641 PON1P27169 355 aa18.99■□□□□ 0.63
PCDHGC3-205ENST00000617641 ALCAMQ13740 583 aa18.99■□□□□ 0.63
PCDHGC3-205ENST00000617641 GPR162Q16538 588 aa18.99■□□□□ 0.63
PCDHGC3-205ENST00000617641 SFMBT2Q5VUG0 894 aa18.99■□□□□ 0.63
PCDHGC3-205ENST00000617641 HGSNATQ68CP4 663 aa18.99■□□□□ 0.63
PCDHGC3-205ENST00000617641 CYFIP1Q7L576 1253 aa18.99■□□□□ 0.63
PCDHGC3-205ENST00000617641 OTUD6AQ7L8S5 288 aa18.99■□□□□ 0.63
PCDHGC3-205ENST00000617641 ACCSQ96QU6 501 aa18.99■□□□□ 0.63
PCDHGC3-205ENST00000617641 TXNRD2Q9NNW7 524 aa18.99■□□□□ 0.63
PCDHGC3-205ENST00000617641 FRMD4BQ9Y2L6 1034 aa18.99■□□□□ 0.63
PCDHGC3-205ENST00000617641 ICAM3P32942 547 aa18.99■□□□□ 0.63
PCDHGC3-205ENST00000617641 SOX10P56693 466 aa18.99■□□□□ 0.63
PCDHGC3-205ENST00000617641 PRKCEQ02156 737 aa18.99■□□□□ 0.63
PCDHGC3-205ENST00000617641 SPA17Q15506 151 aa18.99■□□□□ 0.63
PCDHGC3-205ENST00000617641 ARMC9Q7Z3E5 817 aa18.99■□□□□ 0.63
PCDHGC3-205ENST00000617641 NUCKS1Q9H1E3 243 aaKnown RBP18.99■□□□□ 0.63
PCDHGC3-205ENST00000617641 MYO1AQ9UBC5 1043 aa18.99■□□□□ 0.63
PCDHGC3-205ENST00000617641 ARID2Q68CP9 1835 aa18.98■□□□□ 0.63
PCDHGC3-205ENST00000617641 AKR1B10O60218 316 aa18.98■□□□□ 0.63
PCDHGC3-205ENST00000617641 RAPGEF1Q13905 1077 aa18.98■□□□□ 0.63
PCDHGC3-205ENST00000617641 ELF2Q15723 593 aa18.98■□□□□ 0.63
PCDHGC3-205ENST00000617641 TDRD12Q587J7 1177 aaKnown RBP18.98■□□□□ 0.63
PCDHGC3-205ENST00000617641 GBP6Q6ZN66 633 aa18.98■□□□□ 0.63
PCDHGC3-205ENST00000617641 MNS1Q8NEH6 495 aa18.98■□□□□ 0.63
PCDHGC3-205ENST00000617641 ZNF526Q8TF50 670 aaPredicted RBP18.98■□□□□ 0.63
PCDHGC3-205ENST00000617641 SYN2Q92777 582 aaPredicted RBP18.98■□□□□ 0.63
PCDHGC3-205ENST00000617641 PCIF1Q9H4Z3 704 aa18.98■□□□□ 0.63
PCDHGC3-205ENST00000617641 TMEM206Q9H813 350 aa18.98■□□□□ 0.63
PCDHGC3-205ENST00000617641 PLCB1Q9NQ66 1216 aa18.98■□□□□ 0.63
PCDHGC3-205ENST00000617641 SEPT9Q9UHD8 586 aaPredicted RBP18.98■□□□□ 0.63
PCDHGC3-205ENST00000617641 CTAGE9A4FU28 777 aa18.97■□□□□ 0.63
PCDHGC3-205ENST00000617641 EXOC3O60645 756 aa18.97■□□□□ 0.63
PCDHGC3-205ENST00000617641 DKC1O60832 514 aaKnown RBP eCLIP18.97■□□□□ 0.63
PCDHGC3-205ENST00000617641 SUPT20HL2P0C7V6 817 aa18.97■□□□□ 0.63
PCDHGC3-205ENST00000617641 GJA5P36382 358 aa18.97■□□□□ 0.63
PCDHGC3-205ENST00000617641 VAV2P52735 878 aa18.97■□□□□ 0.63
PCDHGC3-205ENST00000617641 NCKAP1LP55160 1127 aa18.97■□□□□ 0.63
PCDHGC3-205ENST00000617641 GTF2BQ00403 316 aa18.97■□□□□ 0.63
PCDHGC3-205ENST00000617641 KLHDC7AQ5VTJ3 777 aa18.97■□□□□ 0.63
PCDHGC3-205ENST00000617641 MIS18BP1Q6P0N0 1132 aa18.97■□□□□ 0.63
PCDHGC3-205ENST00000617641 ZNF662Q6ZS27 426 aa18.97■□□□□ 0.63
PCDHGC3-205ENST00000617641 SLC9A9Q8IVB4 645 aa18.97■□□□□ 0.63
PCDHGC3-205ENST00000617641 RDH13Q8NBN7 331 aa18.97■□□□□ 0.63
PCDHGC3-205ENST00000617641 KIFC3Q9BVG8 833 aa18.97■□□□□ 0.63
PCDHGC3-205ENST00000617641 GCNT4Q9P109 453 aa18.97■□□□□ 0.63
PCDHGC3-205ENST00000617641 ARID5AQ03989 594 aa18.97■□□□□ 0.63
PCDHGC3-205ENST00000617641 ASTE1Q2TB18 679 aaPredicted RBP18.97■□□□□ 0.63
PCDHGC3-205ENST00000617641 FAM133AQ8N9E0 248 aa18.97■□□□□ 0.63
PCDHGC3-205ENST00000617641 BSNDQ8WZ55 320 aa18.97■□□□□ 0.63
PCDHGC3-205ENST00000617641 ST6GALNAC4Q9H4F1 302 aa18.97■□□□□ 0.63
PCDHGC3-205ENST00000617641 RBPJLQ9UBG7 517 aa18.97■□□□□ 0.63
PCDHGC3-205ENST00000617641 FHOD1Q9Y613 1164 aa18.97■□□□□ 0.63
PCDHGC3-205ENST00000617641 DUSP10Q9Y6W6 482 aa18.97■□□□□ 0.63
PCDHGC3-205ENST00000617641 CCDC169A6NNP5 214 aa18.96■□□□□ 0.63
PCDHGC3-205ENST00000617641 KRT86O43790 486 aa18.96■□□□□ 0.63
PCDHGC3-205ENST00000617641 TRIM49P0CI25 452 aa18.96■□□□□ 0.63
PCDHGC3-205ENST00000617641 TRIM49CP0CI26 452 aa18.96■□□□□ 0.63
PCDHGC3-205ENST00000617641 UCHL3P15374 230 aa18.96■□□□□ 0.63
PCDHGC3-205ENST00000617641 EDNRBP24530 442 aa18.96■□□□□ 0.63
PCDHGC3-205ENST00000617641 MAPK8IP2Q13387 824 aaPredicted RBP18.96■□□□□ 0.63
PCDHGC3-205ENST00000617641 Q3C1V9 767 aa18.96■□□□□ 0.63
PCDHGC3-205ENST00000617641 GPAT2Q6NUI2 795 aa18.96■□□□□ 0.63
PCDHGC3-205ENST00000617641 NAPGQ99747 312 aaPredicted RBP18.96■□□□□ 0.63
PCDHGC3-205ENST00000617641 CBWD1Q9BRT8 395 aa18.96■□□□□ 0.63
PCDHGC3-205ENST00000617641 IFIH1Q9BYX4 1025 aaKnown RBP18.96■□□□□ 0.63
PCDHGC3-205ENST00000617641 SIX2Q9NPC8 291 aa18.96■□□□□ 0.63
PCDHGC3-205ENST00000617641 PCDHA13Q9Y5I0 950 aa18.96■□□□□ 0.63
PCDHGC3-205ENST00000617641 IGSF9BQ9UPX0 1349 aa18.96■□□□□ 0.63
PCDHGC3-205ENST00000617641 SSU72P8A0A1W2PR75 194 aa18.96■□□□□ 0.63
PCDHGC3-205ENST00000617641 LCA5LO95447 670 aa18.96■□□□□ 0.63
PCDHGC3-205ENST00000617641 SERPING1P05155 500 aa18.96■□□□□ 0.63
PCDHGC3-205ENST00000617641 NPTX2P47972 431 aa18.96■□□□□ 0.63
PCDHGC3-205ENST00000617641 ERCC6LQ2NKX8 1250 aa18.96■□□□□ 0.63
PCDHGC3-205ENST00000617641 SLC9C1Q4G0N8 1177 aa18.96■□□□□ 0.63
PCDHGC3-205ENST00000617641 SYNGAP1Q96PV0 1343 aa18.95■□□□□ 0.62
PCDHGC3-205ENST00000617641 SCN4AP35499 1836 aa18.95■□□□□ 0.62
PCDHGC3-205ENST00000617641 PGK2P07205 417 aa18.95■□□□□ 0.62
PCDHGC3-205ENST00000617641 POTEJP0CG39 1038 aa18.95■□□□□ 0.62
PCDHGC3-205ENST00000617641 UBA1P22314 1058 aaKnown RBP18.95■□□□□ 0.62
PCDHGC3-205ENST00000617641 FMO5P49326 533 aa18.95■□□□□ 0.62
PCDHGC3-205ENST00000617641 GFPT1Q06210 699 aaPredicted RBP18.95■□□□□ 0.62
PCDHGC3-205ENST00000617641 DMP1Q13316 513 aaPredicted RBP18.95■□□□□ 0.62
PCDHGC3-205ENST00000617641 ENOX2Q16206 610 aaKnown RBP18.95■□□□□ 0.62
PCDHGC3-205ENST00000617641 FASTKD5Q7L8L6 764 aaKnown RBP18.95■□□□□ 0.62
PCDHGC3-205ENST00000617641 TMEM161BQ8NDZ6 487 aa18.95■□□□□ 0.62
PCDHGC3-205ENST00000617641 CYP26B1Q9NR63 512 aa18.95■□□□□ 0.62
PCDHGC3-205ENST00000617641 AJAP1Q9UKB5 411 aaPredicted RBP18.95■□□□□ 0.62
PCDHGC3-205ENST00000617641 GTPBP10A4D1E9 387 aaKnown RBP18.95■□□□□ 0.62
PCDHGC3-205ENST00000617641 IQCA1LA6NCM1 817 aa18.95■□□□□ 0.62
PCDHGC3-205ENST00000617641 TADA3O75528 432 aa18.95■□□□□ 0.62
PCDHGC3-205ENST00000617641 SLC25A27O95847 323 aa18.95■□□□□ 0.62
PCDHGC3-205ENST00000617641 MYBPC2Q14324 1141 aa18.95■□□□□ 0.62
PCDHGC3-205ENST00000617641 ASIC2Q16515 512 aa18.95■□□□□ 0.62
PCDHGC3-205ENST00000617641 CBWD6Q4V339 395 aa18.95■□□□□ 0.62
PCDHGC3-205ENST00000617641 CBWD3Q5JTY5 395 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms