RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 SLC9C1Q4G0N8 1177 aa15.76■□□□□ 0.11
SHROOM1-208ENST00000617339 PHLDB2Q86SQ0 1253 aa15.76■□□□□ 0.11
SHROOM1-208ENST00000617339 GMCL1P1Q8NEA9 526 aa15.76■□□□□ 0.11
SHROOM1-208ENST00000617339 ATP9AO75110 1047 aa15.75■□□□□ 0.11
SHROOM1-208ENST00000617339 ZBED4O75132 1171 aa15.75■□□□□ 0.11
SHROOM1-208ENST00000617339 RPS6P62753 249 aaKnown RBP15.75■□□□□ 0.11
SHROOM1-208ENST00000617339 FAM102BQ5T8I3 360 aa15.75■□□□□ 0.11
SHROOM1-208ENST00000617339 CNPY4Q8N129 248 aa15.75■□□□□ 0.11
SHROOM1-208ENST00000617339 RMDN3Q96TC7 470 aa15.75■□□□□ 0.11
SHROOM1-208ENST00000617339 RPAP3Q9H6T3 665 aaPredicted RBP15.75■□□□□ 0.11
SHROOM1-208ENST00000617339 PLIN4Q96Q06 1357 aa15.75■□□□□ 0.11
SHROOM1-208ENST00000617339 K7ENM7 598 aa15.75■□□□□ 0.11
SHROOM1-208ENST00000617339 TACC1O75410 805 aa15.75■□□□□ 0.11
SHROOM1-208ENST00000617339 NF2P35240 595 aa15.75■□□□□ 0.11
SHROOM1-208ENST00000617339 PRPF4BQ13523 1007 aaKnown RBP15.75■□□□□ 0.11
SHROOM1-208ENST00000617339 OPA1O60313 960 aa15.75■□□□□ 0.11
SHROOM1-208ENST00000617339 NNTQ13423 1086 aa15.75■□□□□ 0.11
SHROOM1-208ENST00000617339 SYT2Q8N9I0 419 aaPredicted RBP15.75■□□□□ 0.11
SHROOM1-208ENST00000617339 GLT8D2Q9H1C3 349 aa15.75■□□□□ 0.11
SHROOM1-208ENST00000617339 PPANQ9NQ55 473 aaKnown RBP15.75■□□□□ 0.11
SHROOM1-208ENST00000617339 GCNT4Q9P109 453 aa15.75■□□□□ 0.11
SHROOM1-208ENST00000617339 LY75O60449 1722 aa15.74■□□□□ 0.11
SHROOM1-208ENST00000617339 DDNO94850 711 aaPredicted RBP15.74■□□□□ 0.11
SHROOM1-208ENST00000617339 MKRN4PQ13434 485 aaPredicted RBP15.74■□□□□ 0.11
SHROOM1-208ENST00000617339 ARHGEF16Q5VV41 709 aa15.74■□□□□ 0.11
SHROOM1-208ENST00000617339 RPAINQ86UA6 219 aa15.74■□□□□ 0.11
SHROOM1-208ENST00000617339 NLGN2Q8NFZ4 835 aa15.74■□□□□ 0.11
SHROOM1-208ENST00000617339 DCPSQ96C86 337 aaKnown RBP15.74■□□□□ 0.11
SHROOM1-208ENST00000617339 ERGIC2Q96RQ1 377 aa15.74■□□□□ 0.11
SHROOM1-208ENST00000617339 ACP6Q9NPH0 428 aa15.74■□□□□ 0.11
SHROOM1-208ENST00000617339 PLAGL2Q9UPG8 496 aa15.74■□□□□ 0.11
SHROOM1-208ENST00000617339 CNTNAP1P78357 1384 aa15.74■□□□□ 0.11
SHROOM1-208ENST00000617339 TMEM110-MUSTN1A8MSY1 372 aa15.74■□□□□ 0.11
SHROOM1-208ENST00000617339 BAATQ14032 418 aaPredicted RBP15.74■□□□□ 0.11
SHROOM1-208ENST00000617339 NAA35Q5VZE5 725 aa15.74■□□□□ 0.11
SHROOM1-208ENST00000617339 B4GALNT4Q76KP1 1039 aa15.74■□□□□ 0.11
SHROOM1-208ENST00000617339 TTYH3Q9C0H2 523 aa15.74■□□□□ 0.11
SHROOM1-208ENST00000617339 GINS2Q9Y248 185 aa15.74■□□□□ 0.11
SHROOM1-208ENST00000617339 CSADQ9Y600 493 aa15.74■□□□□ 0.11
SHROOM1-208ENST00000617339 TLR2O60603 784 aa15.74■□□□□ 0.11
SHROOM1-208ENST00000617339 EPB41P11171 864 aaKnown RBP15.74■□□□□ 0.11
SHROOM1-208ENST00000617339 HOXD13P35453 343 aa15.74■□□□□ 0.11
SHROOM1-208ENST00000617339 NT5C2P49902 561 aa15.74■□□□□ 0.11
SHROOM1-208ENST00000617339 PEX3P56589 373 aa15.74■□□□□ 0.11
SHROOM1-208ENST00000617339 PSMD2Q13200 908 aa15.74■□□□□ 0.11
SHROOM1-208ENST00000617339 ASIC2Q16515 512 aa15.74■□□□□ 0.11
SHROOM1-208ENST00000617339 XKR9Q5GH70 373 aa15.74■□□□□ 0.11
SHROOM1-208ENST00000617339 NCAPG2Q86XI2 1143 aa15.74■□□□□ 0.11
SHROOM1-208ENST00000617339 PRPF38AQ8NAV1 312 aaKnown RBP15.74■□□□□ 0.11
SHROOM1-208ENST00000617339 U2AF1L4Q8WU68 220 aaKnown RBP15.74■□□□□ 0.11
SHROOM1-208ENST00000617339 RNPC3Q96LT9 517 aaKnown RBP15.74■□□□□ 0.11
SHROOM1-208ENST00000617339 FAM20AQ96MK3 541 aa15.74■□□□□ 0.11
SHROOM1-208ENST00000617339 PARVGQ9HBI0 331 aa15.74■□□□□ 0.11
SHROOM1-208ENST00000617339 VAV3Q9UKW4 847 aa15.74■□□□□ 0.11
SHROOM1-208ENST00000617339 GOLGA8KD6RF30 607 aa15.73■□□□□ 0.11
SHROOM1-208ENST00000617339 SLC16A4O15374 487 aa15.73■□□□□ 0.11
SHROOM1-208ENST00000617339 MEFVO15553 781 aaPredicted RBP15.73■□□□□ 0.11
SHROOM1-208ENST00000617339 HIP1RO75146 1068 aa15.73■□□□□ 0.11
SHROOM1-208ENST00000617339 CDR1P51861 262 aa15.73■□□□□ 0.11
SHROOM1-208ENST00000617339 VAV2P52735 878 aa15.73■□□□□ 0.11
SHROOM1-208ENST00000617339 HS2ST1Q7LGA3 356 aa15.73■□□□□ 0.11
SHROOM1-208ENST00000617339 KLHL7Q8IXQ5 586 aa15.73■□□□□ 0.11
SHROOM1-208ENST00000617339 BICD1Q96G01 975 aa15.73■□□□□ 0.11
SHROOM1-208ENST00000617339 TEKT3Q9BXF9 490 aa15.73■□□□□ 0.11
SHROOM1-208ENST00000617339 DNAH12Q6ZR08 3092 aa15.73■□□□□ 0.11
SHROOM1-208ENST00000617339 E7EVH7 732 aa15.73■□□□□ 0.11
SHROOM1-208ENST00000617339 NEBLO76041 1014 aa15.73■□□□□ 0.11
SHROOM1-208ENST00000617339 CALCAP01258 141 aa15.73■□□□□ 0.11
SHROOM1-208ENST00000617339 KLRC1P26715 233 aa15.73■□□□□ 0.11
SHROOM1-208ENST00000617339 SSTR3P32745 418 aaPredicted RBP15.73■□□□□ 0.11
SHROOM1-208ENST00000617339 FAM186BQ8IYM0 893 aa15.73■□□□□ 0.11
SHROOM1-208ENST00000617339 ANKRD35Q8N283 1001 aa15.73■□□□□ 0.11
SHROOM1-208ENST00000617339 MTFR1LQ9H019 292 aa15.73■□□□□ 0.11
SHROOM1-208ENST00000617339 LAMB1P07942 1786 aa15.73■□□□□ 0.11
SHROOM1-208ENST00000617339 IGLV3-22A0A075B6J6 115 aa15.73■□□□□ 0.11
SHROOM1-208ENST00000617339 RPSAP08865 295 aaKnown RBP15.73■□□□□ 0.11
SHROOM1-208ENST00000617339 GCLMP48507 274 aa15.73■□□□□ 0.11
SHROOM1-208ENST00000617339 PRELPP51888 382 aa15.73■□□□□ 0.11
SHROOM1-208ENST00000617339 MTMR1Q13613 665 aa15.73■□□□□ 0.11
SHROOM1-208ENST00000617339 DCAF15Q66K64 600 aa15.73■□□□□ 0.11
SHROOM1-208ENST00000617339 ZNF746Q6NUN9 644 aaPredicted RBP15.73■□□□□ 0.11
SHROOM1-208ENST00000617339 PDXDC1Q6P996 788 aa15.73■□□□□ 0.11
SHROOM1-208ENST00000617339 PADI6Q6TGC4 694 aa15.73■□□□□ 0.11
SHROOM1-208ENST00000617339 CNKSR2Q8WXI2 1034 aa15.73■□□□□ 0.11
SHROOM1-208ENST00000617339 SAAL1Q96ER3 474 aa15.73■□□□□ 0.11
SHROOM1-208ENST00000617339 CCDC114Q96M63 670 aa15.73■□□□□ 0.11
SHROOM1-208ENST00000617339 ZIM3Q96PE6 472 aa15.73■□□□□ 0.11
SHROOM1-208ENST00000617339 ODF2LQ9ULJ1 636 aa15.73■□□□□ 0.11
SHROOM1-208ENST00000617339 MYH7BA7E2Y1 1941 aa15.72■□□□□ 0.11
SHROOM1-208ENST00000617339 TARSL2A2RTX5 802 aaKnown RBP15.72■□□□□ 0.11
SHROOM1-208ENST00000617339 ZSCAN5CA6NGD5 496 aaPredicted RBP15.72■□□□□ 0.11
SHROOM1-208ENST00000617339 PALMO75781 387 aa15.72■□□□□ 0.11
SHROOM1-208ENST00000617339 PTK2Q05397 1052 aa15.72■□□□□ 0.11
SHROOM1-208ENST00000617339 ZFYVE27Q5T4F4 411 aa15.72■□□□□ 0.11
SHROOM1-208ENST00000617339 LMBRD2Q68DH5 695 aaPredicted RBP15.72■□□□□ 0.11
SHROOM1-208ENST00000617339 AENQ8WTP8 325 aaKnown RBP15.72■□□□□ 0.11
SHROOM1-208ENST00000617339 KCTD10Q9H3F6 313 aa15.72■□□□□ 0.11
SHROOM1-208ENST00000617339 MYH10P35580 1976 aa15.72■□□□□ 0.11
SHROOM1-208ENST00000617339 NOL4O94818 638 aa15.72■□□□□ 0.11
SHROOM1-208ENST00000617339 CEP85LQ5SZL2 805 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms