RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 TSKSQ9UJT2 592 aa10.94□□□□□ -0.66
SMARCA1-205ENST00000617310 LDHAP00338 332 aaKnown RBP10.93□□□□□ -0.66
SMARCA1-205ENST00000617310 KRT1P04264 644 aa10.93□□□□□ -0.66
SMARCA1-205ENST00000617310 CYP2C9P11712 490 aa10.93□□□□□ -0.66
SMARCA1-205ENST00000617310 TCP1P17987 556 aaKnown RBP10.93□□□□□ -0.66
SMARCA1-205ENST00000617310 STK4Q13043 487 aa10.93□□□□□ -0.66
SMARCA1-205ENST00000617310 MICALCLQ6ZW33 695 aa10.93□□□□□ -0.66
SMARCA1-205ENST00000617310 DCLK2Q8N568 766 aa10.93□□□□□ -0.66
SMARCA1-205ENST00000617310 CCDC110Q8TBZ0 833 aa10.93□□□□□ -0.66
SMARCA1-205ENST00000617310 REEP2Q9BRK0 252 aa10.93□□□□□ -0.66
SMARCA1-205ENST00000617310 ADAM22Q9P0K1 906 aa10.93□□□□□ -0.66
SMARCA1-205ENST00000617310 URB1O60287 2271 aaKnown RBP10.93□□□□□ -0.66
SMARCA1-205ENST00000617310 EMSYQ7Z589 1322 aa10.93□□□□□ -0.66
SMARCA1-205ENST00000617310 PVALEFA0A1B0GWK0 134 aa10.93□□□□□ -0.66
SMARCA1-205ENST00000617310 SGK1O00141 431 aa10.93□□□□□ -0.66
SMARCA1-205ENST00000617310 PRKCBP05771 671 aa10.93□□□□□ -0.66
SMARCA1-205ENST00000617310 CIITAP33076 1130 aa10.93□□□□□ -0.66
SMARCA1-205ENST00000617310 VAMP7P51809 220 aa10.93□□□□□ -0.66
SMARCA1-205ENST00000617310 SEZ6Q53EL9 994 aa10.93□□□□□ -0.66
SMARCA1-205ENST00000617310 METTL16Q86W50 562 aaKnown RBP10.93□□□□□ -0.66
SMARCA1-205ENST00000617310 VSTM4Q8IW00 320 aa10.93□□□□□ -0.66
SMARCA1-205ENST00000617310 NEK9Q8TD19 979 aa10.93□□□□□ -0.66
SMARCA1-205ENST00000617310 MAD2L2Q9UI95 211 aa10.93□□□□□ -0.66
SMARCA1-205ENST00000617310 BZW2Q9Y6E2 419 aaKnown RBP10.93□□□□□ -0.66
SMARCA1-205ENST00000617310 SLIT1O75093 1534 aa10.93□□□□□ -0.66
SMARCA1-205ENST00000617310 GIPC1O14908 333 aa10.93□□□□□ -0.66
SMARCA1-205ENST00000617310 EYA4O95677 639 aa10.93□□□□□ -0.66
SMARCA1-205ENST00000617310 XPAP23025 273 aaPredicted RBP10.93□□□□□ -0.66
SMARCA1-205ENST00000617310 ANXA13P27216 316 aa10.93□□□□□ -0.66
SMARCA1-205ENST00000617310 ADORA2BP29275 332 aa10.93□□□□□ -0.66
SMARCA1-205ENST00000617310 CYP4F22Q6NT55 531 aa10.93□□□□□ -0.66
SMARCA1-205ENST00000617310 APOBEC3HQ6NTF7 200 aaKnown RBP10.93□□□□□ -0.66
SMARCA1-205ENST00000617310 RWDD4Q6NW29 188 aaKnown RBP10.93□□□□□ -0.66
SMARCA1-205ENST00000617310 SMC1BQ8NDV3 1235 aa10.93□□□□□ -0.66
SMARCA1-205ENST00000617310 FAM76AQ8TAV0 307 aa10.93□□□□□ -0.66
SMARCA1-205ENST00000617310 NSRP1Q9H0G5 558 aaKnown RBP10.93□□□□□ -0.66
SMARCA1-205ENST00000617310 TYW1Q9NV66 732 aaKnown RBP10.93□□□□□ -0.66
SMARCA1-205ENST00000617310 CAMTA1Q9Y6Y1 1673 aa10.93□□□□□ -0.66
SMARCA1-205ENST00000617310 GOLGA6CA6NDK9 693 aa10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 GOLGA6BA6NDN3 693 aa10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 SLC37A4O43826 429 aa10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 TRPA1O75762 1119 aa10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 GH1P01241 217 aa10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 GOLGA6DP0CG33 693 aa10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 IL1R1P14778 569 aa10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 ALCAMQ13740 583 aa10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 GOLGA6AQ9NYA3 693 aa10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 PCSK1NQ9UHG2 260 aa10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 TYW5A2RUC4 315 aaKnown RBP10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 MYMKA6NI61 221 aa10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 NDUFA10O95299 355 aa10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 MOCS2O96007 188 aaPredicted RBP10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 ACTN1P12814 892 aa10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 CPB1P15086 417 aa10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 GPC3P51654 580 aa10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 YWHAGP61981 247 aaKnown RBP eCLIP10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 PPP1R13LQ8WUF5 828 aa10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 ZMYND12Q9H0C1 365 aa10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 GPRC5CQ9NQ84 441 aa10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 PFDN4Q9NQP4 134 aa10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 CPSF3Q9UKF6 684 aaKnown RBP10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 NRXN3Q9Y4C0 1643 aa10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 LRRC53A6NM62 1247 aa10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 KBTBD13C9JR72 458 aa10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 DGAT1O75907 488 aa10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 SURF1Q15526 300 aa10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 PPP4R3CPQ6ZMV5 832 aa10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 CERS5Q8N5B7 392 aa10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 BEST2Q8NFU1 509 aa10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 GLT1D1Q96MS3 346 aa10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 MXRA8Q9BRK3 442 aa10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 TARS2Q9BW92 718 aaKnown RBP10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 HEMGNQ9BXL5 484 aa10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 PDGFDQ9GZP0 370 aaPredicted RBP10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 A8MXQ7 604 aa10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 IVLP07476 585 aa10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 SHMT1P34896 483 aa10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 ARL4AP40617 200 aa10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 NLRP11P59045 1033 aaKnown RBP10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 PDZD4Q76G19 769 aaPredicted RBP10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 DNAAF3Q8N9W5 541 aa10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 CCT6BQ92526 530 aa10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 CDCA5Q96FF9 252 aa10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 SMARCAD1Q9H4L7 1026 aa10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 ANAPC7Q9UJX3 599 aa10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 PRG3Q9Y2Y8 225 aaPredicted RBP10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 SNX9Q9Y5X1 595 aa10.92□□□□□ -0.66
SMARCA1-205ENST00000617310 PRPSAP2O60256 369 aa10.91□□□□□ -0.66
SMARCA1-205ENST00000617310 SLC25A27O95847 323 aa10.91□□□□□ -0.66
SMARCA1-205ENST00000617310 TUBBP07437 444 aa10.91□□□□□ -0.66
SMARCA1-205ENST00000617310 HOXA10P31260 410 aaPredicted RBP10.91□□□□□ -0.66
SMARCA1-205ENST00000617310 BASP1P80723 227 aaKnown RBP10.91□□□□□ -0.66
SMARCA1-205ENST00000617310 ANKRD40Q6AI12 368 aa10.91□□□□□ -0.66
SMARCA1-205ENST00000617310 GUF1Q8N442 669 aaKnown RBP10.91□□□□□ -0.66
SMARCA1-205ENST00000617310 HSPH1Q92598 858 aa10.91□□□□□ -0.66
SMARCA1-205ENST00000617310 PPP1R13BQ96KQ4 1090 aa10.91□□□□□ -0.66
SMARCA1-205ENST00000617310 RAB17Q9H0T7 212 aa10.91□□□□□ -0.66
SMARCA1-205ENST00000617310 PXDNLA1KZ92 1463 aa10.91□□□□□ -0.66
SMARCA1-205ENST00000617310 F5H423 210 aaPredicted RBP10.91□□□□□ -0.66
SMARCA1-205ENST00000617310 MED7O43513 233 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms