RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 SUGCTQ9HAC7 445 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 TAF1P21675 1872 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 KIF5CO60282 957 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 TMEM132DQ14C87 1099 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 HSP90B2PQ58FF3 399 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 TTC23Q5W5X9 447 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 SCN4BQ8IWT1 228 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 EHBP1Q8NDI1 1231 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 OSBPL9Q96SU4 736 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 VTA1Q9NP79 307 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 SERPINA10Q9UK55 444 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 RPAP1Q9BWH6 1393 aaPredicted RBP3.62□□□□□ -1.83
LPP-220ENST00000617246 BAIAP3O94812 1187 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 OCM2P0CE71 109 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 OCMP0CE72 109 aaPredicted RBP3.62□□□□□ -1.83
LPP-220ENST00000617246 COG2Q14746 738 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 TMED2Q15363 201 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 C6orf118Q5T5N4 469 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 USP38Q8NB14 1042 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 MAIP1Q8WWC4 291 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 ASAH2Q9NR71 780 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 DDTLA6NHG4 134 aaPredicted RBP3.62□□□□□ -1.83
LPP-220ENST00000617246 EYA2O00167 538 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 LZTS3O60299 673 aaPredicted RBP3.62□□□□□ -1.83
LPP-220ENST00000617246 LRCH4O75427 683 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 PAMP19021 973 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 TSTA3Q13630 321 aaPredicted RBP3.62□□□□□ -1.83
LPP-220ENST00000617246 KRT81Q14533 505 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 SMARCAD1Q9H4L7 1026 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 RPAP3Q9H6T3 665 aaPredicted RBP3.62□□□□□ -1.83
LPP-220ENST00000617246 SLC13A4Q9UKG4 626 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 ODC1P11926 461 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 HCLS1P14317 486 aaPredicted RBP3.62□□□□□ -1.83
LPP-220ENST00000617246 GALNT17Q6IS24 598 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 DEFB118Q96PH6 123 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 TMEM206Q9H813 350 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 MRPL17Q9NRX2 175 aaKnown RBP3.62□□□□□ -1.83
LPP-220ENST00000617246 PDRG1Q9NUG6 133 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 VPS51Q9UID3 782 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 PXDNQ92626 1479 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 A0A0J9YVX5 310 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 HNRNPDLO14979 420 aaKnown RBP3.62□□□□□ -1.83
LPP-220ENST00000617246 CD19P15391 556 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 GCFC2P16383 781 aaKnown RBP3.62□□□□□ -1.83
LPP-220ENST00000617246 PDIA3P30101 505 aaKnown RBP3.62□□□□□ -1.83
LPP-220ENST00000617246 RPS6KA2Q15349 733 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 DCAF4L1Q3SXM0 396 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 JAMLQ86YT9 394 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 MCPH1Q8NEM0 835 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 PIGBQ92521 554 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 MTUS1Q9ULD2 1270 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 PPP1R9AQ9ULJ8 1098 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 CHD5Q8TDI0 1954 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 MYO16Q9Y6X6 1858 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 KRT3P12035 628 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 LRCH2Q5VUJ6 765 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 CWC27Q6UX04 472 aaKnown RBP3.62□□□□□ -1.83
LPP-220ENST00000617246 CCDC170Q8IYT3 715 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 SPATA33Q96N06 139 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 NAP1L5Q96NT1 182 aaPredicted RBP3.62□□□□□ -1.83
LPP-220ENST00000617246 ERAP1Q9NZ08 941 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 APOBEC2Q9Y235 224 aaKnown RBP3.62□□□□□ -1.83
LPP-220ENST00000617246 PATJQ8NI35 1801 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 KIF3CO14782 793 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 HSF2BPO75031 334 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 GUCY2CP25092 1073 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 GRK3P35626 688 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 CCINQ13939 588 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 ZCCHC2Q9C0B9 1178 aaKnown RBP3.62□□□□□ -1.83
LPP-220ENST00000617246 STAP1Q9ULZ2 295 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 STK36Q9NRP7 1315 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 GCNT3O95395 438 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 ASMTLO95671 621 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 SERPINB6P35237 376 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 DEFB128Q7Z7B8 93 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.62□□□□□ -1.83
LPP-220ENST00000617246 CDH7Q9ULB5 785 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 DNM3Q9UQ16 869 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 BNIP3LO60238 219 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 CCNT1O60563 726 aaKnown RBP3.62□□□□□ -1.83
LPP-220ENST00000617246 MBD4O95243 580 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 RPN2P04844 631 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 ERCC6LQ2NKX8 1250 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 SKOR2Q2VWA4 1001 aaPredicted RBP3.62□□□□□ -1.83
LPP-220ENST00000617246 DCAF6Q58WW2 860 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 SYDE2Q5VT97 1194 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 MAP7D3Q8IWC1 876 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 FAM151AQ8WW52 585 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 COL5A3P25940 1745 aaPredicted RBP3.62□□□□□ -1.83
LPP-220ENST00000617246 MTA2O94776 668 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 JAK1P23458 1154 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 NOS2P35228 1153 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 HALP42357 657 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 CUL1Q13616 776 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 NAA25Q14CX7 972 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 IFT43Q96FT9 208 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 DDNO94850 711 aaPredicted RBP3.61□□□□□ -1.83
LPP-220ENST00000617246 MBD3O95983 291 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 CPLX4Q7Z7G2 160 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 SELENONQ9NZV5 590 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms