RNA–Protein interactions for RNA: ENST00000616614.4

FMR1-216, Transcript of fragile X mental retardation 1, humanhuman

TSL 5

Gene FMR1, Length 1,409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-216ENST00000616614 RHPN2Q8IUC4 686 aa35.43■■■■□ 3.26
FMR1-216ENST00000616614 PRPF31Q8WWY3 499 aaKnown RBP35.43■■■■□ 3.26
FMR1-216ENST00000616614 IFIH1Q9BYX4 1025 aaKnown RBP35.43■■■■□ 3.26
FMR1-216ENST00000616614 CCSER1Q9C0I3 900 aa35.43■■■■□ 3.26
FMR1-216ENST00000616614 RCOR1Q9UKL0 485 aa35.43■■■■□ 3.26
FMR1-216ENST00000616614 CFAP45Q9UL16 551 aa35.43■■■■□ 3.26
FMR1-216ENST00000616614 NOC2LQ9Y3T9 749 aaKnown RBP35.43■■■■□ 3.26
FMR1-216ENST00000616614 CD52P31358 61 aa35.42■■■■□ 3.26
FMR1-216ENST00000616614 NUCB2P80303 420 aa35.42■■■■□ 3.26
FMR1-216ENST00000616614 TSHZ1Q6ZSZ6 1077 aa35.42■■■■□ 3.26
FMR1-216ENST00000616614 MAEAQ7L5Y9 396 aa35.42■■■■□ 3.26
FMR1-216ENST00000616614 GPRC5CQ9NQ84 441 aa35.42■■■■□ 3.26
FMR1-216ENST00000616614 NT5C3AQ9H0P0 336 aa35.41■■■■□ 3.26
FMR1-216ENST00000616614 RBM19Q9Y4C8 960 aaKnown RBP35.41■■■■□ 3.26
FMR1-216ENST00000616614 SQORQ9Y6N5 450 aa35.41■■■■□ 3.26
FMR1-216ENST00000616614 ARID2Q68CP9 1835 aa35.41■■■■□ 3.26
FMR1-216ENST00000616614 SLC26A4O43511 780 aa35.4■■■■□ 3.26
FMR1-216ENST00000616614 GAS2O43903 313 aaKnown RBP35.4■■■■□ 3.26
FMR1-216ENST00000616614 CYP11B2P19099 503 aa35.4■■■■□ 3.26
FMR1-216ENST00000616614 ARL2P36404 184 aa35.4■■■■□ 3.26
FMR1-216ENST00000616614 HABP4Q5JVS0 413 aaKnown RBP35.4■■■■□ 3.26
FMR1-216ENST00000616614 AXDND1Q5T1B0 1012 aaPredicted RBP35.4■■■■□ 3.26
FMR1-216ENST00000616614 PSPC1Q8WXF1 523 aaKnown RBP35.4■■■■□ 3.26
FMR1-216ENST00000616614 SEPT8Q92599 483 aa35.4■■■■□ 3.26
FMR1-216ENST00000616614 CDK5RAP3Q96JB5 506 aa35.4■■■■□ 3.26
FMR1-216ENST00000616614 PADI3Q9ULW8 664 aa35.4■■■■□ 3.26
FMR1-216ENST00000616614 COL4A3BPQ9Y5P4 624 aa35.4■■■■□ 3.26
FMR1-216ENST00000616614 A0A087WZ62 844 aa35.4■■■■□ 3.26
FMR1-216ENST00000616614 ACTN1P12814 892 aa35.4■■■■□ 3.26
FMR1-216ENST00000616614 PLCG1P19174 1290 aa35.4■■■■□ 3.26
FMR1-216ENST00000616614 LAMTOR4Q0VGL1 99 aa35.4■■■■□ 3.26
FMR1-216ENST00000616614 KCNG4Q8TDN1 519 aa35.4■■■■□ 3.26
FMR1-216ENST00000616614 TCP11Q8WWU5 503 aa35.4■■■■□ 3.26
FMR1-216ENST00000616614 NLRP7Q8WX94 980 aa35.4■■■■□ 3.26
FMR1-216ENST00000616614 CALML4Q96GE6 196 aa35.4■■■■□ 3.26
FMR1-216ENST00000616614 FDXACB1Q9BRP7 624 aaPredicted RBP35.4■■■■□ 3.26
FMR1-216ENST00000616614 POLD4Q9HCU8 107 aa35.4■■■■□ 3.26
FMR1-216ENST00000616614 LAMA2P24043 3122 aaKnown RBP35.39■■■■□ 3.26
FMR1-216ENST00000616614 FAM109BQ6ICB4 259 aaPredicted RBP35.39■■■■□ 3.26
FMR1-216ENST00000616614 USP38Q8NB14 1042 aa35.39■■■■□ 3.26
FMR1-216ENST00000616614 ASAP3Q8TDY4 903 aa35.39■■■■□ 3.26
FMR1-216ENST00000616614 NLRP4Q96MN2 994 aa35.39■■■■□ 3.26
FMR1-216ENST00000616614 BLOC1S4Q9NUP1 217 aa35.39■■■■□ 3.26
FMR1-216ENST00000616614 PCDHA7Q9UN72 937 aa35.39■■■■□ 3.26
FMR1-216ENST00000616614 ZBBXA8MT70 800 aa35.38■■■■□ 3.25
FMR1-216ENST00000616614 CSDE1O75534 798 aaKnown RBP35.38■■■■□ 3.25
FMR1-216ENST00000616614 IKBKEQ14164 716 aa35.38■■■■□ 3.25
FMR1-216ENST00000616614 SHC4Q6S5L8 630 aa35.38■■■■□ 3.25
FMR1-216ENST00000616614 FAM228AQ86W67 206 aa35.38■■■■□ 3.25
FMR1-216ENST00000616614 ZNF710Q8N1W2 664 aa35.38■■■■□ 3.25
FMR1-216ENST00000616614 KCTD17Q8N5Z5 321 aa35.38■■■■□ 3.25
FMR1-216ENST00000616614 RUSC1Q9BVN2 902 aa35.38■■■■□ 3.25
FMR1-216ENST00000616614 IFT122Q9HBG6 1241 aa35.38■■■■□ 3.25
FMR1-216ENST00000616614 ERVK-5Q9HDB9 667 aa35.38■■■■□ 3.25
FMR1-216ENST00000616614 ATP6V1DQ9Y5K8 247 aa35.38■■■■□ 3.25
FMR1-216ENST00000616614 CUTAO60888 179 aa35.37■■■■□ 3.25
FMR1-216ENST00000616614 RPS6KA5O75582 802 aa35.37■■■■□ 3.25
FMR1-216ENST00000616614 BAIAP3O94812 1187 aa35.37■■■■□ 3.25
FMR1-216ENST00000616614 DARSP14868 501 aaKnown RBP35.37■■■■□ 3.25
FMR1-216ENST00000616614 NCLP19338 710 aaKnown RBP35.37■■■■□ 3.25
FMR1-216ENST00000616614 EIF4BP23588 611 aaKnown RBP35.37■■■■□ 3.25
FMR1-216ENST00000616614 SLC12A3P55017 1021 aa35.37■■■■□ 3.25
FMR1-216ENST00000616614 KRT85P78386 507 aa35.37■■■■□ 3.25
FMR1-216ENST00000616614 LEO1Q8WVC0 666 aaPredicted RBP35.37■■■■□ 3.25
FMR1-216ENST00000616614 POLR3FQ9H1D9 316 aaPredicted RBP35.37■■■■□ 3.25
FMR1-216ENST00000616614 TMX1Q9H3N1 280 aa35.37■■■■□ 3.25
FMR1-216ENST00000616614 ST3GAL5Q9UNP4 418 aa35.37■■■■□ 3.25
FMR1-216ENST00000616614 A0A087X0B3 334 aa35.36■■■■□ 3.25
FMR1-216ENST00000616614 ABHD14A-ACY1A0A1B0GW23 586 aa35.36■■■■□ 3.25
FMR1-216ENST00000616614 PLA2G4BP0C869 781 aa35.36■■■■□ 3.25
FMR1-216ENST00000616614 SRGAP2CP0DJJ0 459 aa35.36■■■■□ 3.25
FMR1-216ENST00000616614 GLRA2P23416 452 aa35.36■■■■□ 3.25
FMR1-216ENST00000616614 WDR5P61964 334 aaKnown RBP35.36■■■■□ 3.25
FMR1-216ENST00000616614 CDC42EP1Q00587 391 aa35.36■■■■□ 3.25
FMR1-216ENST00000616614 PAK2Q13177 524 aa35.36■■■■□ 3.25
FMR1-216ENST00000616614 LRIT3Q3SXY7 679 aa35.36■■■■□ 3.25
FMR1-216ENST00000616614 RINT1Q6NUQ1 792 aa35.36■■■■□ 3.25
FMR1-216ENST00000616614 LIN28BQ6ZN17 250 aaKnown RBP eCLIP35.36■■■■□ 3.25
FMR1-216ENST00000616614 C1orf186Q6ZWK4 172 aa35.36■■■■□ 3.25
FMR1-216ENST00000616614 SYT2Q8N9I0 419 aaPredicted RBP35.36■■■■□ 3.25
FMR1-216ENST00000616614 MCPH1Q8NEM0 835 aa35.36■■■■□ 3.25
FMR1-216ENST00000616614 APBB2Q92870 758 aa35.36■■■■□ 3.25
FMR1-216ENST00000616614 SCLT1Q96NL6 688 aa35.36■■■■□ 3.25
FMR1-216ENST00000616614 TRIOBPQ9H2D6 2365 aa35.35■■■■□ 3.25
FMR1-216ENST00000616614 SOX1O00570 391 aaPredicted RBP35.35■■■■□ 3.25
FMR1-216ENST00000616614 FGFR4P22455 802 aa35.35■■■■□ 3.25
FMR1-216ENST00000616614 FAM102BQ5T8I3 360 aa35.35■■■■□ 3.25
FMR1-216ENST00000616614 ZNF410Q86VK4 478 aa35.35■■■■□ 3.25
FMR1-216ENST00000616614 RASSF8Q8NHQ8 419 aa35.35■■■■□ 3.25
FMR1-216ENST00000616614 SLC4A7Q9Y6M7 1214 aa35.35■■■■□ 3.25
FMR1-216ENST00000616614 LOC101059915A0A1B0GWI6 518 aaPredicted RBP35.34■■■■□ 3.25
FMR1-216ENST00000616614 GRXCR1A8MXD5 290 aa35.34■■■■□ 3.25
FMR1-216ENST00000616614 ME1P48163 572 aa35.34■■■■□ 3.25
FMR1-216ENST00000616614 DEFB103AP81534 67 aa35.34■■■■□ 3.25
FMR1-216ENST00000616614 NFX1Q12986 1120 aaKnown RBP35.34■■■■□ 3.25
FMR1-216ENST00000616614 RTN4RL1Q86UN2 441 aaPredicted RBP35.34■■■■□ 3.25
FMR1-216ENST00000616614 PANK2Q9BZ23 570 aa35.34■■■■□ 3.25
FMR1-216ENST00000616614 ASAP2O43150 1006 aa35.33■■■■□ 3.25
FMR1-216ENST00000616614 SSBP05455 408 aaKnown RBP eCLIP35.33■■■■□ 3.25
FMR1-216ENST00000616614 CAPSQ13938 189 aa35.33■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms