RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 XPNPEP1Q9NQW7 623 aa18.68■□□□□ 0.58
CBWD3-211ENST00000615061 ST3GAL5Q9UNP4 418 aa18.68■□□□□ 0.58
CBWD3-211ENST00000615061 SPTBN5Q9NRC6 3674 aaKnown RBP18.67■□□□□ 0.58
CBWD3-211ENST00000615061 TMEM265A0A087WTH1 108 aa18.67■□□□□ 0.58
CBWD3-211ENST00000615061 LAD1O00515 517 aa18.67■□□□□ 0.58
CBWD3-211ENST00000615061 MGEA5O60502 916 aa18.67■□□□□ 0.58
CBWD3-211ENST00000615061 FGFR4P22455 802 aa18.67■□□□□ 0.58
CBWD3-211ENST00000615061 RPA1P27694 616 aa18.67■□□□□ 0.58
CBWD3-211ENST00000615061 DNM2P50570 870 aa18.67■□□□□ 0.58
CBWD3-211ENST00000615061 RESTQ13127 1097 aa18.67■□□□□ 0.58
CBWD3-211ENST00000615061 EMC2Q15006 297 aa18.67■□□□□ 0.58
CBWD3-211ENST00000615061 PPP2R2DQ66LE6 453 aa18.67■□□□□ 0.58
CBWD3-211ENST00000615061 NLRP7Q8WX94 980 aa18.67■□□□□ 0.58
CBWD3-211ENST00000615061 TOP1MTQ969P6 601 aa18.67■□□□□ 0.58
CBWD3-211ENST00000615061 SCLT1Q96NL6 688 aa18.67■□□□□ 0.58
CBWD3-211ENST00000615061 A0A087WZ62 844 aa18.66■□□□□ 0.58
CBWD3-211ENST00000615061 EIF4BP23588 611 aaKnown RBP18.66■□□□□ 0.58
CBWD3-211ENST00000615061 RFC5P40937 340 aa18.66■□□□□ 0.58
CBWD3-211ENST00000615061 PRPHP41219 470 aa18.66■□□□□ 0.58
CBWD3-211ENST00000615061 DTHD1Q6ZMT9 781 aa18.66■□□□□ 0.58
CBWD3-211ENST00000615061 ERMNQ8TAM6 284 aa18.66■□□□□ 0.58
CBWD3-211ENST00000615061 CDX2Q99626 313 aaPredicted RBP18.66■□□□□ 0.58
CBWD3-211ENST00000615061 FDXACB1Q9BRP7 624 aaPredicted RBP18.66■□□□□ 0.58
CBWD3-211ENST00000615061 CERS4Q9HA82 394 aa18.66■□□□□ 0.58
CBWD3-211ENST00000615061 ANKEF1Q9NU02 776 aa18.66■□□□□ 0.58
CBWD3-211ENST00000615061 STX6O43752 255 aa18.65■□□□□ 0.58
CBWD3-211ENST00000615061 IBSPP21815 317 aaPredicted RBP18.65■□□□□ 0.58
CBWD3-211ENST00000615061 CCT6AP40227 531 aaKnown RBP18.65■□□□□ 0.58
CBWD3-211ENST00000615061 PDIA5Q14554 519 aa18.65■□□□□ 0.58
CBWD3-211ENST00000615061 SNX29Q8TEQ0 813 aa18.65■□□□□ 0.58
CBWD3-211ENST00000615061 PRPF31Q8WWY3 499 aaKnown RBP18.65■□□□□ 0.58
CBWD3-211ENST00000615061 NLRP4Q96MN2 994 aa18.65■□□□□ 0.58
CBWD3-211ENST00000615061 RAD9AQ99638 391 aa18.65■□□□□ 0.58
CBWD3-211ENST00000615061 JPH2Q9BR39 696 aaPredicted RBP18.65■□□□□ 0.58
CBWD3-211ENST00000615061 PRRC2BQ5JSZ5 2229 aaKnown RBP18.65■□□□□ 0.58
CBWD3-211ENST00000615061 VWA3AA6NCI4 1184 aa18.65■□□□□ 0.58
CBWD3-211ENST00000615061 HSP90AA1P07900 732 aaKnown RBP18.65■□□□□ 0.58
CBWD3-211ENST00000615061 DARSP14868 501 aaKnown RBP18.65■□□□□ 0.58
CBWD3-211ENST00000615061 MYLIPQ8WY64 445 aa18.65■□□□□ 0.58
CBWD3-211ENST00000615061 MTRQ99707 1265 aa18.65■□□□□ 0.58
CBWD3-211ENST00000615061 MMTAG2Q9BU76 263 aaKnown RBP18.65■□□□□ 0.58
CBWD3-211ENST00000615061 FTHL17Q9BXU8 183 aa18.65■□□□□ 0.58
CBWD3-211ENST00000615061 TSPYL2Q9H2G4 693 aaPredicted RBP18.65■□□□□ 0.58
CBWD3-211ENST00000615061 PRDM12Q9H4Q4 367 aa18.65■□□□□ 0.58
CBWD3-211ENST00000615061 PPME1Q9Y570 386 aa18.65■□□□□ 0.58
CBWD3-211ENST00000615061 COL4A3BPQ9Y5P4 624 aa18.65■□□□□ 0.58
CBWD3-211ENST00000615061 GPR182O15218 404 aa18.64■□□□□ 0.57
CBWD3-211ENST00000615061 USO1O60763 962 aaKnown RBP18.64■□□□□ 0.57
CBWD3-211ENST00000615061 TAP1Q03518 808 aa18.64■□□□□ 0.57
CBWD3-211ENST00000615061 SF3A1Q15459 793 aaKnown RBP18.64■□□□□ 0.57
CBWD3-211ENST00000615061 HAUS3Q68CZ6 603 aa18.64■□□□□ 0.57
CBWD3-211ENST00000615061 CCDC43Q96MW1 224 aaKnown RBP18.64■□□□□ 0.57
CBWD3-211ENST00000615061 NACC1Q96RE7 527 aa18.64■□□□□ 0.57
CBWD3-211ENST00000615061 MYO7AQ13402 2215 aa18.63■□□□□ 0.57
CBWD3-211ENST00000615061 SRGAP2CP0DJJ0 459 aa18.63■□□□□ 0.57
CBWD3-211ENST00000615061 HTRA4P83105 476 aaPredicted RBP18.63■□□□□ 0.57
CBWD3-211ENST00000615061 GRIN1Q05586 938 aa18.63■□□□□ 0.57
CBWD3-211ENST00000615061 PSPC1Q8WXF1 523 aaKnown RBP18.63■□□□□ 0.57
CBWD3-211ENST00000615061 ADAM2Q99965 735 aa18.63■□□□□ 0.57
CBWD3-211ENST00000615061 RAB34Q9BZG1 259 aa18.63■□□□□ 0.57
CBWD3-211ENST00000615061 KIAA1024Q9UPX6 916 aa18.63■□□□□ 0.57
CBWD3-211ENST00000615061 CLIC4Q9Y696 253 aa18.63■□□□□ 0.57
CBWD3-211ENST00000615061 MYH15Q9Y2K3 1946 aa18.63■□□□□ 0.57
CBWD3-211ENST00000615061 DGAT1O75907 488 aa18.63■□□□□ 0.57
CBWD3-211ENST00000615061 XRCC6P12956 609 aaKnown RBP eCLIP18.63■□□□□ 0.57
CBWD3-211ENST00000615061 LAMTOR4Q0VGL1 99 aa18.63■□□□□ 0.57
CBWD3-211ENST00000615061 FOXD4L5Q5VV16 416 aaPredicted RBP18.63■□□□□ 0.57
CBWD3-211ENST00000615061 MAEAQ7L5Y9 396 aa18.63■□□□□ 0.57
CBWD3-211ENST00000615061 EXOC8Q8IYI6 725 aa18.63■□□□□ 0.57
CBWD3-211ENST00000615061 FOXD4L4Q8WXT5 416 aaPredicted RBP18.63■□□□□ 0.57
CBWD3-211ENST00000615061 YME1L1Q96TA2 773 aa18.63■□□□□ 0.57
CBWD3-211ENST00000615061 GCOM2Q9BZD3 368 aaPredicted RBP18.63■□□□□ 0.57
CBWD3-211ENST00000615061 ATP6V0A4Q9HBG4 840 aa18.63■□□□□ 0.57
CBWD3-211ENST00000615061 IFT122Q9HBG6 1241 aa18.63■□□□□ 0.57
CBWD3-211ENST00000615061 GPRC5CQ9NQ84 441 aa18.63■□□□□ 0.57
CBWD3-211ENST00000615061 DDX19AQ9NUU7 478 aaKnown RBP18.63■□□□□ 0.57
CBWD3-211ENST00000615061 INSL6Q9Y581 213 aa18.63■□□□□ 0.57
CBWD3-211ENST00000615061 COL4A6Q14031 1691 aa18.62■□□□□ 0.57
CBWD3-211ENST00000615061 LINC01553A4QN01 128 aa18.62■□□□□ 0.57
CBWD3-211ENST00000615061 EPOPA6NHQ4 379 aa18.62■□□□□ 0.57
CBWD3-211ENST00000615061 CEBPZQ03701 1054 aaKnown RBP18.62■□□□□ 0.57
CBWD3-211ENST00000615061 ZRSR1Q15695 479 aaKnown RBP18.62■□□□□ 0.57
CBWD3-211ENST00000615061 KRT79Q5XKE5 535 aa18.62■□□□□ 0.57
CBWD3-211ENST00000615061 ZNF410Q86VK4 478 aa18.62■□□□□ 0.57
CBWD3-211ENST00000615061 CRIPAKQ8N1N5 446 aa18.62■□□□□ 0.57
CBWD3-211ENST00000615061 ZNF710Q8N1W2 664 aa18.62■□□□□ 0.57
CBWD3-211ENST00000615061 ASAP3Q8TDY4 903 aa18.62■□□□□ 0.57
CBWD3-211ENST00000615061 MINDY3Q9H8M7 445 aa18.62■□□□□ 0.57
CBWD3-211ENST00000615061 DBR1Q9UK59 544 aaKnown RBP18.62■□□□□ 0.57
CBWD3-211ENST00000615061 MTUS1Q9ULD2 1270 aa18.62■□□□□ 0.57
CBWD3-211ENST00000615061 VCANP13611 3396 aa18.62■□□□□ 0.57
CBWD3-211ENST00000615061 NLRC5Q86WI3 1866 aa18.61■□□□□ 0.57
CBWD3-211ENST00000615061 XIRP2A4UGR9 3374 aa18.61■□□□□ 0.57
CBWD3-211ENST00000615061 DENND3A2RUS2 1198 aa18.61■□□□□ 0.57
CBWD3-211ENST00000615061 E9PMD0 336 aa18.61■□□□□ 0.57
CBWD3-211ENST00000615061 RFXAPO00287 272 aa18.61■□□□□ 0.57
CBWD3-211ENST00000615061 PKP1Q13835 747 aa18.61■□□□□ 0.57
CBWD3-211ENST00000615061 ARL6IP4Q66PJ3 421 aaKnown RBP18.61■□□□□ 0.57
CBWD3-211ENST00000615061 KCNK18Q7Z418 384 aa18.61■□□□□ 0.57
CBWD3-211ENST00000615061 TCP11Q8WWU5 503 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms