RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 BRCA1P38398 1863 aaKnown RBP17.97■□□□□ 0.47
CNOT3-208ENST00000613073 ZNF263O14978 683 aa17.96■□□□□ 0.47
CNOT3-208ENST00000613073 OPA1O60313 960 aa17.96■□□□□ 0.47
CNOT3-208ENST00000613073 NNTQ13423 1086 aa17.96■□□□□ 0.47
CNOT3-208ENST00000613073 ANGEL2Q5VTE6 544 aaKnown RBP17.96■□□□□ 0.47
CNOT3-208ENST00000613073 EPM2AIP1Q7L775 607 aaPredicted RBP17.96■□□□□ 0.47
CNOT3-208ENST00000613073 LXNQ9BS40 222 aa17.96■□□□□ 0.47
CNOT3-208ENST00000613073 LSM14BQ9BX40 385 aaKnown RBP17.96■□□□□ 0.47
CNOT3-208ENST00000613073 FZD9O00144 591 aa17.96■□□□□ 0.47
CNOT3-208ENST00000613073 GNA14O95837 355 aa17.96■□□□□ 0.47
CNOT3-208ENST00000613073 EPS15P42566 896 aa17.96■□□□□ 0.47
CNOT3-208ENST00000613073 RPS6P62753 249 aaKnown RBP17.96■□□□□ 0.47
CNOT3-208ENST00000613073 CCDC70Q6NSX1 233 aa17.96■□□□□ 0.47
CNOT3-208ENST00000613073 C1orf186Q6ZWK4 172 aa17.96■□□□□ 0.47
CNOT3-208ENST00000613073 MAEAQ7L5Y9 396 aa17.96■□□□□ 0.47
CNOT3-208ENST00000613073 CCDC13Q8IYE1 715 aa17.96■□□□□ 0.47
CNOT3-208ENST00000613073 CCDC170Q8IYT3 715 aa17.96■□□□□ 0.47
CNOT3-208ENST00000613073 NLGN2Q8NFZ4 835 aa17.96■□□□□ 0.47
CNOT3-208ENST00000613073 BAP1Q92560 729 aa17.96■□□□□ 0.47
CNOT3-208ENST00000613073 TAAR1Q96RJ0 339 aa17.96■□□□□ 0.47
CNOT3-208ENST00000613073 WRNIP1Q96S55 665 aa17.96■□□□□ 0.47
CNOT3-208ENST00000613073 HSF2BPO75031 334 aa17.96■□□□□ 0.46
CNOT3-208ENST00000613073 LSP1P33241 339 aa17.96■□□□□ 0.46
CNOT3-208ENST00000613073 EIF4A3P38919 411 aaKnown RBP17.96■□□□□ 0.46
CNOT3-208ENST00000613073 NAP1L1P55209 391 aaKnown RBP17.96■□□□□ 0.46
CNOT3-208ENST00000613073 EDRF1Q3B7T1 1238 aa17.96■□□□□ 0.46
CNOT3-208ENST00000613073 ZIM3Q96PE6 472 aa17.96■□□□□ 0.46
CNOT3-208ENST00000613073 BCCIPQ9P287 314 aaKnown RBP eCLIP17.96■□□□□ 0.46
CNOT3-208ENST00000613073 PPP1R9AQ9ULJ8 1098 aa17.96■□□□□ 0.46
CNOT3-208ENST00000613073 KCNH2Q12809 1159 aa17.95■□□□□ 0.46
CNOT3-208ENST00000613073 PREPLQ4J6C6 727 aaPredicted RBP17.95■□□□□ 0.46
CNOT3-208ENST00000613073 NSMFQ6X4W1 530 aa17.95■□□□□ 0.46
CNOT3-208ENST00000613073 PPP4R3CPQ6ZMV5 832 aa17.95■□□□□ 0.46
CNOT3-208ENST00000613073 SYTL5Q8TDW5 730 aaPredicted RBP17.95■□□□□ 0.46
CNOT3-208ENST00000613073 SH2D3AQ9BRG2 576 aa17.95■□□□□ 0.46
CNOT3-208ENST00000613073 SKAP2O75563 359 aaPredicted RBP17.95■□□□□ 0.46
CNOT3-208ENST00000613073 NOL4O94818 638 aa17.95■□□□□ 0.46
CNOT3-208ENST00000613073 MYCLP12524 364 aaPredicted RBP17.95■□□□□ 0.46
CNOT3-208ENST00000613073 CASP4P49662 377 aa17.95■□□□□ 0.46
CNOT3-208ENST00000613073 CDR1P51861 262 aa17.95■□□□□ 0.46
CNOT3-208ENST00000613073 POLR2FP61218 127 aaKnown RBP17.95■□□□□ 0.46
CNOT3-208ENST00000613073 MRPS9P82933 396 aaKnown RBP17.95■□□□□ 0.46
CNOT3-208ENST00000613073 PRKG1Q13976 671 aa17.95■□□□□ 0.46
CNOT3-208ENST00000613073 DCAF17Q5H9S7 520 aaPredicted RBP17.95■□□□□ 0.46
CNOT3-208ENST00000613073 NAIF1Q69YI7 327 aaPredicted RBP17.95■□□□□ 0.46
CNOT3-208ENST00000613073 MCF2L2Q86YR7 1114 aa17.95■□□□□ 0.46
CNOT3-208ENST00000613073 ZNF473Q8WTR7 871 aaKnown RBP17.95■□□□□ 0.46
CNOT3-208ENST00000613073 ATG4CQ96DT6 458 aa17.95■□□□□ 0.46
CNOT3-208ENST00000613073 NACC1Q96RE7 527 aa17.95■□□□□ 0.46
CNOT3-208ENST00000613073 SLC40A1Q9NP59 571 aa17.95■□□□□ 0.46
CNOT3-208ENST00000613073 TRAF3IP3Q9Y228 551 aa17.95■□□□□ 0.46
CNOT3-208ENST00000613073 AKAP3O75969 853 aa17.94■□□□□ 0.46
CNOT3-208ENST00000613073 RPSAP08865 295 aaKnown RBP17.94■□□□□ 0.46
CNOT3-208ENST00000613073 EPHA7Q15375 998 aa17.94■□□□□ 0.46
CNOT3-208ENST00000613073 SPA17Q15506 151 aa17.94■□□□□ 0.46
CNOT3-208ENST00000613073 ENOX2Q16206 610 aaKnown RBP17.94■□□□□ 0.46
CNOT3-208ENST00000613073 TRPM4Q8TD43 1214 aa17.94■□□□□ 0.46
CNOT3-208ENST00000613073 A1CFQ9NQ94 594 aaKnown RBP17.94■□□□□ 0.46
CNOT3-208ENST00000613073 ASTN1O14525 1302 aa17.94■□□□□ 0.46
CNOT3-208ENST00000613073 CALUO43852 315 aaPredicted RBP17.94■□□□□ 0.46
CNOT3-208ENST00000613073 AKR1B10O60218 316 aa17.94■□□□□ 0.46
CNOT3-208ENST00000613073 NR3C1P04150 777 aa17.94■□□□□ 0.46
CNOT3-208ENST00000613073 KIF11P52732 1056 aa17.94■□□□□ 0.46
CNOT3-208ENST00000613073 MARSP56192 900 aaKnown RBP17.94■□□□□ 0.46
CNOT3-208ENST00000613073 ARID5AQ03989 594 aa17.94■□□□□ 0.46
CNOT3-208ENST00000613073 ITGB3BPQ13352 177 aaPredicted RBP17.94■□□□□ 0.46
CNOT3-208ENST00000613073 TKFCQ3LXA3 575 aa17.94■□□□□ 0.46
CNOT3-208ENST00000613073 MIER3Q7Z3K6 550 aa17.94■□□□□ 0.46
CNOT3-208ENST00000613073 IQCDQ96DY2 449 aa17.94■□□□□ 0.46
CNOT3-208ENST00000613073 CCDC114Q96M63 670 aa17.94■□□□□ 0.46
CNOT3-208ENST00000613073 PARVGQ9HBI0 331 aa17.94■□□□□ 0.46
CNOT3-208ENST00000613073 ARMCX3Q9UH62 379 aaPredicted RBP17.94■□□□□ 0.46
CNOT3-208ENST00000613073 RIPK3Q9Y572 518 aa17.94■□□□□ 0.46
CNOT3-208ENST00000613073 PCDHB13Q9Y5F0 798 aa17.94■□□□□ 0.46
CNOT3-208ENST00000613073 ESYT3A0FGR9 886 aa17.93■□□□□ 0.46
CNOT3-208ENST00000613073 PDXKO00764 312 aa17.93■□□□□ 0.46
CNOT3-208ENST00000613073 BACH1O14867 736 aa17.93■□□□□ 0.46
CNOT3-208ENST00000613073 KRT86O43790 486 aa17.93■□□□□ 0.46
CNOT3-208ENST00000613073 HNRNPH3P31942 346 aaKnown RBP17.93■□□□□ 0.46
CNOT3-208ENST00000613073 CDK17Q00537 523 aa17.93■□□□□ 0.46
CNOT3-208ENST00000613073 PLS1Q14651 629 aa17.93■□□□□ 0.46
CNOT3-208ENST00000613073 TCERG1LQ5VWI1 586 aa17.93■□□□□ 0.46
CNOT3-208ENST00000613073 PDXDC1Q6P996 788 aa17.93■□□□□ 0.46
CNOT3-208ENST00000613073 ZC3H3Q8IXZ2 948 aaKnown RBP17.93■□□□□ 0.46
CNOT3-208ENST00000613073 RPGRIP1Q96KN7 1286 aa17.93■□□□□ 0.46
CNOT3-208ENST00000613073 ZHX2Q9Y6X8 837 aa17.93■□□□□ 0.46
CNOT3-208ENST00000613073 ACTN1P12814 892 aa17.93■□□□□ 0.46
CNOT3-208ENST00000613073 DNA2P51530 1060 aa17.93■□□□□ 0.46
CNOT3-208ENST00000613073 CLNS1AP54105 237 aaKnown RBP17.93■□□□□ 0.46
CNOT3-208ENST00000613073 HMGCS2P54868 508 aa17.93■□□□□ 0.46
CNOT3-208ENST00000613073 BACE1P56817 501 aa17.93■□□□□ 0.46
CNOT3-208ENST00000613073 MTMR1Q13613 665 aa17.93■□□□□ 0.46
CNOT3-208ENST00000613073 TDRD12Q587J7 1177 aaKnown RBP17.93■□□□□ 0.46
CNOT3-208ENST00000613073 B3GNT9Q6UX72 402 aa17.93■□□□□ 0.46
CNOT3-208ENST00000613073 FAXDC2Q96IV6 333 aa17.93■□□□□ 0.46
CNOT3-208ENST00000613073 RIT2Q99578 217 aa17.93■□□□□ 0.46
CNOT3-208ENST00000613073 PPANQ9NQ55 473 aaKnown RBP17.93■□□□□ 0.46
CNOT3-208ENST00000613073 TYW1Q9NV66 732 aaKnown RBP17.93■□□□□ 0.46
CNOT3-208ENST00000613073 RPTORQ8N122 1335 aa17.93■□□□□ 0.46
CNOT3-208ENST00000613073 E7EVH7 732 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms