RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 LTBP1Q14766 1721 aa11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 IGKV6D-41A0A0C4DH26 115 aa11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 TLR2O60603 784 aa11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 SKAP2O75563 359 aaPredicted RBP11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 SNHG28P0DPA3 235 aa11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 KLRC1P26715 233 aa11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 EPS15P42566 896 aa11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 GUCY2DQ02846 1103 aa11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 TCP10Q12799 353 aa11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 HERC4Q5GLZ8 1057 aaPredicted RBP11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 HAUS3Q68CZ6 603 aa11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 LRRC55Q6ZSA7 311 aa11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 LDHDQ86WU2 507 aa11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 ADGRF4Q8IZF3 695 aa11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 BAP1Q92560 729 aa11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 TAF1DQ9H5J8 278 aaPredicted RBP11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 ZNF277Q9NRM2 450 aaPredicted RBP11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 PANK4Q9NVE7 773 aa11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 FBXO9Q9UK97 447 aaPredicted RBP11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 CNTNAP1P78357 1384 aa11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 SCN4AP35499 1836 aa11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 POTEFA5A3E0 1075 aa11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 ZEB2O60315 1214 aa11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 GLI1P08151 1106 aa11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 HARSP12081 509 aaKnown RBP11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 POTEGQ6S5H5 508 aa11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 POTEEQ6S8J3 1075 aa11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 ZNF662Q6ZS27 426 aa11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 SLF2Q8IX21 1173 aa11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 PURBQ96QR8 312 aaKnown RBP11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 RUFY1Q96T51 708 aa11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 KRT12Q99456 494 aa11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 FAM107BQ9H098 131 aa11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 FAM184BQ9ULE4 1060 aa11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 HYOU1Q9Y4L1 999 aa11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 PCDHAC2Q9Y5I4 1007 aa11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 A0A087X0T9 212 aa11.63□□□□□ -0.55
PCDHGC3-202ENST00000611950 ANO9A1A5B4 782 aa11.63□□□□□ -0.55
PCDHGC3-202ENST00000611950 ANKRD62A6NC57 917 aa11.63□□□□□ -0.55
PCDHGC3-202ENST00000611950 SPDYE3A6NKU9 549 aa11.63□□□□□ -0.55
PCDHGC3-202ENST00000611950 EIF3FO00303 357 aaPredicted RBP11.63□□□□□ -0.55
PCDHGC3-202ENST00000611950 OPA1O60313 960 aa11.63□□□□□ -0.55
PCDHGC3-202ENST00000611950 FAM228BP0C875 321 aa11.63□□□□□ -0.55
PCDHGC3-202ENST00000611950 PAFAH1B1P43034 410 aa11.63□□□□□ -0.55
PCDHGC3-202ENST00000611950 FXR2P51116 673 aaKnown RBP eCLIP11.63□□□□□ -0.55
PCDHGC3-202ENST00000611950 CYP4A11Q02928 519 aa11.63□□□□□ -0.55
PCDHGC3-202ENST00000611950 PDCLQ13371 301 aa11.63□□□□□ -0.55
PCDHGC3-202ENST00000611950 DOK7Q18PE1 504 aa11.63□□□□□ -0.55
PCDHGC3-202ENST00000611950 FAM26FQ5R3K3 315 aa11.63□□□□□ -0.55
PCDHGC3-202ENST00000611950 FAM83BQ5T0W9 1011 aa11.63□□□□□ -0.55
PCDHGC3-202ENST00000611950 KLHDC7AQ5VTJ3 777 aa11.63□□□□□ -0.55
PCDHGC3-202ENST00000611950 TCERG1LQ5VWI1 586 aa11.63□□□□□ -0.55
PCDHGC3-202ENST00000611950 OTUD6AQ7L8S5 288 aa11.63□□□□□ -0.55
PCDHGC3-202ENST00000611950 ZKSCAN4Q969J2 545 aaPredicted RBP11.63□□□□□ -0.55
PCDHGC3-202ENST00000611950 CENPOQ9BU64 300 aa11.63□□□□□ -0.55
PCDHGC3-202ENST00000611950 JMJD4Q9H9V9 463 aa11.63□□□□□ -0.55
PCDHGC3-202ENST00000611950 EPB41L5Q9HCM4 733 aa11.63□□□□□ -0.55
PCDHGC3-202ENST00000611950 PCDHA12Q9UN75 941 aa11.63□□□□□ -0.55
PCDHGC3-202ENST00000611950 BOLA2-SMG1P6H3BVE0 249 aa11.63□□□□□ -0.55
PCDHGC3-202ENST00000611950 VEGFBP49765 207 aa11.63□□□□□ -0.55
PCDHGC3-202ENST00000611950 CASP5P51878 434 aa11.63□□□□□ -0.55
PCDHGC3-202ENST00000611950 GNGT1P63211 74 aa11.63□□□□□ -0.55
PCDHGC3-202ENST00000611950 KIAA0753Q2KHM9 967 aa11.63□□□□□ -0.55
PCDHGC3-202ENST00000611950 USH1GQ495M9 461 aa11.63□□□□□ -0.55
PCDHGC3-202ENST00000611950 ASPRV1Q53RT3 343 aa11.63□□□□□ -0.55
PCDHGC3-202ENST00000611950 DCAF17Q5H9S7 520 aaPredicted RBP11.63□□□□□ -0.55
PCDHGC3-202ENST00000611950 WLSQ5T9L3 541 aa11.63□□□□□ -0.55
PCDHGC3-202ENST00000611950 PDXDC1Q6P996 788 aa11.63□□□□□ -0.55
PCDHGC3-202ENST00000611950 SDCCAG8Q86SQ7 713 aaPredicted RBP11.63□□□□□ -0.55
PCDHGC3-202ENST00000611950 GPBP1Q86WP2 473 aa11.63□□□□□ -0.55
PCDHGC3-202ENST00000611950 HAS1Q92839 578 aa11.63□□□□□ -0.55
PCDHGC3-202ENST00000611950 TSG101Q99816 390 aa11.63□□□□□ -0.55
PCDHGC3-202ENST00000611950 UBAP1Q9NZ09 502 aa11.63□□□□□ -0.55
PCDHGC3-202ENST00000611950 ADAMTSL1Q8N6G6 1762 aa11.62□□□□□ -0.55
PCDHGC3-202ENST00000611950 ZNF541Q9H0D2 1346 aa11.62□□□□□ -0.55
PCDHGC3-202ENST00000611950 TMEM88BA6NKF7 163 aa11.62□□□□□ -0.55
PCDHGC3-202ENST00000611950 ENO4A6NNW6 628 aa11.62□□□□□ -0.55
PCDHGC3-202ENST00000611950 HEXIM1O94992 359 aaKnown RBP11.62□□□□□ -0.55
PCDHGC3-202ENST00000611950 SCNN1BP51168 640 aa11.62□□□□□ -0.55
PCDHGC3-202ENST00000611950 TUBB4BP68371 445 aa11.62□□□□□ -0.55
PCDHGC3-202ENST00000611950 ZNF543Q08ER8 600 aa11.62□□□□□ -0.55
PCDHGC3-202ENST00000611950 SF3A3Q12874 501 aaKnown RBP eCLIP11.62□□□□□ -0.55
PCDHGC3-202ENST00000611950 ORC2Q13416 577 aaPredicted RBP11.62□□□□□ -0.55
PCDHGC3-202ENST00000611950 HGSNATQ68CP4 663 aa11.62□□□□□ -0.55
PCDHGC3-202ENST00000611950 PACS1Q6VY07 963 aa11.62□□□□□ -0.55
PCDHGC3-202ENST00000611950 CCDC65Q8IXS2 484 aa11.62□□□□□ -0.55
PCDHGC3-202ENST00000611950 MYO1HQ8N1T3 1032 aa11.62□□□□□ -0.55
PCDHGC3-202ENST00000611950 GUF1Q8N442 669 aaKnown RBP11.62□□□□□ -0.55
PCDHGC3-202ENST00000611950 AENQ8WTP8 325 aaKnown RBP11.62□□□□□ -0.55
PCDHGC3-202ENST00000611950 NACC2Q96BF6 587 aa11.62□□□□□ -0.55
PCDHGC3-202ENST00000611950 CCDC43Q96MW1 224 aaKnown RBP11.62□□□□□ -0.55
PCDHGC3-202ENST00000611950 CRAMP1Q96RY5 1269 aa11.62□□□□□ -0.55
PCDHGC3-202ENST00000611950 STIM2Q9P246 746 aa11.62□□□□□ -0.55
PCDHGC3-202ENST00000611950 COL4A3BPQ9Y5P4 624 aa11.62□□□□□ -0.55
PCDHGC3-202ENST00000611950 SFI1A8K8P3 1242 aa11.62□□□□□ -0.55
PCDHGC3-202ENST00000611950 NPR1P16066 1061 aa11.62□□□□□ -0.55
PCDHGC3-202ENST00000611950 SHMT1P34896 483 aa11.62□□□□□ -0.55
PCDHGC3-202ENST00000611950 LIG3P49916 1009 aa11.62□□□□□ -0.55
PCDHGC3-202ENST00000611950 CLNS1AP54105 237 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms