RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 JAK3P52333 1124 aa6.9□□□□□ -1.3
SNX13-213ENST00000611725 SEPT7Q16181 437 aaKnown RBP6.9□□□□□ -1.3
SNX13-213ENST00000611725 KRT39Q6A163 491 aa6.9□□□□□ -1.3
SNX13-213ENST00000611725 BAP1Q92560 729 aa6.9□□□□□ -1.3
SNX13-213ENST00000611725 CALR3Q96L12 384 aaKnown RBP6.9□□□□□ -1.3
SNX13-213ENST00000611725 STK33Q9BYT3 514 aa6.9□□□□□ -1.3
SNX13-213ENST00000611725 ANKRD62A6NC57 917 aa6.9□□□□□ -1.3
SNX13-213ENST00000611725 LRRIQ4A6NIV6 560 aa6.9□□□□□ -1.3
SNX13-213ENST00000611725 NR3C2P08235 984 aa6.9□□□□□ -1.3
SNX13-213ENST00000611725 MAP2K1Q02750 393 aaPredicted RBP6.9□□□□□ -1.3
SNX13-213ENST00000611725 TTC19Q6DKK2 380 aaPredicted RBP6.9□□□□□ -1.3
SNX13-213ENST00000611725 GSTA5Q7RTV2 222 aa6.9□□□□□ -1.3
SNX13-213ENST00000611725 ATP8A1Q9Y2Q0 1164 aa6.9□□□□□ -1.3
SNX13-213ENST00000611725 ZHX2Q9Y6X8 837 aa6.9□□□□□ -1.3
SNX13-213ENST00000611725 TCHHQ07283 1943 aa6.9□□□□□ -1.3
SNX13-213ENST00000611725 NR1D1P20393 614 aa6.9□□□□□ -1.31
SNX13-213ENST00000611725 CARSP49589 748 aaKnown RBP6.9□□□□□ -1.31
SNX13-213ENST00000611725 MNAT1P51948 309 aa6.9□□□□□ -1.31
SNX13-213ENST00000611725 BFSP1Q12934 665 aa6.9□□□□□ -1.31
SNX13-213ENST00000611725 ZNF746Q6NUN9 644 aaPredicted RBP6.9□□□□□ -1.31
SNX13-213ENST00000611725 DCUN1D2Q6PH85 259 aa6.9□□□□□ -1.31
SNX13-213ENST00000611725 UHMK1Q8TAS1 419 aaKnown RBP6.9□□□□□ -1.31
SNX13-213ENST00000611725 AGPAT3Q9NRZ7 376 aa6.9□□□□□ -1.31
SNX13-213ENST00000611725 CEP83Q9Y592 693 aa6.9□□□□□ -1.31
SNX13-213ENST00000611725 EMSYQ7Z589 1322 aa6.9□□□□□ -1.31
SNX13-213ENST00000611725 A0A1W2PRG0 241 aa6.9□□□□□ -1.31
SNX13-213ENST00000611725 TLR2O60603 784 aa6.9□□□□□ -1.31
SNX13-213ENST00000611725 DESP17661 470 aa6.9□□□□□ -1.31
SNX13-213ENST00000611725 NPEPPSP55786 919 aa6.9□□□□□ -1.31
SNX13-213ENST00000611725 CREG2Q8IUH2 290 aa6.9□□□□□ -1.31
SNX13-213ENST00000611725 USP38Q8NB14 1042 aa6.9□□□□□ -1.31
SNX13-213ENST00000611725 NSUN6Q8TEA1 469 aaKnown RBP6.9□□□□□ -1.31
SNX13-213ENST00000611725 LPAR1Q92633 364 aa6.9□□□□□ -1.31
SNX13-213ENST00000611725 CCDC114Q96M63 670 aa6.9□□□□□ -1.31
SNX13-213ENST00000611725 TTYH3Q9C0H2 523 aa6.9□□□□□ -1.31
SNX13-213ENST00000611725 SLITRK6Q9H5Y7 841 aa6.9□□□□□ -1.31
SNX13-213ENST00000611725 PPANQ9NQ55 473 aaKnown RBP6.9□□□□□ -1.31
SNX13-213ENST00000611725 HPCAL4Q9UM19 191 aa6.9□□□□□ -1.31
SNX13-213ENST00000611725 SNX24Q9Y343 169 aa6.9□□□□□ -1.31
SNX13-213ENST00000611725 WDR46O15213 610 aaKnown RBP6.9□□□□□ -1.31
SNX13-213ENST00000611725 FDX1P10109 184 aa6.9□□□□□ -1.31
SNX13-213ENST00000611725 SFNP31947 248 aa6.9□□□□□ -1.31
SNX13-213ENST00000611725 VPS41P49754 854 aa6.9□□□□□ -1.31
SNX13-213ENST00000611725 ZCWPW2Q504Y3 356 aa6.9□□□□□ -1.31
SNX13-213ENST00000611725 AGBL1Q96MI9 1066 aa6.9□□□□□ -1.31
SNX13-213ENST00000611725 PACSIN1Q9BY11 444 aa6.9□□□□□ -1.31
SNX13-213ENST00000611725 APEX2Q9UBZ4 518 aa6.9□□□□□ -1.31
SNX13-213ENST00000611725 AMACRQ9UHK6 382 aa6.9□□□□□ -1.31
SNX13-213ENST00000611725 PCDHA10Q9Y5I2 948 aa6.9□□□□□ -1.31
SNX13-213ENST00000611725 CHD2O14647 1828 aaKnown RBP6.89□□□□□ -1.31
SNX13-213ENST00000611725 EIF3DO15371 548 aaKnown RBP eCLIP6.89□□□□□ -1.31
SNX13-213ENST00000611725 RGS16O15492 202 aaPredicted RBP6.89□□□□□ -1.31
SNX13-213ENST00000611725 SLC15A2Q16348 729 aa6.89□□□□□ -1.31
SNX13-213ENST00000611725 Q4G0T1 1027 aa6.89□□□□□ -1.31
SNX13-213ENST00000611725 DNAJC18Q9H819 358 aa6.89□□□□□ -1.31
SNX13-213ENST00000611725 IGKV6D-41A0A0C4DH26 115 aa6.89□□□□□ -1.31
SNX13-213ENST00000611725 ANKRD65E5RJM6 399 aa6.89□□□□□ -1.31
SNX13-213ENST00000611725 PLSCR1O15162 318 aa6.89□□□□□ -1.31
SNX13-213ENST00000611725 GBP1P32455 592 aa6.89□□□□□ -1.31
SNX13-213ENST00000611725 DR1Q01658 176 aa6.89□□□□□ -1.31
SNX13-213ENST00000611725 RSBN1LQ6PCB5 846 aaPredicted RBP6.89□□□□□ -1.31
SNX13-213ENST00000611725 HDAC7Q8WUI4 952 aa6.89□□□□□ -1.31
SNX13-213ENST00000611725 PPM1EQ8WY54 764 aa6.89□□□□□ -1.31
SNX13-213ENST00000611725 HSD17B14Q9BPX1 270 aa6.89□□□□□ -1.31
SNX13-213ENST00000611725 AIPL1Q9NZN9 384 aa6.89□□□□□ -1.31
SNX13-213ENST00000611725 PARP2Q9UGN5 583 aa6.89□□□□□ -1.31
SNX13-213ENST00000611725 DENND3A2RUS2 1198 aa6.89□□□□□ -1.31
SNX13-213ENST00000611725 ZNF263O14978 683 aa6.89□□□□□ -1.31
SNX13-213ENST00000611725 PJA2O43164 708 aa6.89□□□□□ -1.31
SNX13-213ENST00000611725 TMEM253P0C7T8 217 aa6.89□□□□□ -1.31
SNX13-213ENST00000611725 ARP10275 920 aa6.89□□□□□ -1.31
SNX13-213ENST00000611725 TRPC3Q13507 836 aa6.89□□□□□ -1.31
SNX13-213ENST00000611725 ZNF571Q7Z3V5 609 aaPredicted RBP6.89□□□□□ -1.31
SNX13-213ENST00000611725 MAIP1Q8WWC4 291 aa6.89□□□□□ -1.31
SNX13-213ENST00000611725 RUNDC3BQ96NL0 473 aa6.89□□□□□ -1.31
SNX13-213ENST00000611725 FMO2Q99518 471 aa6.89□□□□□ -1.31
SNX13-213ENST00000611725 TAF1DQ9H5J8 278 aaPredicted RBP6.89□□□□□ -1.31
SNX13-213ENST00000611725 SAMD15Q9P1V8 674 aa6.89□□□□□ -1.31
SNX13-213ENST00000611725 USTQ9Y2C2 406 aa6.89□□□□□ -1.31
SNX13-213ENST00000611725 PCDHAC2Q9Y5I4 1007 aa6.89□□□□□ -1.31
SNX13-213ENST00000611725 PASKQ96RG2 1323 aa6.89□□□□□ -1.31
SNX13-213ENST00000611725 ADAMTSL3P82987 1691 aa6.89□□□□□ -1.31
SNX13-213ENST00000611725 E7EVH7 732 aa6.89□□□□□ -1.31
SNX13-213ENST00000611725 EML1O00423 815 aa6.89□□□□□ -1.31
SNX13-213ENST00000611725 CAP2P40123 477 aa6.89□□□□□ -1.31
SNX13-213ENST00000611725 VAMP7P51809 220 aa6.89□□□□□ -1.31
SNX13-213ENST00000611725 POLGP54098 1239 aaPredicted RBP6.89□□□□□ -1.31
SNX13-213ENST00000611725 RPS6P62753 249 aaKnown RBP6.89□□□□□ -1.31
SNX13-213ENST00000611725 ZNF211Q13398 564 aaPredicted RBP6.89□□□□□ -1.31
SNX13-213ENST00000611725 DENND2CQ68D51 928 aa6.89□□□□□ -1.31
SNX13-213ENST00000611725 ZNF720Q7Z2F6 126 aa6.89□□□□□ -1.31
SNX13-213ENST00000611725 FBXL13Q8NEE6 735 aa6.89□□□□□ -1.31
SNX13-213ENST00000611725 MS4A14Q96JA4 679 aa6.89□□□□□ -1.31
SNX13-213ENST00000611725 RNPC3Q96LT9 517 aaKnown RBP6.89□□□□□ -1.31
SNX13-213ENST00000611725 MXRA8Q9BRK3 442 aa6.89□□□□□ -1.31
SNX13-213ENST00000611725 PIM2Q9P1W9 311 aa6.89□□□□□ -1.31
SNX13-213ENST00000611725 NOC2LQ9Y3T9 749 aaKnown RBP6.89□□□□□ -1.31
SNX13-213ENST00000611725 SLIT2O94813 1529 aa6.89□□□□□ -1.31
SNX13-213ENST00000611725 GTPBP10A4D1E9 387 aaKnown RBP6.89□□□□□ -1.31
SNX13-213ENST00000611725 ZNF233A6NK53 670 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms