RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 RAD54LQ92698 747 aa17.39■□□□□ 0.37
RTN1-209ENST00000611068 DDX12PQ92771 950 aa17.39■□□□□ 0.37
RTN1-209ENST00000611068 BCAS3Q9H6U6 928 aa17.39■□□□□ 0.37
RTN1-209ENST00000611068 EXOC1Q9NV70 894 aa17.39■□□□□ 0.37
RTN1-209ENST00000611068 CLEC11AQ9Y240 323 aa17.39■□□□□ 0.37
RTN1-209ENST00000611068 IGLV3-22A0A075B6J6 115 aa17.38■□□□□ 0.37
RTN1-209ENST00000611068 EIF4E1BA6NMX2 242 aaKnown RBP17.38■□□□□ 0.37
RTN1-209ENST00000611068 EPB41P11171 864 aaKnown RBP17.38■□□□□ 0.37
RTN1-209ENST00000611068 RANBP1P43487 201 aa17.38■□□□□ 0.37
RTN1-209ENST00000611068 PABPC4Q13310 644 aaKnown RBP eCLIP17.38■□□□□ 0.37
RTN1-209ENST00000611068 ORC2Q13416 577 aaPredicted RBP17.38■□□□□ 0.37
RTN1-209ENST00000611068 SLC30A9Q6PML9 568 aa17.38■□□□□ 0.37
RTN1-209ENST00000611068 TMOD4Q9NZQ9 345 aa17.38■□□□□ 0.37
RTN1-209ENST00000611068 C15orf41Q9Y2V0 281 aa17.38■□□□□ 0.37
RTN1-209ENST00000611068 AFG3L2Q9Y4W6 797 aa17.38■□□□□ 0.37
RTN1-209ENST00000611068 E7EVH7 732 aa17.38■□□□□ 0.37
RTN1-209ENST00000611068 PDE2AO00408 941 aaPredicted RBP17.38■□□□□ 0.37
RTN1-209ENST00000611068 FESP07332 822 aa17.38■□□□□ 0.37
RTN1-209ENST00000611068 SCTRP47872 440 aa17.38■□□□□ 0.37
RTN1-209ENST00000611068 SPIRE1Q08AE8 756 aa17.38■□□□□ 0.37
RTN1-209ENST00000611068 B4GALNT2Q8NHY0 566 aa17.38■□□□□ 0.37
RTN1-209ENST00000611068 PIGOQ8TEQ8 1089 aa17.38■□□□□ 0.37
RTN1-209ENST00000611068 GUCA1BQ9UMX6 200 aa17.38■□□□□ 0.37
RTN1-209ENST00000611068 DICER1Q9UPY3 1922 aaKnown RBP17.38■□□□□ 0.37
RTN1-209ENST00000611068 A0A1B0GVG6 124 aa17.37■□□□□ 0.37
RTN1-209ENST00000611068 ANP32DO95626 131 aa17.37■□□□□ 0.37
RTN1-209ENST00000611068 ERVK-24P63145 666 aa17.37■□□□□ 0.37
RTN1-209ENST00000611068 C2orf54Q08AI8 447 aa17.37■□□□□ 0.37
RTN1-209ENST00000611068 MKRN3Q13064 507 aaKnown RBP17.37■□□□□ 0.37
RTN1-209ENST00000611068 Q4G0T1 1027 aa17.37■□□□□ 0.37
RTN1-209ENST00000611068 CWF19L1Q69YN2 538 aaKnown RBP17.37■□□□□ 0.37
RTN1-209ENST00000611068 GADL1Q6ZQY3 521 aa17.37■□□□□ 0.37
RTN1-209ENST00000611068 CYFIP2Q96F07 1278 aa17.37■□□□□ 0.37
RTN1-209ENST00000611068 EPAS1Q99814 870 aa17.37■□□□□ 0.37
RTN1-209ENST00000611068 TFR2Q9UP52 801 aa17.37■□□□□ 0.37
RTN1-209ENST00000611068 CENPFP49454 3210 aa17.37■□□□□ 0.37
RTN1-209ENST00000611068 ZNF185O15231 689 aa17.37■□□□□ 0.37
RTN1-209ENST00000611068 FAM107AO95990 144 aa17.37■□□□□ 0.37
RTN1-209ENST00000611068 ITGB5P18084 799 aa17.37■□□□□ 0.37
RTN1-209ENST00000611068 CASP14P31944 242 aa17.37■□□□□ 0.37
RTN1-209ENST00000611068 ELF3P78545 371 aaPredicted RBP17.37■□□□□ 0.37
RTN1-209ENST00000611068 PAK1Q13153 545 aa17.37■□□□□ 0.37
RTN1-209ENST00000611068 TMEM132BQ14DG7 1078 aa17.37■□□□□ 0.37
RTN1-209ENST00000611068 TPH2Q8IWU9 490 aa17.37■□□□□ 0.37
RTN1-209ENST00000611068 SLFN12Q8IYM2 578 aa17.37■□□□□ 0.37
RTN1-209ENST00000611068 RMND1Q9NWS8 449 aa17.37■□□□□ 0.37
RTN1-209ENST00000611068 CHCHD3Q9NX63 227 aaKnown RBP17.37■□□□□ 0.37
RTN1-209ENST00000611068 CORO1CQ9ULV4 474 aaPredicted RBP17.37■□□□□ 0.37
RTN1-209ENST00000611068 CSADQ9Y600 493 aa17.37■□□□□ 0.37
RTN1-209ENST00000611068 TRAF5O00463 557 aa17.36■□□□□ 0.37
RTN1-209ENST00000611068 AHCYL1O43865 530 aa17.36■□□□□ 0.37
RTN1-209ENST00000611068 PPFIA2O75334 1257 aa17.36■□□□□ 0.37
RTN1-209ENST00000611068 XRCC4Q13426 336 aa17.36■□□□□ 0.37
RTN1-209ENST00000611068 BAATQ14032 418 aaPredicted RBP17.36■□□□□ 0.37
RTN1-209ENST00000611068 GNPTABQ3T906 1256 aa17.36■□□□□ 0.37
RTN1-209ENST00000611068 CEP55Q53EZ4 464 aa17.36■□□□□ 0.37
RTN1-209ENST00000611068 SPATA1Q5VX52 437 aa17.36■□□□□ 0.37
RTN1-209ENST00000611068 KDM7AQ6ZMT4 941 aa17.36■□□□□ 0.37
RTN1-209ENST00000611068 PPFIBP1Q86W92 1011 aa17.36■□□□□ 0.37
RTN1-209ENST00000611068 SYTL5Q8TDW5 730 aaPredicted RBP17.36■□□□□ 0.37
RTN1-209ENST00000611068 CDCA5Q96FF9 252 aa17.36■□□□□ 0.37
RTN1-209ENST00000611068 MBOAT7Q96N66 472 aa17.36■□□□□ 0.37
RTN1-209ENST00000611068 ZNF577Q9BSK1 485 aa17.36■□□□□ 0.37
RTN1-209ENST00000611068 NAA15Q9BXJ9 866 aaKnown RBP17.36■□□□□ 0.37
RTN1-209ENST00000611068 TSGA10Q9BZW7 698 aa17.36■□□□□ 0.37
RTN1-209ENST00000611068 RNF146Q9NTX7 359 aa17.36■□□□□ 0.37
RTN1-209ENST00000611068 A6NNZ2 444 aa17.36■□□□□ 0.37
RTN1-209ENST00000611068 ERCC5P28715 1186 aaPredicted RBP17.36■□□□□ 0.37
RTN1-209ENST00000611068 TUBB8Q3ZCM7 444 aa17.36■□□□□ 0.37
RTN1-209ENST00000611068 TMEM119Q4V9L6 283 aa17.36■□□□□ 0.37
RTN1-209ENST00000611068 MAP1SQ66K74 1059 aaPredicted RBP17.36■□□□□ 0.37
RTN1-209ENST00000611068 CCDC47Q96A33 483 aaKnown RBP17.36■□□□□ 0.37
RTN1-209ENST00000611068 SH2D3AQ9BRG2 576 aa17.36■□□□□ 0.37
RTN1-209ENST00000611068 PES1O00541 588 aaKnown RBP17.35■□□□□ 0.37
RTN1-209ENST00000611068 MFAP3LO75121 409 aa17.35■□□□□ 0.37
RTN1-209ENST00000611068 SPATA31C1P0DKV0 1188 aa17.35■□□□□ 0.37
RTN1-209ENST00000611068 PAPOLAP51003 745 aaKnown RBP17.35■□□□□ 0.37
RTN1-209ENST00000611068 FXR1P51114 621 aaKnown RBP eCLIP17.35■□□□□ 0.37
RTN1-209ENST00000611068 COG2Q14746 738 aa17.35■□□□□ 0.37
RTN1-209ENST00000611068 HHATQ5VTY9 493 aa17.35■□□□□ 0.37
RTN1-209ENST00000611068 RNF207Q6ZRF8 634 aa17.35■□□□□ 0.37
RTN1-209ENST00000611068 ANKRD23Q86SG2 305 aa17.35■□□□□ 0.37
RTN1-209ENST00000611068 TRIM58Q8NG06 486 aa17.35■□□□□ 0.37
RTN1-209ENST00000611068 TCP11Q8WWU5 503 aa17.35■□□□□ 0.37
RTN1-209ENST00000611068 ZIM3Q96PE6 472 aa17.35■□□□□ 0.37
RTN1-209ENST00000611068 RUFY1Q96T51 708 aa17.35■□□□□ 0.37
RTN1-209ENST00000611068 NAP1L4Q99733 375 aaKnown RBP17.35■□□□□ 0.37
RTN1-209ENST00000611068 C7orf25Q9BPX7 421 aa17.35■□□□□ 0.37
RTN1-209ENST00000611068 FGFBP2Q9BYJ0 223 aa17.35■□□□□ 0.37
RTN1-209ENST00000611068 VPS16Q9H269 839 aa17.35■□□□□ 0.37
RTN1-209ENST00000611068 PPANQ9NQ55 473 aaKnown RBP17.35■□□□□ 0.37
RTN1-209ENST00000611068 DMGDHQ9UI17 866 aaKnown RBP17.35■□□□□ 0.37
RTN1-209ENST00000611068 GGA2Q9UJY4 613 aa17.35■□□□□ 0.37
RTN1-209ENST00000611068 VAV3Q9UKW4 847 aa17.35■□□□□ 0.37
RTN1-209ENST00000611068 GAS7O60861 476 aa17.35■□□□□ 0.37
RTN1-209ENST00000611068 PLA2G4BP0C869 781 aa17.35■□□□□ 0.37
RTN1-209ENST00000611068 CIITAP33076 1130 aa17.35■□□□□ 0.37
RTN1-209ENST00000611068 HSD17B4P51659 736 aa17.35■□□□□ 0.37
RTN1-209ENST00000611068 AMPD3Q01432 767 aa17.35■□□□□ 0.37
RTN1-209ENST00000611068 IFFO1Q0D2I5 559 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms