RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 PLIN2Q99541 437 aa15.85■□□□□ 0.13
CTSA-219ENST00000607841 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.85■□□□□ 0.132e-17■□□□□ 11.1
CTSA-219ENST00000607841 BMP2KQ9NSY1 1161 aaPredicted RBP15.85■□□□□ 0.13
CTSA-219ENST00000607841 CHMP5Q9NZZ3 219 aa15.85■□□□□ 0.13
CTSA-219ENST00000607841 COLQQ9Y215 455 aaPredicted RBP15.85■□□□□ 0.13
CTSA-219ENST00000607841 MYH9P35579 1960 aaKnown RBP15.85■□□□□ 0.13
CTSA-219ENST00000607841 EFCAB14O75071 495 aa15.84■□□□□ 0.13
CTSA-219ENST00000607841 BAIAP3O94812 1187 aa15.84■□□□□ 0.13
CTSA-219ENST00000607841 SSBP05455 408 aaKnown RBP eCLIP15.84■□□□□ 0.13
CTSA-219ENST00000607841 PLA2G4BP0C869 781 aa15.84■□□□□ 0.13
CTSA-219ENST00000607841 GHRP10912 638 aa15.84■□□□□ 0.13
CTSA-219ENST00000607841 IKBKEQ14164 716 aa15.84■□□□□ 0.13
CTSA-219ENST00000607841 TFDP1Q14186 410 aa15.84■□□□□ 0.13
CTSA-219ENST00000607841 LPIN1Q14693 890 aa15.84■□□□□ 0.13
CTSA-219ENST00000607841 SHHQ15465 462 aa15.84■□□□□ 0.13
CTSA-219ENST00000607841 PLEKHG4Q58EX7 1191 aa15.84■□□□□ 0.13
CTSA-219ENST00000607841 RRAGBQ5VZM2 374 aa15.84■□□□□ 0.13
CTSA-219ENST00000607841 SYT2Q8N9I0 419 aaPredicted RBP15.84■□□□□ 0.13
CTSA-219ENST00000607841 LEO1Q8WVC0 666 aaPredicted RBP15.84■□□□□ 0.13
CTSA-219ENST00000607841 PRPF31Q8WWY3 499 aaKnown RBP15.84■□□□□ 0.13
CTSA-219ENST00000607841 HERVK_113Q902F9 699 aa15.84■□□□□ 0.13
CTSA-219ENST00000607841 IPO9Q96P70 1041 aaKnown RBP15.84■□□□□ 0.13
CTSA-219ENST00000607841 OSMRQ99650 979 aa15.84■□□□□ 0.13
CTSA-219ENST00000607841 TIPINQ9BVW5 301 aa15.84■□□□□ 0.13
CTSA-219ENST00000607841 IFIH1Q9BYX4 1025 aaKnown RBP15.84■□□□□ 0.13
CTSA-219ENST00000607841 GCOM2Q9BZD3 368 aaPredicted RBP15.84■□□□□ 0.13
CTSA-219ENST00000607841 INO80BQ9C086 356 aaPredicted RBP15.84■□□□□ 0.13
CTSA-219ENST00000607841 ADAMTS10Q9H324 1103 aa15.84■□□□□ 0.13
CTSA-219ENST00000607841 XPNPEP1Q9NQW7 623 aa15.84■□□□□ 0.13
CTSA-219ENST00000607841 FAM13BQ9NYF5 915 aa15.84■□□□□ 0.13
CTSA-219ENST00000607841 KCND2Q9NZV8 630 aa15.84■□□□□ 0.13
CTSA-219ENST00000607841 PCDHA7Q9UN72 937 aa15.84■□□□□ 0.13
CTSA-219ENST00000607841 COL4A3BPQ9Y5P4 624 aa15.84■□□□□ 0.13
CTSA-219ENST00000607841 LTBP2Q14767 1821 aa15.83■□□□□ 0.12
CTSA-219ENST00000607841 ABHD14A-ACY1A0A1B0GW23 586 aa15.83■□□□□ 0.12
CTSA-219ENST00000607841 GPR182O15218 404 aa15.83■□□□□ 0.12
CTSA-219ENST00000607841 RPS6KA5O75582 802 aa15.83■□□□□ 0.12
CTSA-219ENST00000607841 PLCG1P19174 1290 aa15.83■□□□□ 0.12
CTSA-219ENST00000607841 EIF4BP23588 611 aaKnown RBP15.83■□□□□ 0.12
CTSA-219ENST00000607841 ARL2P36404 184 aa15.83■□□□□ 0.12
CTSA-219ENST00000607841 LAMTOR4Q0VGL1 99 aa15.83■□□□□ 0.12
CTSA-219ENST00000607841 PAK2Q13177 524 aa15.83■□□□□ 0.12
CTSA-219ENST00000607841 FAM102BQ5T8I3 360 aa15.83■□□□□ 0.12
CTSA-219ENST00000607841 USP49Q70CQ1 688 aa15.83■□□□□ 0.12
CTSA-219ENST00000607841 MAEAQ7L5Y9 396 aa15.83■□□□□ 0.12
CTSA-219ENST00000607841 OTOP2Q7RTS6 562 aa15.83■□□□□ 0.12
CTSA-219ENST00000607841 KCNK18Q7Z418 384 aa15.83■□□□□ 0.12
CTSA-219ENST00000607841 DBF4BQ8NFT6 615 aa15.83■□□□□ 0.12
CTSA-219ENST00000607841 VWCEQ96DN2 955 aa15.83■□□□□ 0.12
CTSA-219ENST00000607841 RNPC3Q96LT9 517 aaKnown RBP15.83■□□□□ 0.12
CTSA-219ENST00000607841 NLRP4Q96MN2 994 aa15.83■□□□□ 0.12
CTSA-219ENST00000607841 PPP1R16BQ96T49 567 aa15.83■□□□□ 0.12
CTSA-219ENST00000607841 STK17AQ9UEE5 414 aa15.83■□□□□ 0.12
CTSA-219ENST00000607841 KAT6AQ92794 2004 aa15.83■□□□□ 0.12
CTSA-219ENST00000607841 CEP290O15078 2479 aa15.83■□□□□ 0.12
CTSA-219ENST00000607841 A0A087WZ62 844 aa15.82■□□□□ 0.12
CTSA-219ENST00000607841 ZBBXA8MT70 800 aa15.82■□□□□ 0.12
CTSA-219ENST00000607841 SRGAP2CP0DJJ0 459 aa15.82■□□□□ 0.12
CTSA-219ENST00000607841 POU5F1BQ06416 359 aa15.82■□□□□ 0.12
CTSA-219ENST00000607841 C9orf50Q5SZB4 431 aa15.82■□□□□ 0.12
CTSA-219ENST00000607841 AXDND1Q5T1B0 1012 aaPredicted RBP15.82■□□□□ 0.12
CTSA-219ENST00000607841 RINT1Q6NUQ1 792 aa15.82■□□□□ 0.12
CTSA-219ENST00000607841 RAD54LQ92698 747 aa15.82■□□□□ 0.12
CTSA-219ENST00000607841 KIFAP3Q92845 792 aa15.82■□□□□ 0.12
CTSA-219ENST00000607841 FDXACB1Q9BRP7 624 aaPredicted RBP15.82■□□□□ 0.12
CTSA-219ENST00000607841 PYM1Q9BRP8 204 aaKnown RBP15.82■□□□□ 0.12
CTSA-219ENST00000607841 FTHL17Q9BXU8 183 aa15.82■□□□□ 0.12
CTSA-219ENST00000607841 POLR3FQ9H1D9 316 aaPredicted RBP15.82■□□□□ 0.12
CTSA-219ENST00000607841 CDHR5Q9HBB8 845 aa15.82■□□□□ 0.12
CTSA-219ENST00000607841 KCNG1Q9UIX4 513 aa15.82■□□□□ 0.12
CTSA-219ENST00000607841 DARSP14868 501 aaKnown RBP15.81■□□□□ 0.12
CTSA-219ENST00000607841 GUCY2CP25092 1073 aa15.81■□□□□ 0.12
CTSA-219ENST00000607841 CD52P31358 61 aa15.81■□□□□ 0.12
CTSA-219ENST00000607841 STAT6P42226 847 aa15.81■□□□□ 0.12
CTSA-219ENST00000607841 KCNJ6P48051 423 aa15.81■□□□□ 0.12
CTSA-219ENST00000607841 SLC12A3P55017 1021 aa15.81■□□□□ 0.12
CTSA-219ENST00000607841 NFX1Q12986 1120 aaKnown RBP15.81■□□□□ 0.12
CTSA-219ENST00000607841 PPP2R5AQ15172 486 aa15.81■□□□□ 0.12
CTSA-219ENST00000607841 ADALQ6DHV7 355 aa15.81■□□□□ 0.12
CTSA-219ENST00000607841 SHC4Q6S5L8 630 aa15.81■□□□□ 0.12
CTSA-219ENST00000607841 C1orf186Q6ZWK4 172 aa15.81■□□□□ 0.12
CTSA-219ENST00000607841 KSR1Q8IVT5 923 aa15.81■□□□□ 0.12
CTSA-219ENST00000607841 RNF149Q8NC42 400 aa15.81■□□□□ 0.12
CTSA-219ENST00000607841 LARP4BQ92615 738 aaKnown RBP15.81■□□□□ 0.12
CTSA-219ENST00000607841 IFT74Q96LB3 600 aa15.81■□□□□ 0.12
CTSA-219ENST00000607841 DRC1Q96MC2 740 aa15.81■□□□□ 0.12
CTSA-219ENST00000607841 AGO3Q9H9G7 860 aaKnown RBP15.81■□□□□ 0.12
CTSA-219ENST00000607841 PADI3Q9ULW8 664 aa15.81■□□□□ 0.12
CTSA-219ENST00000607841 NOC2LQ9Y3T9 749 aaKnown RBP15.81■□□□□ 0.12
CTSA-219ENST00000607841 SLC4A7Q9Y6M7 1214 aa15.81■□□□□ 0.12
CTSA-219ENST00000607841 TRIP12Q14669 1992 aaPredicted RBP15.8■□□□□ 0.12
CTSA-219ENST00000607841 SFPQP23246 707 aaKnown RBP eCLIP15.8■□□□□ 0.12
CTSA-219ENST00000607841 GLRA2P23416 452 aa15.8■□□□□ 0.12
CTSA-219ENST00000607841 PHKA2P46019 1235 aa15.8■□□□□ 0.12
CTSA-219ENST00000607841 PCBP1Q15365 356 aaKnown RBP eCLIP15.8■□□□□ 0.12
CTSA-219ENST00000607841 CSPP1Q1MSJ5 1256 aa15.8■□□□□ 0.12
CTSA-219ENST00000607841 RASIP1Q5U651 963 aa15.8■□□□□ 0.12
CTSA-219ENST00000607841 RESP18Q5W5W9 173 aa15.8■□□□□ 0.12
CTSA-219ENST00000607841 SV2BQ7L1I2 683 aa15.8■□□□□ 0.12
CTSA-219ENST00000607841 SRGAP1Q7Z6B7 1085 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms