RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 TCP11Q8WWU5 503 aa16.12■□□□□ 0.17
PKNOX1-210ENST00000607049 HLA-CQ95604 372 aa16.12■□□□□ 0.17
PKNOX1-210ENST00000607049 ZNF689Q96CS4 500 aaPredicted RBP16.12■□□□□ 0.17
PKNOX1-210ENST00000607049 MRPL38Q96DV4 380 aaKnown RBP16.12■□□□□ 0.17
PKNOX1-210ENST00000607049 ASB2Q96Q27 587 aa16.12■□□□□ 0.17
PKNOX1-210ENST00000607049 ADAMTS10Q9H324 1103 aa16.12■□□□□ 0.17
PKNOX1-210ENST00000607049 TMX1Q9H3N1 280 aa16.12■□□□□ 0.17
PKNOX1-210ENST00000607049 AAASQ9NRG9 546 aa16.12■□□□□ 0.17
PKNOX1-210ENST00000607049 COL4A6Q14031 1691 aa16.11■□□□□ 0.17
PKNOX1-210ENST00000607049 DARSP14868 501 aaKnown RBP16.11■□□□□ 0.17
PKNOX1-210ENST00000607049 MCM7P33993 719 aa16.11■□□□□ 0.17
PKNOX1-210ENST00000607049 NAALADL2Q58DX5 795 aa16.11■□□□□ 0.17
PKNOX1-210ENST00000607049 RHPN2Q8IUC4 686 aa16.11■□□□□ 0.17
PKNOX1-210ENST00000607049 ERMNQ8TAM6 284 aa16.11■□□□□ 0.17
PKNOX1-210ENST00000607049 PSPC1Q8WXF1 523 aaKnown RBP16.11■□□□□ 0.17
PKNOX1-210ENST00000607049 LINC01599Q8WXQ3 324 aa16.11■□□□□ 0.17
PKNOX1-210ENST00000607049 CLP1Q92989 425 aaKnown RBP16.11■□□□□ 0.17
PKNOX1-210ENST00000607049 KIF2CQ99661 725 aa16.11■□□□□ 0.17
PKNOX1-210ENST00000607049 LMAN2LQ9H0V9 348 aa16.11■□□□□ 0.17
PKNOX1-210ENST00000607049 ELAC1Q9H777 363 aaKnown RBP16.11■□□□□ 0.17
PKNOX1-210ENST00000607049 TMEM161AQ9NX61 479 aa16.11■□□□□ 0.17
PKNOX1-210ENST00000607049 IGKV6-21A0A0C4DH24 114 aa16.1■□□□□ 0.17
PKNOX1-210ENST00000607049 C5orf67F2Z3F1 127 aa16.1■□□□□ 0.17
PKNOX1-210ENST00000607049 STBD1O95210 358 aa16.1■□□□□ 0.17
PKNOX1-210ENST00000607049 TRAPPC10P48553 1259 aa16.1■□□□□ 0.17
PKNOX1-210ENST00000607049 CYP4A11Q02928 519 aa16.1■□□□□ 0.17
PKNOX1-210ENST00000607049 ST3GAL1Q11201 340 aa16.1■□□□□ 0.17
PKNOX1-210ENST00000607049 PAN2Q504Q3 1202 aaKnown RBP16.1■□□□□ 0.17
PKNOX1-210ENST00000607049 XKR9Q5GH70 373 aa16.1■□□□□ 0.17
PKNOX1-210ENST00000607049 PLA2G4FQ68DD2 849 aa16.1■□□□□ 0.17
PKNOX1-210ENST00000607049 PPP2R3CQ969Q6 453 aa16.1■□□□□ 0.17
PKNOX1-210ENST00000607049 DYDC2Q96IM9 177 aa16.1■□□□□ 0.17
PKNOX1-210ENST00000607049 EIF2AK1Q9BQI3 630 aaKnown RBP16.1■□□□□ 0.17
PKNOX1-210ENST00000607049 SH2D3AQ9BRG2 576 aa16.1■□□□□ 0.17
PKNOX1-210ENST00000607049 COL25A1Q9BXS0 654 aaPredicted RBP16.1■□□□□ 0.17
PKNOX1-210ENST00000607049 RC3H2Q9HBD1 1191 aaKnown RBP16.1■□□□□ 0.17
PKNOX1-210ENST00000607049 PRDM6Q9NQX0 595 aa16.1■□□□□ 0.17
PKNOX1-210ENST00000607049 CHST12Q9NRB3 414 aa16.1■□□□□ 0.17
PKNOX1-210ENST00000607049 PCDHB12Q9Y5F1 795 aa16.1■□□□□ 0.17
PKNOX1-210ENST00000607049 PTPRSQ13332 1948 aa16.09■□□□□ 0.17
PKNOX1-210ENST00000607049 TMEM150BA6NC51 233 aa16.09■□□□□ 0.17
PKNOX1-210ENST00000607049 C9IYK1 514 aa16.09■□□□□ 0.17
PKNOX1-210ENST00000607049 ASAP2O43150 1006 aa16.09■□□□□ 0.17
PKNOX1-210ENST00000607049 NCK2O43639 380 aa16.09■□□□□ 0.17
PKNOX1-210ENST00000607049 SKIP12755 728 aa16.09■□□□□ 0.17
PKNOX1-210ENST00000607049 NPEPPSP55786 919 aa16.09■□□□□ 0.17
PKNOX1-210ENST00000607049 CTTNQ14247 550 aaKnown RBP16.09■□□□□ 0.17
PKNOX1-210ENST00000607049 CSPP1Q1MSJ5 1256 aa16.09■□□□□ 0.17
PKNOX1-210ENST00000607049 NOSTRINQ8IVI9 506 aa16.09■□□□□ 0.17
PKNOX1-210ENST00000607049 P2RX5Q93086 422 aa16.09■□□□□ 0.17
PKNOX1-210ENST00000607049 ZNF668Q96K58 619 aaPredicted RBP16.09■□□□□ 0.17
PKNOX1-210ENST00000607049 NLRP4Q96MN2 994 aa16.09■□□□□ 0.17
PKNOX1-210ENST00000607049 RGL1Q9NZL6 768 aa16.09■□□□□ 0.17
PKNOX1-210ENST00000607049 PRRC2BQ5JSZ5 2229 aaKnown RBP16.09■□□□□ 0.17
PKNOX1-210ENST00000607049 A0A087WZ62 844 aa16.08■□□□□ 0.16
PKNOX1-210ENST00000607049 TBKBP1A7MCY6 615 aa16.08■□□□□ 0.16
PKNOX1-210ENST00000607049 MGEA5O60502 916 aa16.08■□□□□ 0.16
PKNOX1-210ENST00000607049 SLITRK3O94933 977 aa16.08■□□□□ 0.16
PKNOX1-210ENST00000607049 FAM189BP81408 668 aa16.08■□□□□ 0.16
PKNOX1-210ENST00000607049 SPIRE1Q08AE8 756 aa16.08■□□□□ 0.16
PKNOX1-210ENST00000607049 NCBP1Q09161 790 aaKnown RBP16.08■□□□□ 0.16
PKNOX1-210ENST00000607049 TTC38Q5R3I4 469 aa16.08■□□□□ 0.16
PKNOX1-210ENST00000607049 CATSPER4Q7RTX7 472 aa16.08■□□□□ 0.16
PKNOX1-210ENST00000607049 CRIPAKQ8N1N5 446 aa16.08■□□□□ 0.16
PKNOX1-210ENST00000607049 RSPH1Q8WYR4 309 aa16.08■□□□□ 0.16
PKNOX1-210ENST00000607049 MTMR9Q96QG7 549 aa16.08■□□□□ 0.16
PKNOX1-210ENST00000607049 MTRQ99707 1265 aa16.08■□□□□ 0.16
PKNOX1-210ENST00000607049 FDXACB1Q9BRP7 624 aaPredicted RBP16.08■□□□□ 0.16
PKNOX1-210ENST00000607049 RAB34Q9BZG1 259 aa16.08■□□□□ 0.16
PKNOX1-210ENST00000607049 NSUN3Q9H649 340 aaKnown RBP16.08■□□□□ 0.16
PKNOX1-210ENST00000607049 ANKEF1Q9NU02 776 aa16.08■□□□□ 0.16
PKNOX1-210ENST00000607049 COL4A3BPQ9Y5P4 624 aa16.08■□□□□ 0.16
PKNOX1-210ENST00000607049 MRPL42Q9Y6G3 142 aaKnown RBP16.08■□□□□ 0.16
PKNOX1-210ENST00000607049 A0A0C4DFX4 3053 aa16.08■□□□□ 0.16
PKNOX1-210ENST00000607049 TTC3P53804 2025 aa16.07■□□□□ 0.16
PKNOX1-210ENST00000607049 CHD7Q9P2D1 2997 aa16.07■□□□□ 0.16
PKNOX1-210ENST00000607049 H3BQV1 296 aa16.07■□□□□ 0.16
PKNOX1-210ENST00000607049 LYPLA2O95372 231 aa16.07■□□□□ 0.16
PKNOX1-210ENST00000607049 EOMESO95936 686 aa16.07■□□□□ 0.16
PKNOX1-210ENST00000607049 OR52Z1P0C646 297 aa16.07■□□□□ 0.16
PKNOX1-210ENST00000607049 XRCC6P12956 609 aaKnown RBP eCLIP16.07■□□□□ 0.16
PKNOX1-210ENST00000607049 DRP2Q13474 957 aa16.07■□□□□ 0.16
PKNOX1-210ENST00000607049 TFDP1Q14186 410 aa16.07■□□□□ 0.16
PKNOX1-210ENST00000607049 DSC3Q14574 896 aa16.07■□□□□ 0.16
PKNOX1-210ENST00000607049 MXD4Q14582 209 aaPredicted RBP16.07■□□□□ 0.16
PKNOX1-210ENST00000607049 EMC2Q15006 297 aa16.07■□□□□ 0.16
PKNOX1-210ENST00000607049 TWF2Q6IBS0 349 aaKnown RBP16.07■□□□□ 0.16
PKNOX1-210ENST00000607049 RNF169Q8NCN4 708 aa16.07■□□□□ 0.16
PKNOX1-210ENST00000607049 CEP89Q96ST8 783 aa16.07■□□□□ 0.16
PKNOX1-210ENST00000607049 HSD17B14Q9BPX1 270 aa16.07■□□□□ 0.16
PKNOX1-210ENST00000607049 TMEM117Q9H0C3 514 aa16.07■□□□□ 0.16
PKNOX1-210ENST00000607049 DHX33Q9H6R0 707 aaKnown RBP16.07■□□□□ 0.16
PKNOX1-210ENST00000607049 STK24Q9Y6E0 443 aa16.07■□□□□ 0.16
PKNOX1-210ENST00000607049 EVPLQ92817 2033 aa16.06■□□□□ 0.16
PKNOX1-210ENST00000607049 SIP14410 1827 aa16.06■□□□□ 0.16
PKNOX1-210ENST00000607049 A0A0U1RQF3 1178 aa16.06■□□□□ 0.16
PKNOX1-210ENST00000607049 RBAK-RBAKDNI3L0D1 243 aa16.06■□□□□ 0.16
PKNOX1-210ENST00000607049 DGAT1O75907 488 aa16.06■□□□□ 0.16
PKNOX1-210ENST00000607049 SRGAP2CP0DJJ0 459 aa16.06■□□□□ 0.16
PKNOX1-210ENST00000607049 LAG3P18627 525 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms