RNA–Protein interactions for RNA: ENST00000604975.1

TPM2-207, Transcript of tropomyosin 2, humanhuman

TSL 5

Gene TPM2, Length 573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-207ENST00000604975 TMEM40Q8WWA1 233 aa16.09■□□□□ 0.17
TPM2-207ENST00000604975 TOP1MTQ969P6 601 aa16.09■□□□□ 0.17
TPM2-207ENST00000604975 TMEM143Q96AN5 459 aa16.09■□□□□ 0.17
TPM2-207ENST00000604975 NLRP4Q96MN2 994 aa16.09■□□□□ 0.17
TPM2-207ENST00000604975 INO80BQ9C086 356 aaPredicted RBP16.09■□□□□ 0.17
TPM2-207ENST00000604975 ATP6V0A4Q9HBG4 840 aa16.09■□□□□ 0.17
TPM2-207ENST00000604975 INSL6Q9Y581 213 aa16.09■□□□□ 0.17
TPM2-207ENST00000604975 LAMA3Q16787 3333 aa16.08■□□□□ 0.17
TPM2-207ENST00000604975 DENND3A2RUS2 1198 aa16.08■□□□□ 0.16
TPM2-207ENST00000604975 RBAK-RBAKDNI3L0D1 243 aa16.08■□□□□ 0.16
TPM2-207ENST00000604975 PDIA4P13667 645 aaKnown RBP16.08■□□□□ 0.16
TPM2-207ENST00000604975 DARSP14868 501 aaKnown RBP16.08■□□□□ 0.16
TPM2-207ENST00000604975 ARL6IP4Q66PJ3 421 aaKnown RBP16.08■□□□□ 0.16
TPM2-207ENST00000604975 POTEGQ6S5H5 508 aa16.08■□□□□ 0.16
TPM2-207ENST00000604975 IGSF22Q8N9C0 903 aa16.08■□□□□ 0.16
TPM2-207ENST00000604975 YME1L1Q96TA2 773 aa16.08■□□□□ 0.16
TPM2-207ENST00000604975 RNF216Q9NWF9 866 aaPredicted RBP16.08■□□□□ 0.16
TPM2-207ENST00000604975 DBR1Q9UK59 544 aaKnown RBP16.08■□□□□ 0.16
TPM2-207ENST00000604975 MTMR6Q9Y217 621 aa16.08■□□□□ 0.16
TPM2-207ENST00000604975 COL4A3BPQ9Y5P4 624 aa16.08■□□□□ 0.16
TPM2-207ENST00000604975 A0A087WWV3 80 aa16.07■□□□□ 0.16
TPM2-207ENST00000604975 A0A087WZ62 844 aa16.07■□□□□ 0.16
TPM2-207ENST00000604975 ARHGEF35A5YM69 484 aa16.07■□□□□ 0.16
TPM2-207ENST00000604975 VWA3AA6NCI4 1184 aa16.07■□□□□ 0.16
TPM2-207ENST00000604975 ASAP2O43150 1006 aa16.07■□□□□ 0.16
TPM2-207ENST00000604975 USO1O60763 962 aaKnown RBP16.07■□□□□ 0.16
TPM2-207ENST00000604975 STAG3L1P0CL83 205 aa16.07■□□□□ 0.16
TPM2-207ENST00000604975 ZSCAN20P17040 1043 aaPredicted RBP16.07■□□□□ 0.16
TPM2-207ENST00000604975 IBSPP21815 317 aaPredicted RBP16.07■□□□□ 0.16
TPM2-207ENST00000604975 SFPQP23246 707 aaKnown RBP eCLIP16.07■□□□□ 0.16
TPM2-207ENST00000604975 RESTQ13127 1097 aa16.07■□□□□ 0.16
TPM2-207ENST00000604975 FDXACB1Q9BRP7 624 aaPredicted RBP16.07■□□□□ 0.16
TPM2-207ENST00000604975 TSPYL2Q9H2G4 693 aaPredicted RBP16.07■□□□□ 0.16
TPM2-207ENST00000604975 ZSCAN16Q9H4T2 348 aaPredicted RBP16.07■□□□□ 0.16
TPM2-207ENST00000604975 C1orf112Q9NSG2 853 aa16.07■□□□□ 0.16
TPM2-207ENST00000604975 LRFN2Q9ULH4 789 aa16.07■□□□□ 0.16
TPM2-207ENST00000604975 SRGAP2CP0DJJ0 459 aa16.06■□□□□ 0.16
TPM2-207ENST00000604975 TFDP1Q14186 410 aa16.06■□□□□ 0.16
TPM2-207ENST00000604975 MXD4Q14582 209 aaPredicted RBP16.06■□□□□ 0.16
TPM2-207ENST00000604975 GRIN2CQ14957 1233 aa16.06■□□□□ 0.16
TPM2-207ENST00000604975 SF3A1Q15459 793 aaKnown RBP16.06■□□□□ 0.16
TPM2-207ENST00000604975 ZRSR1Q15695 479 aaKnown RBP16.06■□□□□ 0.16
TPM2-207ENST00000604975 NPAS4Q8IUM7 802 aa16.06■□□□□ 0.16
TPM2-207ENST00000604975 KSR1Q8IVT5 923 aa16.06■□□□□ 0.16
TPM2-207ENST00000604975 MCPH1Q8NEM0 835 aa16.06■□□□□ 0.16
TPM2-207ENST00000604975 PRPF31Q8WWY3 499 aaKnown RBP16.06■□□□□ 0.16
TPM2-207ENST00000604975 LINC01599Q8WXQ3 324 aa16.06■□□□□ 0.16
TPM2-207ENST00000604975 CDK5RAP3Q96JB5 506 aa16.06■□□□□ 0.16
TPM2-207ENST00000604975 GUCD1Q96NT3 240 aa16.06■□□□□ 0.16
TPM2-207ENST00000604975 GAS2L1Q99501 681 aaPredicted RBP16.06■□□□□ 0.16
TPM2-207ENST00000604975 CDX2Q99626 313 aaPredicted RBP16.06■□□□□ 0.16
TPM2-207ENST00000604975 ADAM2Q99965 735 aa16.06■□□□□ 0.16
TPM2-207ENST00000604975 TMX1Q9H3N1 280 aa16.06■□□□□ 0.16
TPM2-207ENST00000604975 KIAA1024Q9UPX6 916 aa16.06■□□□□ 0.16
TPM2-207ENST00000604975 PP2D1A8MPX8 630 aa16.05■□□□□ 0.16
TPM2-207ENST00000604975 SARSP49591 514 aaKnown RBP16.05■□□□□ 0.16
TPM2-207ENST00000604975 HTRA4P83105 476 aaPredicted RBP16.05■□□□□ 0.16
TPM2-207ENST00000604975 LAMTOR4Q0VGL1 99 aa16.05■□□□□ 0.16
TPM2-207ENST00000604975 IL17AQ16552 155 aa16.05■□□□□ 0.16
TPM2-207ENST00000604975 PADI6Q6TGC4 694 aa16.05■□□□□ 0.16
TPM2-207ENST00000604975 SRGAP1Q7Z6B7 1085 aa16.05■□□□□ 0.16
TPM2-207ENST00000604975 RTN4RL1Q86UN2 441 aaPredicted RBP16.05■□□□□ 0.16
TPM2-207ENST00000604975 SPRYD3Q8NCJ5 442 aa16.05■□□□□ 0.16
TPM2-207ENST00000604975 PRDM12Q9H4Q4 367 aa16.05■□□□□ 0.16
TPM2-207ENST00000604975 XPNPEP1Q9NQW7 623 aa16.05■□□□□ 0.16
TPM2-207ENST00000604975 DDX19AQ9NUU7 478 aaKnown RBP16.05■□□□□ 0.16
TPM2-207ENST00000604975 DNM3Q9UQ16 869 aa16.05■□□□□ 0.16
TPM2-207ENST00000604975 STXBP5LQ9Y2K9 1186 aa16.05■□□□□ 0.16
TPM2-207ENST00000604975 PCDHB7Q9Y5E2 793 aa16.05■□□□□ 0.16
TPM2-207ENST00000604975 LCHNA4D1U4 455 aa16.04■□□□□ 0.16
TPM2-207ENST00000604975 FOSL2P15408 326 aa16.04■□□□□ 0.16
TPM2-207ENST00000604975 FGFR4P22455 802 aa16.04■□□□□ 0.16
TPM2-207ENST00000604975 PHKA2P46019 1235 aa16.04■□□□□ 0.16
TPM2-207ENST00000604975 TAP1Q03518 808 aa16.04■□□□□ 0.16
TPM2-207ENST00000604975 SLC24A5Q71RS6 500 aa16.04■□□□□ 0.16
TPM2-207ENST00000604975 MAEAQ7L5Y9 396 aa16.04■□□□□ 0.16
TPM2-207ENST00000604975 CATSPER4Q7RTX7 472 aa16.04■□□□□ 0.16
TPM2-207ENST00000604975 RNF149Q8NC42 400 aa16.04■□□□□ 0.16
TPM2-207ENST00000604975 MYLIPQ8WY64 445 aa16.04■□□□□ 0.16
TPM2-207ENST00000604975 ARNTL2Q8WYA1 636 aa16.04■□□□□ 0.16
TPM2-207ENST00000604975 AK8Q96MA6 479 aa16.04■□□□□ 0.16
TPM2-207ENST00000604975 NT5C3AQ9H0P0 336 aa16.04■□□□□ 0.16
TPM2-207ENST00000604975 POLR3FQ9H1D9 316 aaPredicted RBP16.04■□□□□ 0.16
TPM2-207ENST00000604975 CERS4Q9HA82 394 aa16.04■□□□□ 0.16
TPM2-207ENST00000604975 RGS18Q9NS28 235 aa16.04■□□□□ 0.16
TPM2-207ENST00000604975 MGEA5O60502 916 aa16.03■□□□□ 0.16
TPM2-207ENST00000604975 CSDE1O75534 798 aaKnown RBP16.03■□□□□ 0.16
TPM2-207ENST00000604975 CDC25AP30304 524 aa16.03■□□□□ 0.16
TPM2-207ENST00000604975 ARL2P36404 184 aa16.03■□□□□ 0.16
TPM2-207ENST00000604975 UBA7P41226 1012 aa16.03■□□□□ 0.16
TPM2-207ENST00000604975 BECN1Q14457 450 aa16.03■□□□□ 0.16
TPM2-207ENST00000604975 ECM1Q16610 540 aa16.03■□□□□ 0.16
TPM2-207ENST00000604975 FAM102BQ5T8I3 360 aa16.03■□□□□ 0.16
TPM2-207ENST00000604975 FAM173BQ6P4H8 233 aa16.03■□□□□ 0.16
TPM2-207ENST00000604975 CABP7Q86V35 215 aa16.03■□□□□ 0.16
TPM2-207ENST00000604975 FIBCD1Q8N539 461 aa16.03■□□□□ 0.16
TPM2-207ENST00000604975 KCTD17Q8N5Z5 321 aa16.03■□□□□ 0.16
TPM2-207ENST00000604975 RASSF8Q8NHQ8 419 aa16.03■□□□□ 0.16
TPM2-207ENST00000604975 CALML4Q96GE6 196 aa16.03■□□□□ 0.16
TPM2-207ENST00000604975 TGS1Q96RS0 853 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms