RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 EVI5O60447 810 aa16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 ECM2O94769 699 aaPredicted RBP16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 AGTP01019 485 aa16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 NR3C1P04150 777 aa16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 CLTAP09496 248 aa16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 TM4SF1P30408 202 aa16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 STAT1P42224 750 aa16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 PTGIRP43119 386 aa16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 FAM133BQ5BKY9 247 aaKnown RBP16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 C6orf118Q5T5N4 469 aa16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 TBC1D1Q86TI0 1168 aaPredicted RBP16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 GLYCTKQ8IVS8 523 aa16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 ADGRF4Q8IZF3 695 aa16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 CCDC24Q8N4L8 307 aa16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 MXD3Q9BW11 206 aa16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 METTL14Q9HCE5 456 aaKnown RBP16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 CNOT7Q9UIV1 285 aaKnown RBP16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 ATF5Q9Y2D1 282 aaPredicted RBP16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 GPR75-ASB3A0A0A6YYF3 556 aa16.52■□□□□ 0.24
LYSMD4-211ENST00000604213 GTPBP10A4D1E9 387 aaKnown RBP16.52■□□□□ 0.24
LYSMD4-211ENST00000604213 SLC16A3O15427 465 aaKnown RBP16.52■□□□□ 0.24
LYSMD4-211ENST00000604213 LMNB1P20700 586 aa16.52■□□□□ 0.24
LYSMD4-211ENST00000604213 PAX7P23759 505 aa16.52■□□□□ 0.24
LYSMD4-211ENST00000604213 RFC4P35249 363 aa16.52■□□□□ 0.24
LYSMD4-211ENST00000604213 SLC8A3P57103 927 aa16.52■□□□□ 0.24
LYSMD4-211ENST00000604213 MAPK7Q13164 816 aa16.52■□□□□ 0.24
LYSMD4-211ENST00000604213 ZNF211Q13398 564 aaPredicted RBP16.52■□□□□ 0.24
LYSMD4-211ENST00000604213 SYT11Q9BT88 431 aa16.52■□□□□ 0.24
LYSMD4-211ENST00000604213 TMEM109Q9BVC6 243 aa16.52■□□□□ 0.24
LYSMD4-211ENST00000604213 ABCF3Q9NUQ8 709 aa16.52■□□□□ 0.24
LYSMD4-211ENST00000604213 CDK5RAP2Q96SN8 1893 aa16.52■□□□□ 0.24
LYSMD4-211ENST00000604213 ASTN1O14525 1302 aa16.52■□□□□ 0.24
LYSMD4-211ENST00000604213 VIMP08670 466 aaKnown RBP16.52■□□□□ 0.23
LYSMD4-211ENST00000604213 SOX5P35711 763 aa16.52■□□□□ 0.23
LYSMD4-211ENST00000604213 TNFAIP8L3Q5GJ75 292 aa16.52■□□□□ 0.23
LYSMD4-211ENST00000604213 EP400NLQ6ZTU2 488 aa16.52■□□□□ 0.23
LYSMD4-211ENST00000604213 PNMA8AQ86V59 439 aaPredicted RBP16.52■□□□□ 0.23
LYSMD4-211ENST00000604213 MAB21L3Q8N8X9 362 aa16.52■□□□□ 0.23
LYSMD4-211ENST00000604213 ALG3Q92685 438 aa16.52■□□□□ 0.23
LYSMD4-211ENST00000604213 ARHGEF26Q96DR7 871 aa16.52■□□□□ 0.23
LYSMD4-211ENST00000604213 REEP2Q9BRK0 252 aa16.52■□□□□ 0.23
LYSMD4-211ENST00000604213 SEMA4AQ9H3S1 761 aa16.52■□□□□ 0.23
LYSMD4-211ENST00000604213 PSMC6P62333 389 aa16.51■□□□□ 0.23
LYSMD4-211ENST00000604213 ADCY2Q08462 1091 aa16.51■□□□□ 0.23
LYSMD4-211ENST00000604213 ZNF268Q14587 947 aaPredicted RBP16.51■□□□□ 0.23
LYSMD4-211ENST00000604213 KIRREL3Q8IZU9 778 aa16.51■□□□□ 0.23
LYSMD4-211ENST00000604213 NSMCE1Q8WV22 266 aa16.51■□□□□ 0.23
LYSMD4-211ENST00000604213 NAP1L4Q99733 375 aaKnown RBP16.51■□□□□ 0.23
LYSMD4-211ENST00000604213 NYXQ9GZU5 481 aa16.51■□□□□ 0.23
LYSMD4-211ENST00000604213 PSTPIP2Q9H939 334 aa16.51■□□□□ 0.23
LYSMD4-211ENST00000604213 TYW1Q9NV66 732 aaKnown RBP16.51■□□□□ 0.23
LYSMD4-211ENST00000604213 VCAM1P19320 739 aa16.51■□□□□ 0.23
LYSMD4-211ENST00000604213 ABCB4P21439 1286 aa16.51■□□□□ 0.23
LYSMD4-211ENST00000604213 ZNF543Q08ER8 600 aa16.51■□□□□ 0.23
LYSMD4-211ENST00000604213 MYO1EQ12965 1108 aa16.51■□□□□ 0.23
LYSMD4-211ENST00000604213 CNGA2Q16280 664 aa16.51■□□□□ 0.23
LYSMD4-211ENST00000604213 BMT2Q1RMZ1 405 aa16.51■□□□□ 0.23
LYSMD4-211ENST00000604213 TTBK2Q6IQ55 1244 aa16.51■□□□□ 0.23
LYSMD4-211ENST00000604213 SMIM5Q71RC9 77 aa16.51■□□□□ 0.23
LYSMD4-211ENST00000604213 LINC00116Q8NCU8 138 aa16.51■□□□□ 0.23
LYSMD4-211ENST00000604213 EPS8L3Q8TE67 593 aaKnown RBP16.51■□□□□ 0.23
LYSMD4-211ENST00000604213 CTNNBL1Q8WYA6 563 aaPredicted RBP16.51■□□□□ 0.23
LYSMD4-211ENST00000604213 BORCS6Q96GS4 357 aa16.51■□□□□ 0.23
LYSMD4-211ENST00000604213 RSRC1Q96IZ7 334 aaKnown RBP16.51■□□□□ 0.23
LYSMD4-211ENST00000604213 L3MBTL3Q96JM7 780 aaPredicted RBP16.51■□□□□ 0.23
LYSMD4-211ENST00000604213 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.51■□□□□ 0.23
LYSMD4-211ENST00000604213 PLIN4Q96Q06 1357 aa16.51■□□□□ 0.23
LYSMD4-211ENST00000604213 ARFGEF1Q9Y6D6 1849 aa16.51■□□□□ 0.23
LYSMD4-211ENST00000604213 CLGNO14967 610 aa16.5■□□□□ 0.23
LYSMD4-211ENST00000604213 OAS1P00973 400 aaKnown RBP16.5■□□□□ 0.23
LYSMD4-211ENST00000604213 ALADP13716 330 aa16.5■□□□□ 0.23
LYSMD4-211ENST00000604213 RPL13P26373 211 aaKnown RBP16.5■□□□□ 0.23
LYSMD4-211ENST00000604213 RPL21P46778 160 aaKnown RBP16.5■□□□□ 0.23
LYSMD4-211ENST00000604213 RHBDL3P58872 404 aa16.5■□□□□ 0.23
LYSMD4-211ENST00000604213 NAA25Q14CX7 972 aa16.5■□□□□ 0.23
LYSMD4-211ENST00000604213 CROCCP2Q86T23 111 aa16.5■□□□□ 0.23
LYSMD4-211ENST00000604213 CATSPER3Q86XQ3 398 aa16.5■□□□□ 0.23
LYSMD4-211ENST00000604213 CLEC10AQ8IUN9 316 aa16.5■□□□□ 0.23
LYSMD4-211ENST00000604213 CCHCR1Q8TD31 782 aa16.5■□□□□ 0.23
LYSMD4-211ENST00000604213 C18orf8Q96DM3 657 aa16.5■□□□□ 0.23
LYSMD4-211ENST00000604213 NSRP1Q9H0G5 558 aaKnown RBP16.5■□□□□ 0.23
LYSMD4-211ENST00000604213 ANKIB1Q9P2G1 1089 aa16.5■□□□□ 0.23
LYSMD4-211ENST00000604213 RASAL2Q9UJF2 1139 aa16.5■□□□□ 0.23
LYSMD4-211ENST00000604213 C15orf41Q9Y2V0 281 aa16.5■□□□□ 0.23
LYSMD4-211ENST00000604213 IGKV6D-41A0A0C4DH26 115 aa16.5■□□□□ 0.23
LYSMD4-211ENST00000604213 SNX3O60493 162 aa16.5■□□□□ 0.23
LYSMD4-211ENST00000604213 UBOX5O94941 541 aa16.5■□□□□ 0.23
LYSMD4-211ENST00000604213 ANP32DO95626 131 aa16.5■□□□□ 0.23
LYSMD4-211ENST00000604213 RARAP10276 462 aa16.5■□□□□ 0.23
LYSMD4-211ENST00000604213 NQO1P15559 274 aaKnown RBP16.5■□□□□ 0.23
LYSMD4-211ENST00000604213 IFNAR2P48551 515 aa16.5■□□□□ 0.23
LYSMD4-211ENST00000604213 EIF6P56537 245 aaKnown RBP16.5■□□□□ 0.23
LYSMD4-211ENST00000604213 NCALDP61601 193 aa16.5■□□□□ 0.23
LYSMD4-211ENST00000604213 PABPC4Q13310 644 aaKnown RBP eCLIP16.5■□□□□ 0.23
LYSMD4-211ENST00000604213 CLUL1Q15846 466 aa16.5■□□□□ 0.23
LYSMD4-211ENST00000604213 AADACL2Q6P093 401 aa16.5■□□□□ 0.23
LYSMD4-211ENST00000604213 BTNL9Q6UXG8 535 aa16.5■□□□□ 0.23
LYSMD4-211ENST00000604213 NBPF5PQ86XG9 351 aaPredicted RBP16.5■□□□□ 0.23
LYSMD4-211ENST00000604213 SYT2Q8N9I0 419 aaPredicted RBP16.5■□□□□ 0.23
LYSMD4-211ENST00000604213 UHMK1Q8TAS1 419 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms