RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 DSC3Q14574 896 aa20.31■□□□□ 0.84
CCDC12-208ENST00000603885 EPHA7Q15375 998 aa20.31■□□□□ 0.84
CCDC12-208ENST00000603885 NCAPH2Q6IBW4 605 aa20.31■□□□□ 0.84
CCDC12-208ENST00000603885 CCDC83Q8IWF9 413 aa20.31■□□□□ 0.84
CCDC12-208ENST00000603885 JPH2Q9BR39 696 aaPredicted RBP20.31■□□□□ 0.84
CCDC12-208ENST00000603885 UBE2ZQ9H832 354 aaPredicted RBP20.31■□□□□ 0.84
CCDC12-208ENST00000603885 TNFRSF10AO00220 468 aa20.3■□□□□ 0.84
CCDC12-208ENST00000603885 GRM6O15303 877 aa20.3■□□□□ 0.84
CCDC12-208ENST00000603885 MAFO75444 373 aaPredicted RBP20.3■□□□□ 0.84
CCDC12-208ENST00000603885 ZSCAN20P17040 1043 aaPredicted RBP20.3■□□□□ 0.84
CCDC12-208ENST00000603885 DRP2Q13474 957 aa20.3■□□□□ 0.84
CCDC12-208ENST00000603885 SAFBQ15424 915 aaKnown RBP eCLIP20.3■□□□□ 0.84
CCDC12-208ENST00000603885 PLA2G4FQ68DD2 849 aa20.3■□□□□ 0.84
CCDC12-208ENST00000603885 P2RX5Q93086 422 aa20.3■□□□□ 0.84
CCDC12-208ENST00000603885 ZSCAN31Q96LW9 406 aaPredicted RBP20.3■□□□□ 0.84
CCDC12-208ENST00000603885 LLPHQ9BRT6 129 aaKnown RBP20.3■□□□□ 0.84
CCDC12-208ENST00000603885 LXNQ9BS40 222 aa20.3■□□□□ 0.84
CCDC12-208ENST00000603885 NSUN3Q9H649 340 aaKnown RBP20.3■□□□□ 0.84
CCDC12-208ENST00000603885 ELAC1Q9H777 363 aaKnown RBP20.3■□□□□ 0.84
CCDC12-208ENST00000603885 CYP26B1Q9NR63 512 aa20.3■□□□□ 0.84
CCDC12-208ENST00000603885 TMEM161AQ9NX61 479 aa20.3■□□□□ 0.84
CCDC12-208ENST00000603885 MUC3AQ02505 3323 aa20.3■□□□□ 0.84
CCDC12-208ENST00000603885 FAM189BP81408 668 aa20.29■□□□□ 0.84
CCDC12-208ENST00000603885 SPIRE1Q08AE8 756 aa20.29■□□□□ 0.84
CCDC12-208ENST00000603885 CALCRLQ16602 461 aa20.29■□□□□ 0.84
CCDC12-208ENST00000603885 NAALADL2Q58DX5 795 aa20.29■□□□□ 0.84
CCDC12-208ENST00000603885 GCOM2Q9BZD3 368 aaPredicted RBP20.29■□□□□ 0.84
CCDC12-208ENST00000603885 ATP6V0A4Q9HBG4 840 aa20.29■□□□□ 0.84
CCDC12-208ENST00000603885 SUCLA2Q9P2R7 463 aaPredicted RBP20.29■□□□□ 0.84
CCDC12-208ENST00000603885 PPME1Q9Y570 386 aa20.29■□□□□ 0.84
CCDC12-208ENST00000603885 TCF20Q9UGU0 1960 aaKnown RBP20.28■□□□□ 0.84
CCDC12-208ENST00000603885 BDP1A6H8Y1 2624 aa20.28■□□□□ 0.84
CCDC12-208ENST00000603885 KIAA1671Q9BY89 1806 aa20.28■□□□□ 0.84
CCDC12-208ENST00000603885 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.28■□□□□ 0.84
CCDC12-208ENST00000603885 TBKBP1A7MCY6 615 aa20.28■□□□□ 0.84
CCDC12-208ENST00000603885 NEMFO60524 1076 aa20.28■□□□□ 0.84
CCDC12-208ENST00000603885 TCEAL5Q5H9L2 206 aa20.28■□□□□ 0.84
CCDC12-208ENST00000603885 FAM102BQ5T8I3 360 aa20.28■□□□□ 0.84
CCDC12-208ENST00000603885 ZNF410Q86VK4 478 aa20.28■□□□□ 0.84
CCDC12-208ENST00000603885 C4orf19Q8IY42 314 aa20.28■□□□□ 0.84
CCDC12-208ENST00000603885 EXOC8Q8IYI6 725 aa20.28■□□□□ 0.84
CCDC12-208ENST00000603885 SLC7A3Q8WY07 619 aa20.28■□□□□ 0.84
CCDC12-208ENST00000603885 CEP170P1Q96L14 293 aa20.28■□□□□ 0.84
CCDC12-208ENST00000603885 KIF2CQ99661 725 aa20.28■□□□□ 0.84
CCDC12-208ENST00000603885 SH2B1Q9NRF2 756 aaPredicted RBP20.28■□□□□ 0.84
CCDC12-208ENST00000603885 WRAP73Q9P2S5 460 aaPredicted RBP20.28■□□□□ 0.84
CCDC12-208ENST00000603885 PCDHA12Q9UN75 941 aa20.28■□□□□ 0.84
CCDC12-208ENST00000603885 PLAGL2Q9UPG8 496 aa20.28■□□□□ 0.84
CCDC12-208ENST00000603885 MYO7AQ13402 2215 aa20.27■□□□□ 0.84
CCDC12-208ENST00000603885 FNDC1Q4ZHG4 1894 aaPredicted RBP20.27■□□□□ 0.84
CCDC12-208ENST00000603885 A0A087WZ62 844 aa20.27■□□□□ 0.84
CCDC12-208ENST00000603885 HOXA2O43364 376 aa20.27■□□□□ 0.84
CCDC12-208ENST00000603885 YWHABP31946 246 aaKnown RBP20.27■□□□□ 0.84
CCDC12-208ENST00000603885 POLGP54098 1239 aaPredicted RBP20.27■□□□□ 0.84
CCDC12-208ENST00000603885 NPEPPSP55786 919 aa20.27■□□□□ 0.84
CCDC12-208ENST00000603885 GUCY1B3Q02153 619 aa20.27■□□□□ 0.84
CCDC12-208ENST00000603885 SPOUT1Q5T280 376 aaKnown RBP20.27■□□□□ 0.84
CCDC12-208ENST00000603885 OTUD6AQ7L8S5 288 aa20.27■□□□□ 0.84
CCDC12-208ENST00000603885 RHPN2Q8IUC4 686 aa20.27■□□□□ 0.84
CCDC12-208ENST00000603885 DYDC2Q96IM9 177 aa20.27■□□□□ 0.84
CCDC12-208ENST00000603885 C8orf76Q96K31 380 aa20.27■□□□□ 0.84
CCDC12-208ENST00000603885 FDXACB1Q9BRP7 624 aaPredicted RBP20.27■□□□□ 0.84
CCDC12-208ENST00000603885 ZSWIM4Q9H7M6 989 aa20.27■□□□□ 0.84
CCDC12-208ENST00000603885 ALG13Q9NP73 1137 aaKnown RBP20.27■□□□□ 0.84
CCDC12-208ENST00000603885 AAASQ9NRG9 546 aa20.27■□□□□ 0.84
CCDC12-208ENST00000603885 RGL1Q9NZL6 768 aa20.27■□□□□ 0.84
CCDC12-208ENST00000603885 FGFR1P11362 822 aa20.26■□□□□ 0.83
CCDC12-208ENST00000603885 FGFR4P22455 802 aa20.26■□□□□ 0.83
CCDC12-208ENST00000603885 KCNA5P22460 613 aa20.26■□□□□ 0.83
CCDC12-208ENST00000603885 SFPQP23246 707 aaKnown RBP eCLIP20.26■□□□□ 0.83
CCDC12-208ENST00000603885 RFC5P40937 340 aa20.26■□□□□ 0.83
CCDC12-208ENST00000603885 HMGN5P82970 282 aaKnown RBP20.26■□□□□ 0.83
CCDC12-208ENST00000603885 CYP4A11Q02928 519 aa20.26■□□□□ 0.83
CCDC12-208ENST00000603885 CTTNQ14247 550 aaKnown RBP20.26■□□□□ 0.83
CCDC12-208ENST00000603885 KLHL23Q8NBE8 558 aa20.26■□□□□ 0.83
CCDC12-208ENST00000603885 INO80BQ9C086 356 aaPredicted RBP20.26■□□□□ 0.83
CCDC12-208ENST00000603885 TTC12Q9H892 705 aaPredicted RBP20.26■□□□□ 0.83
CCDC12-208ENST00000603885 DACT1Q9NYF0 836 aa20.26■□□□□ 0.83
CCDC12-208ENST00000603885 PCDHB12Q9Y5F1 795 aa20.26■□□□□ 0.83
CCDC12-208ENST00000603885 WNT7AO00755 349 aa20.25■□□□□ 0.83
CCDC12-208ENST00000603885 NCK2O43639 380 aa20.25■□□□□ 0.83
CCDC12-208ENST00000603885 CSDE1O75534 798 aaKnown RBP20.25■□□□□ 0.83
CCDC12-208ENST00000603885 CSPG5O95196 566 aa20.25■□□□□ 0.83
CCDC12-208ENST00000603885 ITGB1P05556 798 aa20.25■□□□□ 0.83
CCDC12-208ENST00000603885 RBM25P49756 843 aaKnown RBP20.25■□□□□ 0.83
CCDC12-208ENST00000603885 LEXMQ3ZCV2 418 aa20.25■□□□□ 0.83
CCDC12-208ENST00000603885 ECHDC2Q86YB7 292 aa20.25■□□□□ 0.83
CCDC12-208ENST00000603885 TPH2Q8IWU9 490 aa20.25■□□□□ 0.83
CCDC12-208ENST00000603885 ABI1Q8IZP0 508 aa20.25■□□□□ 0.83
CCDC12-208ENST00000603885 ZNF579Q8NAF0 562 aaKnown RBP20.25■□□□□ 0.83
CCDC12-208ENST00000603885 NEK9Q8TD19 979 aa20.25■□□□□ 0.83
CCDC12-208ENST00000603885 PABPC5Q96DU9 382 aaKnown RBP20.25■□□□□ 0.83
CCDC12-208ENST00000603885 NLRP4Q96MN2 994 aa20.25■□□□□ 0.83
CCDC12-208ENST00000603885 NECAB3Q96P71 396 aaPredicted RBP20.25■□□□□ 0.83
CCDC12-208ENST00000603885 EIF2AK1Q9BQI3 630 aaKnown RBP20.25■□□□□ 0.83
CCDC12-208ENST00000603885 TMEM117Q9H0C3 514 aa20.25■□□□□ 0.83
CCDC12-208ENST00000603885 DHX33Q9H6R0 707 aaKnown RBP20.25■□□□□ 0.83
CCDC12-208ENST00000603885 CHST12Q9NRB3 414 aa20.25■□□□□ 0.83
CCDC12-208ENST00000603885 ATG2AQ2TAZ0 1938 aa20.24■□□□□ 0.83
CCDC12-208ENST00000603885 GAS2O43903 313 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms