RNA–Protein interactions for RNA: ENST00000603639.5

NEB-218, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 25,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-218ENST00000603639 ABCB5Q2M3G0 1257 aa3.62□□□□□ -1.83
NEB-218ENST00000603639 C1orf228Q6PIY5 440 aa3.62□□□□□ -1.83
NEB-218ENST00000603639 TRIM50Q86XT4 487 aa3.62□□□□□ -1.83
NEB-218ENST00000603639 PTCD3Q96EY7 689 aaKnown RBP3.62□□□□□ -1.83
NEB-218ENST00000603639 ZNF232Q9UNY5 417 aa3.62□□□□□ -1.83
NEB-218ENST00000603639 GSTK1Q9Y2Q3 226 aa3.62□□□□□ -1.83
NEB-218ENST00000603639 GARSP41250 739 aaKnown RBP3.61□□□□□ -1.83
NEB-218ENST00000603639 POLGP54098 1239 aaPredicted RBP3.61□□□□□ -1.83
NEB-218ENST00000603639 RAD23BP54727 409 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 KLHL12Q53G59 568 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 OSBPL8Q9BZF1 889 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 QPCTLQ9NXS2 382 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 GPATCH8Q9UKJ3 1502 aaKnown RBP3.61□□□□□ -1.83
NEB-218ENST00000603639 YWHAEP62258 255 aaKnown RBP3.61□□□□□ -1.83
NEB-218ENST00000603639 TRIM69Q86WT6 500 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 ZNF555Q8NEP9 628 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 TUBB1Q9H4B7 451 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 SUCOQ9UBS9 1254 aaKnown RBP3.61□□□□□ -1.83
NEB-218ENST00000603639 KDM2BQ8NHM5 1336 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 PLK4O00444 970 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 VDRP11473 427 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 HMOX2P30519 316 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 ZBED5Q49AG3 693 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 MGARPQ8TDB4 240 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 CPSF3Q9UKF6 684 aaKnown RBP3.61□□□□□ -1.83
NEB-218ENST00000603639 PABPC1P11940 636 aaKnown RBP3.61□□□□□ -1.83
NEB-218ENST00000603639 R3HDM1Q15032 1099 aaKnown RBP3.61□□□□□ -1.83
NEB-218ENST00000603639 ARMC3Q5W041 872 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 TTBK2Q6IQ55 1244 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 GET4Q7L5D6 327 aaPredicted RBP3.61□□□□□ -1.83
NEB-218ENST00000603639 ZFAND2BQ8WV99 257 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 PPP1R2P1Q96PQ5 205 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 PLEKHG3A1L390 1219 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 PEX1O43933 1283 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 RARGP13631 454 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 MCM7P33993 719 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 KRT71Q3SY84 523 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 PPP1R37O75864 691 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 TRIM16LQ309B1 348 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 BEND6Q5SZJ8 279 aaPredicted RBP3.61□□□□□ -1.83
NEB-218ENST00000603639 FERMT3Q86UX7 667 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 LINS1Q8NG48 757 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 ERVK-7P63135 1459 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 IGF2BP3O00425 579 aaKnown RBP eCLIP3.61□□□□□ -1.83
NEB-218ENST00000603639 GRK2P25098 689 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 GTF2H1P32780 548 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 GJC2Q5T442 439 aaPredicted RBP3.61□□□□□ -1.83
NEB-218ENST00000603639 DARS2Q6PI48 645 aaKnown RBP3.61□□□□□ -1.83
NEB-218ENST00000603639 HDDC2Q7Z4H3 204 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 SLC26A7Q8TE54 656 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 TRIM47Q96LD4 638 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 TAS2R1Q9NYW7 299 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 DDX20Q9UHI6 824 aaKnown RBP3.61□□□□□ -1.83
NEB-218ENST00000603639 SYNGAP1Q96PV0 1343 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 TSC22D2O75157 780 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 RASSF9O75901 435 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 ZAP70P43403 619 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 TAF1DQ9H5J8 278 aaPredicted RBP3.61□□□□□ -1.83
NEB-218ENST00000603639 TMEM110-MUSTN1A8MSY1 372 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 CHRM1P11229 460 aaPredicted RBP3.61□□□□□ -1.83
NEB-218ENST00000603639 RAPGEF1Q13905 1077 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 ZNF568Q3ZCX4 644 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 UTS2BQ765I0 119 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 TMEM110Q86TL2 294 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 ZC3H12CQ9C0D7 883 aaKnown RBP3.61□□□□□ -1.83
NEB-218ENST00000603639 NSMCE4AQ9NXX6 385 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 THRAP3Q9Y2W1 955 aaKnown RBP3.61□□□□□ -1.83
NEB-218ENST00000603639 CES2O00748 559 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 KDM6BO15054 1643 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 MAGOHP61326 146 aaKnown RBP3.61□□□□□ -1.83
NEB-218ENST00000603639 C14orf93Q9H972 538 aaKnown RBP3.61□□□□□ -1.83
NEB-218ENST00000603639 CBY1Q9Y3M2 126 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 SMIM23A6NLE4 172 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 AGBL1Q96MI9 1066 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 UBE2TQ9NPD8 197 aaPredicted RBP3.61□□□□□ -1.83
NEB-218ENST00000603639 C8orf74Q6P047 294 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 TTC33Q6PID6 262 aaPredicted RBP3.61□□□□□ -1.83
NEB-218ENST00000603639 TRIM65Q6PJ69 517 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 ZBED2Q9BTP6 218 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 LSG1Q9H089 658 aaKnown RBP3.61□□□□□ -1.83
NEB-218ENST00000603639 ECT2Q9H8V3 914 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 SNAP47Q5SQN1 464 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 JADE1Q6IE81 842 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 NEK8Q86SG6 692 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 PROM2Q8N271 834 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 C1orf232A0A0U1RR37 186 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 PRDM1O75626 825 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 MECOMQ03112 1051 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 ZNF268Q14587 947 aaPredicted RBP3.61□□□□□ -1.83
NEB-218ENST00000603639 ZSCAN29Q8IWY8 852 aaPredicted RBP3.61□□□□□ -1.83
NEB-218ENST00000603639 ERP44Q9BS26 406 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 CACNA2D2Q9NY47 1150 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 SMARCAL1Q9NZC9 954 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 MKLN1Q9UL63 735 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 EXOC6BQ9Y2D4 811 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 SAMM50Q9Y512 469 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 AGTP01019 485 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 TAC1P20366 129 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 EXOC3L1Q86VI1 746 aa3.61□□□□□ -1.83
NEB-218ENST00000603639 ZNF75CPQ92670 426 aaPredicted RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms