RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 LMCD1Q9NZU5 365 aa10.25□□□□□ -0.77
CSMD1-217ENST00000602723 KIAA1841Q6NSI8 718 aa10.24□□□□□ -0.77
CSMD1-217ENST00000602723 DPP9Q86TI2 863 aa10.24□□□□□ -0.77
CSMD1-217ENST00000602723 ARHGAP18Q8N392 663 aa10.24□□□□□ -0.77
CSMD1-217ENST00000602723 CCNYL1Q8N7R7 359 aa10.24□□□□□ -0.77
CSMD1-217ENST00000602723 MB21D1Q8N884 522 aa10.24□□□□□ -0.77
CSMD1-217ENST00000602723 TTC8Q8TAM2 541 aa10.24□□□□□ -0.77
CSMD1-217ENST00000602723 ETNK1Q9HBU6 452 aa10.24□□□□□ -0.77
CSMD1-217ENST00000602723 CCDC85BQ15834 202 aaPredicted RBP10.24□□□□□ -0.77
CSMD1-217ENST00000602723 TAGAPQ8N103 731 aa10.24□□□□□ -0.77
CSMD1-217ENST00000602723 CATSPER1Q8NEC5 780 aa10.24□□□□□ -0.77
CSMD1-217ENST00000602723 CEP72Q9P209 647 aa10.24□□□□□ -0.77
CSMD1-217ENST00000602723 PSAPP07602 524 aa10.24□□□□□ -0.77
CSMD1-217ENST00000602723 CDC25AP30304 524 aa10.24□□□□□ -0.77
CSMD1-217ENST00000602723 KRT33BQ14525 404 aa10.24□□□□□ -0.77
CSMD1-217ENST00000602723 RPF1Q9H9Y2 349 aaKnown RBP10.24□□□□□ -0.77
CSMD1-217ENST00000602723 SNX24Q9Y343 169 aa10.24□□□□□ -0.77
CSMD1-217ENST00000602723 GRID2IPA4D2P6 1211 aa10.24□□□□□ -0.77
CSMD1-217ENST00000602723 KRT14P02533 472 aa10.24□□□□□ -0.77
CSMD1-217ENST00000602723 KCNA1Q09470 495 aa10.24□□□□□ -0.77
CSMD1-217ENST00000602723 ERICH1Q86X53 443 aa10.24□□□□□ -0.77
CSMD1-217ENST00000602723 ADD3Q9UEY8 706 aaKnown RBP10.24□□□□□ -0.77
CSMD1-217ENST00000602723 PIK3R2O00459 728 aa10.24□□□□□ -0.77
CSMD1-217ENST00000602723 NFRKBQ6P4R8 1299 aa10.24□□□□□ -0.77
CSMD1-217ENST00000602723 PROM2Q8N271 834 aa10.24□□□□□ -0.77
CSMD1-217ENST00000602723 ZBTB12Q9Y330 459 aaPredicted RBP10.24□□□□□ -0.77
CSMD1-217ENST00000602723 XDHP47989 1333 aa10.24□□□□□ -0.77
CSMD1-217ENST00000602723 PDE8BO95263 885 aa10.24□□□□□ -0.77
CSMD1-217ENST00000602723 ATP6V1G3Q96LB4 118 aa10.24□□□□□ -0.77
CSMD1-217ENST00000602723 NGRNQ9NPE2 291 aaKnown RBP10.24□□□□□ -0.77
CSMD1-217ENST00000602723 CYP21A2P08686 494 aa10.24□□□□□ -0.77
CSMD1-217ENST00000602723 HADHAP40939 763 aa10.24□□□□□ -0.77
CSMD1-217ENST00000602723 MRPS15P82914 257 aaKnown RBP10.24□□□□□ -0.77
CSMD1-217ENST00000602723 LRRC8BQ6P9F7 803 aa10.24□□□□□ -0.77
CSMD1-217ENST00000602723 GREM2Q9H772 168 aa10.24□□□□□ -0.77
CSMD1-217ENST00000602723 CHCHD3Q9NX63 227 aaKnown RBP10.24□□□□□ -0.77
CSMD1-217ENST00000602723 DONSONQ9NYP3 566 aa10.24□□□□□ -0.77
CSMD1-217ENST00000602723 KLHL8Q9P2G9 620 aaPredicted RBP10.24□□□□□ -0.77
CSMD1-217ENST00000602723 SPHKAPQ2M3C7 1700 aa10.24□□□□□ -0.77
CSMD1-217ENST00000602723 SRGAP2CP0DJJ0 459 aa10.24□□□□□ -0.77
CSMD1-217ENST00000602723 GFPT1Q06210 699 aaPredicted RBP10.24□□□□□ -0.77
CSMD1-217ENST00000602723 IMPG1Q17R60 797 aa10.24□□□□□ -0.77
CSMD1-217ENST00000602723 ARMCX2Q7L311 632 aa10.24□□□□□ -0.77
CSMD1-217ENST00000602723 FAM98CQ17RN3 349 aaKnown RBP10.24□□□□□ -0.77
CSMD1-217ENST00000602723 SYDE2Q5VT97 1194 aa10.24□□□□□ -0.77
CSMD1-217ENST00000602723 CCDC17Q96LX7 622 aa10.24□□□□□ -0.77
CSMD1-217ENST00000602723 SH3GL3Q99963 347 aa10.24□□□□□ -0.77
CSMD1-217ENST00000602723 KANSL2Q9H9L4 492 aa10.24□□□□□ -0.77
CSMD1-217ENST00000602723 PMS1P54277 932 aaKnown RBP10.23□□□□□ -0.77
CSMD1-217ENST00000602723 OSTNP61366 133 aa10.23□□□□□ -0.77
CSMD1-217ENST00000602723 UNC5CLQ8IV45 518 aa10.23□□□□□ -0.77
CSMD1-217ENST00000602723 RESTQ13127 1097 aa10.23□□□□□ -0.77
CSMD1-217ENST00000602723 CUL4AQ13619 759 aa10.23□□□□□ -0.77
CSMD1-217ENST00000602723 ZC3H12BQ5HYM0 836 aaKnown RBP10.23□□□□□ -0.77
CSMD1-217ENST00000602723 PASD1Q8IV76 773 aa10.23□□□□□ -0.77
CSMD1-217ENST00000602723 PIGSQ96S52 555 aa10.23□□□□□ -0.77
CSMD1-217ENST00000602723 OSBPL3Q9H4L5 887 aa10.23□□□□□ -0.77
CSMD1-217ENST00000602723 DDX28Q9NUL7 540 aaKnown RBP10.23□□□□□ -0.77
CSMD1-217ENST00000602723 ADAM22Q9P0K1 906 aa10.23□□□□□ -0.77
CSMD1-217ENST00000602723 FAM95CA0A1B0GW59 222 aa10.23□□□□□ -0.77
CSMD1-217ENST00000602723 ANKRD65E5RJM6 399 aa10.23□□□□□ -0.77
CSMD1-217ENST00000602723 NR3C1P04150 777 aa10.23□□□□□ -0.77
CSMD1-217ENST00000602723 SKOR1P84550 965 aa10.23□□□□□ -0.77
CSMD1-217ENST00000602723 ARID5BQ14865 1188 aa10.23□□□□□ -0.77
CSMD1-217ENST00000602723 KLC4Q9NSK0 619 aa10.23□□□□□ -0.77
CSMD1-217ENST00000602723 PNMA6FA0A0J9YX94 578 aa10.23□□□□□ -0.77
CSMD1-217ENST00000602723 ENAHQ8N8S7 591 aaPredicted RBP10.23□□□□□ -0.77
CSMD1-217ENST00000602723 PRPF3O43395 683 aaKnown RBP10.23□□□□□ -0.77
CSMD1-217ENST00000602723 CIITAP33076 1130 aa10.23□□□□□ -0.77
CSMD1-217ENST00000602723 AARSP49588 968 aaKnown RBP eCLIP10.23□□□□□ -0.77
CSMD1-217ENST00000602723 MECOMQ03112 1051 aa10.23□□□□□ -0.77
CSMD1-217ENST00000602723 PPP4R4Q6NUP7 873 aa10.23□□□□□ -0.77
CSMD1-217ENST00000602723 CYP4F11Q9HBI6 524 aa10.23□□□□□ -0.77
CSMD1-217ENST00000602723 TLR7Q9NYK1 1049 aaKnown RBP10.23□□□□□ -0.77
CSMD1-217ENST00000602723 ARHGAP26Q9UNA1 814 aa10.23□□□□□ -0.77
CSMD1-217ENST00000602723 MAP3K15Q6ZN16 1313 aa10.23□□□□□ -0.77
CSMD1-217ENST00000602723 AP1B1Q10567 949 aa10.23□□□□□ -0.77
CSMD1-217ENST00000602723 DTNBP1Q96EV8 351 aa10.23□□□□□ -0.77
CSMD1-217ENST00000602723 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.23□□□□□ -0.771e-7■□□□□ 9.3
CSMD1-217ENST00000602723 SH3GLB2Q9NR46 395 aa10.23□□□□□ -0.77
CSMD1-217ENST00000602723 HEY1Q9Y5J3 304 aa10.23□□□□□ -0.77
CSMD1-217ENST00000602723 SLC16A2P36021 539 aa10.23□□□□□ -0.77
CSMD1-217ENST00000602723 PMS2P54278 862 aa10.23□□□□□ -0.77
CSMD1-217ENST00000602723 EPAS1Q99814 870 aa10.23□□□□□ -0.77
CSMD1-217ENST00000602723 EDEM3Q9BZQ6 932 aa10.23□□□□□ -0.77
CSMD1-217ENST00000602723 TTC7AQ9ULT0 858 aaPredicted RBP10.23□□□□□ -0.77
CSMD1-217ENST00000602723 SATB2Q9UPW6 733 aa10.23□□□□□ -0.77
CSMD1-217ENST00000602723 CROCCQ5TZA2 2017 aa10.23□□□□□ -0.77
CSMD1-217ENST00000602723 SLFN12LQ6IEE8 588 aa10.23□□□□□ -0.77
CSMD1-217ENST00000602723 ARMC2Q8NEN0 867 aa10.23□□□□□ -0.77
CSMD1-217ENST00000602723 RUBCNQ92622 972 aa10.23□□□□□ -0.77
CSMD1-217ENST00000602723 SNF8Q96H20 258 aa10.23□□□□□ -0.77
CSMD1-217ENST00000602723 SLC8A2Q9UPR5 921 aa10.23□□□□□ -0.77
CSMD1-217ENST00000602723 ERBB4Q15303 1308 aa10.23□□□□□ -0.77
CSMD1-217ENST00000602723 TARSL2A2RTX5 802 aaKnown RBP10.22□□□□□ -0.77
CSMD1-217ENST00000602723 ANTXR1Q9H6X2 564 aa10.22□□□□□ -0.77
CSMD1-217ENST00000602723 CTIFO43310 598 aaKnown RBP10.22□□□□□ -0.77
CSMD1-217ENST00000602723 ANP32DO95626 131 aa10.22□□□□□ -0.77
CSMD1-217ENST00000602723 CDC42BPGQ6DT37 1551 aa10.22□□□□□ -0.77
CSMD1-217ENST00000602723 TCP11X1B4DZS4 312 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms