RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 ZNF296Q8WUU4 475 aaPredicted RBP19.14■□□□□ 0.65
PPFIA3-207ENST00000602716 C16orf70Q9BSU1 422 aa19.14■□□□□ 0.65
PPFIA3-207ENST00000602716 KIFC3Q9BVG8 833 aa19.14■□□□□ 0.65
PPFIA3-207ENST00000602716 NIFKQ9BYG3 293 aaKnown RBP19.14■□□□□ 0.65
PPFIA3-207ENST00000602716 RNPEPQ9H4A4 650 aa19.14■□□□□ 0.65
PPFIA3-207ENST00000602716 OLFML3Q9NRN5 406 aa19.14■□□□□ 0.65
PPFIA3-207ENST00000602716 SRRDQ9UH36 339 aa19.14■□□□□ 0.65
PPFIA3-207ENST00000602716 GAP43P17677 238 aa19.13■□□□□ 0.65
PPFIA3-207ENST00000602716 STIM1Q13586 685 aa19.13■□□□□ 0.65
PPFIA3-207ENST00000602716 CT47A1Q5JQC4 288 aaPredicted RBP19.13■□□□□ 0.65
PPFIA3-207ENST00000602716 CEP135Q66GS9 1140 aa19.13■□□□□ 0.65
PPFIA3-207ENST00000602716 PDCL2Q8N4E4 241 aa19.13■□□□□ 0.65
PPFIA3-207ENST00000602716 ATP8B4Q8TF62 1192 aa19.13■□□□□ 0.65
PPFIA3-207ENST00000602716 DHTKD1Q96HY7 919 aaPredicted RBP19.13■□□□□ 0.65
PPFIA3-207ENST00000602716 ZMYND15Q9H091 742 aa19.13■□□□□ 0.65
PPFIA3-207ENST00000602716 ZMYM2Q9UBW7 1377 aa19.13■□□□□ 0.65
PPFIA3-207ENST00000602716 CEP350Q5VT06 3117 aa19.13■□□□□ 0.65
PPFIA3-207ENST00000602716 NKRFO15226 690 aaKnown RBP eCLIP19.13■□□□□ 0.65
PPFIA3-207ENST00000602716 GCNT3O95395 438 aa19.13■□□□□ 0.65
PPFIA3-207ENST00000602716 HOXD8P13378 290 aaPredicted RBP19.13■□□□□ 0.65
PPFIA3-207ENST00000602716 NCBP1Q09161 790 aaKnown RBP19.13■□□□□ 0.65
PPFIA3-207ENST00000602716 DRP2Q13474 957 aa19.13■□□□□ 0.65
PPFIA3-207ENST00000602716 ZCWPW2Q504Y3 356 aa19.13■□□□□ 0.65
PPFIA3-207ENST00000602716 CDKAL1Q5VV42 579 aa19.13■□□□□ 0.65
PPFIA3-207ENST00000602716 CENPPQ6IPU0 288 aa19.13■□□□□ 0.65
PPFIA3-207ENST00000602716 SMARCAD1Q9H4L7 1026 aa19.13■□□□□ 0.65
PPFIA3-207ENST00000602716 DHX33Q9H6R0 707 aaKnown RBP19.13■□□□□ 0.65
PPFIA3-207ENST00000602716 ATP6V0A4Q9HBG4 840 aa19.13■□□□□ 0.65
PPFIA3-207ENST00000602716 MYADML2A6NDP7 307 aa19.12■□□□□ 0.65
PPFIA3-207ENST00000602716 DGAT1O75907 488 aa19.12■□□□□ 0.65
PPFIA3-207ENST00000602716 POLGP54098 1239 aaPredicted RBP19.12■□□□□ 0.65
PPFIA3-207ENST00000602716 BEX3Q00994 111 aa19.12■□□□□ 0.65
PPFIA3-207ENST00000602716 IRF2BP1Q8IU81 584 aa19.12■□□□□ 0.65
PPFIA3-207ENST00000602716 FAM178BQ8IXR5 827 aa19.12■□□□□ 0.65
PPFIA3-207ENST00000602716 CCDC112Q8NEF3 446 aa19.12■□□□□ 0.65
PPFIA3-207ENST00000602716 TMEM143Q96AN5 459 aa19.12■□□□□ 0.65
PPFIA3-207ENST00000602716 XPO4Q9C0E2 1151 aaKnown RBP19.12■□□□□ 0.65
PPFIA3-207ENST00000602716 KCTD10Q9H3F6 313 aa19.12■□□□□ 0.65
PPFIA3-207ENST00000602716 TRPC6Q9Y210 931 aa19.12■□□□□ 0.65
PPFIA3-207ENST00000602716 MYH9P35579 1960 aaKnown RBP19.12■□□□□ 0.65
PPFIA3-207ENST00000602716 PEX3P56589 373 aa19.12■□□□□ 0.65
PPFIA3-207ENST00000602716 CACNB2Q08289 660 aaPredicted RBP19.12■□□□□ 0.65
PPFIA3-207ENST00000602716 IRF5Q13568 498 aa19.12■□□□□ 0.65
PPFIA3-207ENST00000602716 PTPN21Q16825 1174 aa19.12■□□□□ 0.65
PPFIA3-207ENST00000602716 CCAR2Q8N163 923 aaKnown RBP19.12■□□□□ 0.65
PPFIA3-207ENST00000602716 BBXQ8WY36 941 aaPredicted RBP19.12■□□□□ 0.65
PPFIA3-207ENST00000602716 POLR3FQ9H1D9 316 aaPredicted RBP19.12■□□□□ 0.65
PPFIA3-207ENST00000602716 ADGRA3Q8IWK6 1321 aa19.12■□□□□ 0.65
PPFIA3-207ENST00000602716 K7ENM7 598 aa19.11■□□□□ 0.65
PPFIA3-207ENST00000602716 PLS3P13797 630 aa19.11■□□□□ 0.65
PPFIA3-207ENST00000602716 TPM4P67936 248 aa19.11■□□□□ 0.65
PPFIA3-207ENST00000602716 MFSD14CQ5VZR4 134 aa19.11■□□□□ 0.65
PPFIA3-207ENST00000602716 ASAP3Q8TDY4 903 aa19.11■□□□□ 0.65
PPFIA3-207ENST00000602716 FAM167AQ96KS9 214 aa19.11■□□□□ 0.65
PPFIA3-207ENST00000602716 DRC1Q96MC2 740 aa19.11■□□□□ 0.65
PPFIA3-207ENST00000602716 IFNKQ9P0W0 207 aa19.11■□□□□ 0.65
PPFIA3-207ENST00000602716 FAM184BQ9ULE4 1060 aa19.11■□□□□ 0.65
PPFIA3-207ENST00000602716 CASP8AP2Q9UKL3 1982 aa19.1■□□□□ 0.65
PPFIA3-207ENST00000602716 A6NJR5 290 aa19.1■□□□□ 0.65
PPFIA3-207ENST00000602716 PPP1R37O75864 691 aa19.1■□□□□ 0.65
PPFIA3-207ENST00000602716 HSPA6P17066 643 aa19.1■□□□□ 0.65
PPFIA3-207ENST00000602716 CCND3P30281 292 aaPredicted RBP19.1■□□□□ 0.65
PPFIA3-207ENST00000602716 FANCCQ00597 558 aa19.1■□□□□ 0.65
PPFIA3-207ENST00000602716 PTPN14Q15678 1187 aa19.1■□□□□ 0.65
PPFIA3-207ENST00000602716 BMT2Q1RMZ1 405 aa19.1■□□□□ 0.65
PPFIA3-207ENST00000602716 APTXQ7Z2E3 356 aaKnown RBP19.1■□□□□ 0.65
PPFIA3-207ENST00000602716 ZNF720Q7Z2F6 126 aa19.1■□□□□ 0.65
PPFIA3-207ENST00000602716 NRBP2Q9NSY0 501 aa19.1■□□□□ 0.65
PPFIA3-207ENST00000602716 INTS13Q9NVM9 706 aa19.1■□□□□ 0.65
PPFIA3-207ENST00000602716 SAGE1Q9NXZ1 904 aa19.1■□□□□ 0.65
PPFIA3-207ENST00000602716 ERAP1Q9NZ08 941 aa19.1■□□□□ 0.65
PPFIA3-207ENST00000602716 SEL1LQ9UBV2 794 aa19.1■□□□□ 0.65
PPFIA3-207ENST00000602716 RBAK-RBAKDNI3L0D1 243 aa19.1■□□□□ 0.65
PPFIA3-207ENST00000602716 SLC16A4O15374 487 aa19.1■□□□□ 0.65
PPFIA3-207ENST00000602716 FKTNO75072 461 aa19.1■□□□□ 0.65
PPFIA3-207ENST00000602716 PRKAR2AP13861 404 aaKnown RBP19.1■□□□□ 0.65
PPFIA3-207ENST00000602716 AKR1A1P14550 325 aa19.1■□□□□ 0.65
PPFIA3-207ENST00000602716 MKRN4PQ13434 485 aaPredicted RBP19.1■□□□□ 0.65
PPFIA3-207ENST00000602716 LRRC55Q6ZSA7 311 aa19.1■□□□□ 0.65
PPFIA3-207ENST00000602716 LRRC71Q8N4P6 559 aa19.1■□□□□ 0.65
PPFIA3-207ENST00000602716 CCDC150Q8NCX0 1101 aa19.1■□□□□ 0.65
PPFIA3-207ENST00000602716 STRA6Q9BX79 667 aa19.1■□□□□ 0.65
PPFIA3-207ENST00000602716 SRRTQ9BXP5 876 aaKnown RBP19.1■□□□□ 0.65
PPFIA3-207ENST00000602716 GTPBP4Q9BZE4 634 aaKnown RBP19.1■□□□□ 0.65
PPFIA3-207ENST00000602716 NPTX2P47972 431 aa19.09■□□□□ 0.65
PPFIA3-207ENST00000602716 IGBP1P78318 339 aa19.09■□□□□ 0.65
PPFIA3-207ENST00000602716 CSGALNACT2Q8N6G5 542 aa19.09■□□□□ 0.65
PPFIA3-207ENST00000602716 MCPH1Q8NEM0 835 aa19.09■□□□□ 0.65
PPFIA3-207ENST00000602716 KAT2BQ92831 832 aa19.09■□□□□ 0.65
PPFIA3-207ENST00000602716 TIPINQ9BVW5 301 aa19.09■□□□□ 0.65
PPFIA3-207ENST00000602716 LARSQ9P2J5 1176 aaKnown RBP19.09■□□□□ 0.65
PPFIA3-207ENST00000602716 H3BRB1 525 aa19.08■□□□□ 0.65
PPFIA3-207ENST00000602716 ADCY3O60266 1144 aa19.08■□□□□ 0.65
PPFIA3-207ENST00000602716 PPFIA4O75335 1185 aa19.08■□□□□ 0.65
PPFIA3-207ENST00000602716 INSRRP14616 1297 aa19.08■□□□□ 0.65
PPFIA3-207ENST00000602716 CNGA1P29973 690 aa19.08■□□□□ 0.65
PPFIA3-207ENST00000602716 DGKDQ16760 1214 aa19.08■□□□□ 0.65
PPFIA3-207ENST00000602716 ARMCX5Q6P1M9 558 aa19.08■□□□□ 0.65
PPFIA3-207ENST00000602716 TMC6Q7Z403 805 aa19.08■□□□□ 0.65
PPFIA3-207ENST00000602716 ZNF507Q8TCN5 953 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms